BGIOSGA000200

From RiceWiki
Revision as of 17:56, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA000200

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000200, complete gene.

LocusTag

OSJNBA0052O12.15

Ensembl Transcript ID

BGIOSGA000200-TA

Ensembl Protein ID

BGIOSGA000200-PA

Length

3200

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44644275..44647474

Sequence Coding Region

44647349..44647474,44647184..44647249,44646384..44646472,44646133..44646278,44645915..44646039
,44645745..44645838,44645490..44645653,44645161..44645322,44644953..44645079
,44644712..44644878,44644478..44644585,44644275..44644370

Genome Context

<gbrowseImage1> name=IndicaChromosome01:44644275..44647474 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:44644275..44647474 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGAGGCTGCCCTACGTGACCGCGCTGACCACGCTCTTCAGCTACGGCCTCCTCTTCGCCTTCGGCCAGCTCCGCGACTTCTTCCGCAGGATCCTCGACGCTGGCAAATCCAGCAATCTCAAGGGGTACGCGCCGATTTGCCTTGGGCTGGAGGATTTCTACACGCGCCGCCTCTATCTCCGCATCCAGGACTGTTTTGGCCGGCCAATTGCTAGCGCACCAGATGCTTGGTTTGACGTGGTTGAGCGTTACTCAAATGACAGTAACAAGACACTGCATCGTACCACAAAAACATCTAAGTGCCTTAACTTAGGTTCCTACAACTACCTTGGCTTTGCCGCGGCAGATGAATACTGCACCCCTCGTGTTATTGAGTCACTGAAGAAATACTCTGCTAGTACTTGCAGTGTCCGAGTCGATGGGGGCAACACTAAGCTGCATGTGGAACTTGAAGAGCTGGTTGCAAGATTTGTTGGCAAGCCTGCAGCTATTCTTTTTGGCATGGGTTATGTGACGAACTCTGCAATCATTCCTGCCTTGGTTGGCAAGGGAGGACTCATAATTAGTGACTCATTGAACCATAACTCTATAGTGAATGGGGCTAGGGGTTCAGGAGCTACTGTTCGGGTTTTTCAACATAACAATCCTGCACACTTGGAAGAGGTATTGAGAGAGCAGATTGCAGGAGGCCAGCCTCGTACACACAGGCCGTGGAAGAAGATTATTGTGATTGTTGAGGGAATATATAGCATGGAGGGGGAGCTATGCAAACTCCCTGAGGTTATAGCTGTCTGCAAGAAATATAAGGCTTACACATATTTAGACGAGGCACACAGTATTGGAGCTGTTGGTAAAACCGGGAGAGGTGTTTGTGAGCTACTAGGTGTGGATCCAGCTGATGTCGATATTATGATGGGAACATTTACTAAATCATTTGGATCATGCGGAGGTTACATTGCAGCATCAAAAGAGATTATTGATCATCTGAAGCACATATGCCCTGCCCATATCTATGCAACATCCATGTCACCTCCAGCTGTTCAGCAGGTCATTTCTGCAATAAAAGTTATCCTTGGTGAAGATGGATCTAACAGAGGGGCCAAGAAGCTTGCTCAGATTCGAGAGAACAGCAATTTCTTCCGTTCAGAGCTTCAGAAAATGGGTTTTGAAGTTCTTGGAGACAATGACTCGCCGGTCATGCCTATCATGCTTTACAATCCTGCTAAAATACCTGCATTCTCAAGAGAGTGCCTGAGGCAACACGTTGCTGTTGTTACTGTTGCATTTCCTGCTACACCACTACTGCTTGCCAGAGCTAGGATATGTATCTCAGCTTCCCACTCAAGGGAAGATCTTATTAAAGGATTGGAGGTTATCAGCAAAGTTGGTGACCTCGTGGGAATCAAATACTTCCCAGTGGAACATGAAAAGACTGCATCTGTTGAGAAACTGAAGAAGCTTCAATGA</cdnaseq>

Protein Sequence

<aaseq>MVRLPYVTALTTLFSYGLLFAFGQLRDFFRRILDAGKSSNLKGYAPICLGLEDFYTRRLYLRIQDCFGRPIASAPDAWFDVVERYSNDSNKTLHRTTKTSKCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKPAAILFGMGYVTNSAIIPALVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNNPAHLEEVLREQIAGGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVISAIKVILGEDGSNRGAKKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQHVAVVTVAFPATPLLLARARICISASHSREDLIKGLEVISKVGDLVGIKYFPVEHEKTASVEKLKKLQ</aaseq>

Gene Sequence

<dnaseqindica>1..126#226..291#1003..1091#1197..1342#1436..1560#1637..1730#1822..1985#2153..2314#2396..2522#2597..2763#2890..2997#3105..3200#ATGGTGAGGCTGCCCTACGTGACCGCGCTGACCACGCTCTTCAGCTACGGCCTCCTCTTCGCCTTCGGCCAGCTCCGCGACTTCTTCCGCAGGATCCTCGACGCTGGCAAATCCAGCAATCTCAAGGTTTTTTGATTCTCTCTCTCTCGTTTTCTCTTTTTTTTCTGATTTTTTTTTTGGTTATCTCTCGCTCACTCACGCTGTCCTCCTTGGTGAATTCGTTAGGGGTACGCGCCGATTTGCCTTGGGCTGGAGGATTTCTACACGCGCCGCCTCTATCTCCGCATCCAGGTGAGGTTGCCCTTCCCACCCCCCATTGCCACGATCTCCAGAGCAGCAGAGTTGACTCATGAAAAGTCGAATTTATTTTCCTCCTTTAATTTGGTTGGAAGTGTCACGCGATCGTGTAATGTTGGGTTTGTAAAGGTGGAAAGGCATAAAAGCTAATTTAGTTATTAGTGATTTGTTCCTTTGCAATTTGGTGGAGTATGAGAATAAACAATAGAGTGGCAATTCGCTTTAGCGTCCTCCTATGTACTACTAGATCACATGATGGAGCTTTCCATGTGAAAGATGTATCATCTGAAGCACTTTGATCCCATGAACTAGCTGTTGCAGTGGAATTCACAATCTTTCTCACTTAAAGTTTACAATTAATGGCTGGAAGAAGTGAAACTGCTGTTTCCCTTGAGCATGCTAGTATGAGTAGGAACTAATATCTCTAGTAGCAAAGCGAACTGTCACTCTATCGTGGAGTATGAGAATAAACAATAGAGTGACAGTTCACCCAGATATTAGATATTACACGAAGGAACTAATAATATCTCTAGTCTGACTGTATGAGTAGGAAGTAGGTATTAGTGAACCATATAGGTTGATCACTCCTGCAATGGTAAATTCAGTCTAACTGTATCGTAAGTTCACTGCTTAAACTCTAGAATGATATATTAATCTTTTGTTTGTGTGTCGTTATTGACTTTGTGCTGTCAATTATCATGGCAGGACTGTTTTGGCCGGCCAATTGCTAGCGCACCAGATGCTTGGTTTGACGTGGTTGAGCGTTACTCAAATGACAGTAACAAGACACTGCAGTATGTATTTCTCACATCTGATTCAGCACCTAGTTAGCATAAGAAAATGCTGAATATTATCTTAGGATGCATGCTATTCTCTGATCCAATGCTTCTTCAATGCAGTCGTACCACAAAAACATCTAAGTGCCTTAACTTAGGTTCCTACAACTACCTTGGCTTTGCCGCGGCAGATGAATACTGCACCCCTCGTGTTATTGAGTCACTGAAGAAATACTCTGCTAGTACTTGCAGTGTCCGAGTCGATGGGGGTAGGCACTTATGTTGCTGCTATAGTTTGTTGCCACTGAGTTCTTAAATGATTTAGTGTAGTATATAAGCTTACCTGATTCATACAATCTTAGGCAACACTAAGCTGCATGTGGAACTTGAAGAGCTGGTTGCAAGATTTGTTGGCAAGCCTGCAGCTATTCTTTTTGGCATGGGTTATGTGACGAACTCTGCAATCATTCCTGCCTTGGTTGGCAAGGTCCGTGATAGAGAGACTGCCGTGTTTTCTTTCTATTCTTTTCTACATCCTGGAGCTAATGTATTATTGATTGCAGGGAGGACTCATAATTAGTGACTCATTGAACCATAACTCTATAGTGAATGGGGCTAGGGGTTCAGGAGCTACTGTTCGGGTTTTTCAACATAACAGTAAGCTCACTGATAATTGACAGCTACTCTTGCAAGCGATGAGCTCAACAATGGATCACAATACATAATGCTTCCCTTTATTTTCTTCCAGATCCTGCACACTTGGAAGAGGTATTGAGAGAGCAGATTGCAGGAGGCCAGCCTCGTACACACAGGCCGTGGAAGAAGATTATTGTGATTGTTGAGGGAATATATAGCATGGAGGGGGAGCTATGCAAACTCCCTGAGGTTATAGCTGTCTGCAAGAAATATAAGGTTTGAGAATTTCACTCACCGACTTATGCTCTTTCTTCAGACCATTCGTGTGGGCATGTAGATCTATTTACTGGCATATAAAAACTTCAGCTTTCACCTGCTACTAAAAGAGACAGATGTTTACTGAGTAATTGAGTATTGACTATTGTACTTAACCTTCTGGATAGGCTTACACATATTTAGACGAGGCACACAGTATTGGAGCTGTTGGTAAAACCGGGAGAGGTGTTTGTGAGCTACTAGGTGTGGATCCAGCTGATGTCGATATTATGATGGGAACATTTACTAAATCATTTGGATCATGCGGAGGTTACATTGCAGCATCAAAAGTATGAAGCAGATTCACTTGCTATACTTGGCTGAGCACTGTAGTTGATAAATCTGACCATGGATTATGCTGTGTTTATCAGGAGATTATTGATCATCTGAAGCACATATGCCCTGCCCATATCTATGCAACATCCATGTCACCTCCAGCTGTTCAGCAGGTCATTTCTGCAATAAAAGTTATCCTTGGTGAAGATGGATCTAACAGAGGTATATCAGAACTTGTTGATTTCTTATTTCTTCTGTCTTTAGGAAATTCCTAATGTAATTATTGTTCTAAATAGGGGCCAAGAAGCTTGCTCAGATTCGAGAGAACAGCAATTTCTTCCGTTCAGAGCTTCAGAAAATGGGTTTTGAAGTTCTTGGAGACAATGACTCGCCGGTCATGCCTATCATGCTTTACAATCCTGCTAAAATACCTGCATTCTCAAGAGAGTGCCTGAGGCAACACGTGAGTTTTCAAAATATACCTCACCTAACGAATAAATCATGCTTTAGTTTTGAATCCAGTAGCACACATAATTTCTTCACTGAAAATTCTGCTGTTTGACTAATGTGACATGTTTCATAATTCTAGGTTGCTGTTGTTACTGTTGCATTTCCTGCTACACCACTACTGCTTGCCAGAGCTAGGATATGTATCTCAGCTTCCCACTCAAGGGAAGATCTTATTAAAGGATTGGAGGTAAAGTCCATCCTCCTGTCAATGCTACGGGCTTCATGGCTTGTTGCGACAAGCTTGATTTAGTTGCAAACCACATACAGTTACTAAATTTCATGTTGATTGTTTAGGTTATCAGCAAAGTTGGTGACCTCGTGGGAATCAAATACTTCCCAGTGGAACATGAAAAGACTGCATCTGTTGAGAAACTGAAGAAGCTTCAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000200