BGIOSGA000202

From RiceWiki
Revision as of 17:56, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA000202

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000202, complete gene.

LocusTag

OSJNBA0052O12.11

Ensembl Transcript ID

BGIOSGA000202-TA

Ensembl Protein ID

BGIOSGA000202-PA

Length

4150

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44628920..44633069

Sequence Coding Region

44632911..44633069,44632447..44632512,44631600..44631688,44631311..44631456,44631084..44631208
,44630854..44630947,44630597..44630760,44629910..44630071,44629682..44629808
,44629427..44629593,44629119..44629226,44628920..44629012

Genome Context

<gbrowseImage1> name=IndicaChromosome01:44628920..44633069 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:44628920..44633069 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGATCAAGGTGCCGTACGTGACGGCGGCGACGACGCTGTTCAGCTTCGGCCTCATCTTCGGCTTCGGCCACCTCCGCGACTCCTTCCGCGCCCTTCTCCGCCTCCTCTTCTCCTCCGCCGCCGCCGCCGACTCGCCGGCCGGCTGCAACTCTAAAGGTTACGCGCCGATTTGCGTTGGGAAGGAGGATTTCTACATCCGCCGCTTCTTCCGCCGCGTCCAGGACTGTTTCGGGCGACCGATAGCCAGCAAGCCTGATGCGTGGTTCGATGTGGTTGAGCGCTACTCGACTGACAGCAACAAGACACTGCACCGCACCACGAAAACATCCAAGTGCCTGAACCTGGCATCCTTCAACTACCTAGGTTTCGCTGCTGCTGATGAGTACTGCACACCTCGTGTCATCGAGTCTCTGAAGAAATACTCTGCTAGTACCTGCAGTTCCCGAGTCGATGGAGGCAACACTCAGCTGCACATAGAACTCGAAGAGCTGGTTGCAAGATTCGTCAGGAAGCCTTCGGCTATTCTGCTTGCCATGGGTTATGCCACCAACTCTGCCATCATTCCTGCCTTGATTGGGAAGGGTGGACTGATAATCAGTGATTCACTGAACCATAACTCTATAGTCAGTGGAGCTAGAGCTTCAGGAGCTACGATTCGGGTGTTCGAACACAACAATCCTGCTCACCTGGAAAAACTACTGAGAGAGCAGATTTCAGGTGGACAGCCTAGAACACACAGGGCATGGAAGAAGATCCTGGTGATTGTTGAGGGGATATATAGCATGGAAGGGGAGCTATGCAAACTCCCTGAGATCTTATCTGTCTGCAAGAAGTACAAGGTTTACACATACATGGACGAGGCACACAGTATTGGAGCTGTTGGGAAAACAGGAAGAGGTGTGTGTGAGCTACTAGGAGTGGATCCGGCTGATGTTGACATCATGATGGGCACACTCTCAAAGTCATTTGGATCGAGTGGAGGTTACATTGCAGCATCAAAAGAGATTATTCAGCATCTCAAGCTTACATGTCCTTCACATATCTATGGCACATCCATGTCACCTCCTGCAGTCCAGCAGGTCATCTCTGCAATGAAGGTTATTCTTGGGGAGGATGGAACTGACAGAGGGGCCAAGAAGATTGCTCAGATTAGAGATAACAGCAATTTCTTCCGTTCAGAGCTTCAGAAAATGGGCTTTGAGGTTCTTGGAGATAATGACTCACCTGTCATGCCTTTCATGGTCTACAATCCTGCTAAAATGCCTGCATTCTCAAGAGAGTGCCTGAAGCAAAATGTTGCTGTTGTTCCGGTTGGATTTCCTGCTACACCACTACTTCTTGGCAGAATTAGGATATGCATTTCTGCTTCTCACTCAAGGGAAGATCTTATCAAAGGATTGGAGGTTATCAGCAACGTTGGTGATCTTGTTGGAATCAAGTACTTACCAGTTGAGCAAGAGGAGACTACATCTGTTGAGAAACCAAAGAAGCTTTAG</cdnaseq>

Protein Sequence

<aaseq>MVIKVPYVTAATTLFSFGLIFGFGHLRDSFRALLRLLFSSAAAADSPAGCNSKGYAPICVGKEDFYIRRFFRRVQDCFGRPIASKPDAWFDVVERYSTDSNKTLHRTTKTSKCLNLASFNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGNTQLHIELEELVARFVRKPSAILLAMGYATNSAIIPALIGKGGLIISDSLNHNSIVSGARASGATIRVFEHNNPAHLEKLLREQISGGQPRTHRAWKKILVIVEGIYSMEGELCKLPEILSVCKKYKVYTYMDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTLSKSFGSSGGYIAASKEIIQHLKLTCPSHIYGTSMSPPAVQQVISAMKVILGEDGTDRGAKKIAQIRDNSNFFRSELQKMGFEVLGDNDSPVMPFMVYNPAKMPAFSRECLKQNVAVVPVGFPATPLLLGRIRICISASHSREDLIKGLEVISNVGDLVGIKYLPVEQEETTSVEKPKKL</aaseq>

Gene Sequence

<dnaseqindica>1..159#558..623#1382..1470#1614..1759#1862..1986#2123..2216#2310..2473#2999..3160#3262..3388#3477..3643#3844..3951#4058..4150#ATGGTGATCAAGGTGCCGTACGTGACGGCGGCGACGACGCTGTTCAGCTTCGGCCTCATCTTCGGCTTCGGCCACCTCCGCGACTCCTTCCGCGCCCTTCTCCGCCTCCTCTTCTCCTCCGCCGCCGCCGCCGACTCGCCGGCCGGCTGCAACTCTAAAGTTAATACTCCCTCTATGCCTAATTATAAGGCCTATATCTTTTTACACGGTATTTAATAATATATTTTGATCAGTATTTTATTTTATTCTATAATCCCAACAAATGTAAAATTAAAATCACATGAAAGTATTTCAAAATCTGAATCTAGTGATATAACATGCATAATACTTAGTATAGATATAGTTAGTATGATTATCAGTTAAAAACTACCGAGTTTGATTTTTCTTAAAAATTGACGCCCTATAATTTAGGACGGGTAGTATAATTACCTAAATGCCTGCAGGTTAGCTTAATTGATACTCCCTAGTACTAAGTAATTAGCTTCATTAATTTGTCTCTCGCATTATTGATTATCCTACTTATGTGCTGAGCTGATCTTTTTCGTCTCGCATCACAGGGTTACGCGCCGATTTGCGTTGGGAAGGAGGATTTCTACATCCGCCGCTTCTTCCGCCGCGTCCAGGTGAGCTCACCTTCTTCTCTCTTTCTGTCCAACCATGCAATTTTTTTTCTAATATTAATGCGCAAGAGCCTTACATGTCAATATGTTATATTAGAAAAAAAAAGAAAATTTTATACAATCGTACCATGCTGTAACGGTTAGAAGAGGCATACACAAAGAAAAAAAACCATAAATATTAAAAAATAACCTAATATCAAATAAATAAAAAGGGTAAAACGTTTTAAATCCAGACTAGCTAGCCCACTAACTTATAAAACTAGCCAGAAAACCACTAGAAGTTTCTCATATACACAAAGAGAAAATGACATCAACAGCTAGCAGATAGGCATGACTGCATGAGCCCTGAGCTCCCACCATTCACTCATCCATGCGTATAATTAGTAGAACTAATGTGCTATATGTATTAATCAATTATTACTTACTTAGTTTACTTCCTGTGTTTAAAGTTGCTTTTATTTTTGCTCGGCCCTAAGTTAAACGTATATACTAGCATCTTTGATTATTAGTTTATAGAGAAACCGTATAACTTAAAAACATGTTAATGATATATTATGAAGATATAATTAAAAAAACATAAATGTTATGGTGTTAAATTATATAAATATTTAGGAATTAATAGTTTGATTTACAATAAAGTTAAAACGATAAATAATTTGAAACGAATTATGTACTTACTAACATGCATGGTGAATTATTAATCTCTTTAATTCTCGATCTGTTCTTGTGTTTTTCTGAACGAATTACTGTTCTCGCTGCAGGACTGTTTCGGGCGACCGATAGCCAGCAAGCCTGATGCGTGGTTCGATGTGGTTGAGCGCTACTCGACTGACAGCAACAAGACACTGCAGTATGAATACATTTCTTCTCCTGAATCCCGATTTCATATCTGATTAGCATGCATGATATCCTGATCCAACAATTAACGCTGCACCTCTGAATAACTCTGAATTTCTGATCGATGCAAATGTATATGTCTACATATATATGCAGCCGCACCACGAAAACATCCAAGTGCCTGAACCTGGCATCCTTCAACTACCTAGGTTTCGCTGCTGCTGATGAGTACTGCACACCTCGTGTCATCGAGTCTCTGAAGAAATACTCTGCTAGTACCTGCAGTTCCCGAGTCGATGGAGGTACATTTATATAGCACTTAATTGGTATAGTTTAACTCTGATTAATGATCTAAGTATACTGCTAGCTAGAATTAAGCTTTCGTTTATGTTTATGATCTCAAGGCAACACTCAGCTGCACATAGAACTCGAAGAGCTGGTTGCAAGATTCGTCAGGAAGCCTTCGGCTATTCTGCTTGCCATGGGTTATGCCACCAACTCTGCCATCATTCCTGCCTTGATTGGGAAGGTAATTAGTTTTGTTGTAAATATTTTTTTTTCTAGATAAAGATTTTGTTGTAAATATATATGGAGTCTGTATTTGTTTATTTCTGTTTTTTGTTTCATGCATCCTGGAGCTGATTAATGTACTGTAATTATTTCAGGGTGGACTGATAATCAGTGATTCACTGAACCATAACTCTATAGTCAGTGGAGCTAGAGCTTCAGGAGCTACGATTCGGGTGTTCGAACACAACAGTAAGCTCACAAACAACTGTCAATTGCATTTGCAAGTAATTAGTTATTAGCTGAACAATTCATCTCACCAAATTTCATTAATTTCTTTTGCAGATCCTGCTCACCTGGAAAAACTACTGAGAGAGCAGATTTCAGGTGGACAGCCTAGAACACACAGGGCATGGAAGAAGATCCTGGTGATTGTTGAGGGGATATATAGCATGGAAGGGGAGCTATGCAAACTCCCTGAGATCTTATCTGTCTGCAAGAAGTACAAGGTTAATTGGAGAAATTAATTCCACTTACTACTAAATTTCTGAATTCTTCTTATGTTTCTTAGTTTCATTCTGAACCATACTAGTAAGAAAAGAACAGTAGTACCATCTTTCAGAAAAAGAGAAAAGGGGAAACTTTTGAGGCATTATAATGCTCTTTGCGGGTAGAAGAACAATCTAGACCATTTTTTTCTAATCCAATGAATCATATTTATTTATACTACAACGTCAACTACTGGTAGTAGATTTTTTTTGTACCGGTAGTAGAGCTCATAAATCAAAATCTAAGATCATTTCTATCGACGATAAATACTAAAGAGCATCGTGAAGGTACCCAAAACTTTTACGGTGGTCTCAACTGGTAGTATTTTACTGCCATTATAGTACTACCGATAGATATCAACAAAAGAAAAAAAGAATTCTTCTTCTGGGTATGTTATTACTGGATTTTTTTTCTGAAACTTTTAAGAGTTGTTCAAACTGGTAGGGATGTACTATATGGTATTGACTAGTAAAACATATGAATAGGTTTACACATACATGGACGAGGCACACAGTATTGGAGCTGTTGGGAAAACAGGAAGAGGTGTGTGTGAGCTACTAGGAGTGGATCCGGCTGATGTTGACATCATGATGGGCACACTCTCAAAGTCATTTGGATCGAGTGGAGGTTACATTGCAGCATCAAAAGTATGAATTAATTAAGCAGATTCACTTACCAGTTCTTGTCTGAGAAGACAAAAGAGTTGATAATAAAACTGATCCTTGGATTATTTTTTCATGTTTACCAGGAGATTATTCAGCATCTCAAGCTTACATGTCCTTCACATATCTATGGCACATCCATGTCACCTCCTGCAGTCCAGCAGGTCATCTCTGCAATGAAGGTTATTCTTGGGGAGGATGGAACTGACAGAGGTATATATCTGCTTCCAAAATTTGAACAAATTGACTCATAATTTCTCCTGTTTTGAGGAAATTCATGATGCAATGTTGTTGTAAACAGGGGCCAAGAAGATTGCTCAGATTAGAGATAACAGCAATTTCTTCCGTTCAGAGCTTCAGAAAATGGGCTTTGAGGTTCTTGGAGATAATGACTCACCTGTCATGCCTTTCATGGTCTACAATCCTGCTAAAATGCCTGCATTCTCAAGAGAGTGCCTGAAGCAAAATGTGAGTTTTTTTCAAGTGCACCACAAATCTATTAAAAACCTGATAAAACAATCTTGTCCGTTTAGTAAATCTCTAATGCAAATTTGTCTCAAAATAGTCCAAAGTTTTGTACTATTTGAGTTACACCCTGTAACTCTTTTTTGTGTTATTAAAAAAAAGTTTTGCAGTTTTAACTAATGTGGCATGTTCCATACTTTTAGGTTGCTGTTGTTCCGGTTGGATTTCCTGCTACACCACTACTTCTTGGCAGAATTAGGATATGCATTTCTGCTTCTCACTCAAGGGAAGATCTTATCAAAGGATTGGAGGTAAAGCACATAATTAACTGAATCTATGGAACTAACTGAATTCATTTTTGGTTTGTGCCGTTCATTCATATCTGAGTATGCATTACTTTCCATGAATATTTTTCAGGTTATCAGCAACGTTGGTGATCTTGTTGGAATCAAGTACTTACCAGTTGAGCAAGAGGAGACTACATCTGTTGAGAAACCAAAGAAGCTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000202