Os08g0493100

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Revision as of 13:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0493100| Description = Cyclin-like F-box domain containing protein| Version = NM_001068658.1 GI:115477053 GeneID:4345914| Length = 4114 bp|...")
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Gene Name

Os08g0493100

Description

Cyclin-like F-box domain containing protein

Version

NM_001068658.1 GI:115477053 GeneID:4345914

Length

4114 bp

Definition

Oryza sativa Japonica Group Os08g0493100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24439732..24443845

Sequence Coding Region

24439903..24440760,24442021..24442396,24443336..24443451

Expression

GEO Profiles:Os08g0493100

Genome Context

<gbrowseImage1> name=NC_008401:24439732..24443845 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24439732..24443845 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggagcaggagaccagtatcggggacctgcacacggatgccttcgtggagatcctgcggcgcgtcgcgccgagcgcgcgccgccgcctccgcctcgtctgccggcgctggcgcaacgtcatcaactcccgcgcgccggtgtggcggggccacgcgaagacgctcgccttcgtctaccatcgccccggtccagccaccgccgcgtacgccatcgacggcctggaggaggacgacgaagggtgctaccggaagctatgggacgccgccgccgacccgagtcttccggccatctactcccgcctgaggatgatcggcagctgcaacggcctgctctgcctgtacgacgagggggtcaccggcgacatcgcgctgctcaacccggtcaccggcgagacgctggacgtcgccgggccgccgggccaccggctcaggcgccaggagccgtacggccacgtcccgtacggcgaggcgttcagcttcacgtaccacgaggcgacggagaggtacaagatcgtgcacctcgccgtcagcgacgggcggctggaggcggtggaggtgctcacgctcgtggacggcgcgccgtcgccgtcgtggcggagggtggcggcgcccgccggatcgagctgctggctgccggccggcgtcgtcagcgacggccaagccacgtactggatcaaccacggcggcggcgacaggctcatgtcgtttgacctcacggatgagcgtgtcgcgacgatcacgtcgctgccggtggcggccaagaacttgaacgccggttgcttgaggaaggcgcgtgggaggctgtgcgtgggcaaccgtatccatcacgactatcaaaacaacaccgaaatcgatgagatgtggttactggagcgtgatggatgtgaaagcttggagaggtggtattgccggttctacttgactacgcgactgtgcatggaggtgcaacaagttgtagggccacactttacccagggcgaacatatcttggcccatcgccatggatccttgtatgtgcatcggtgcgtgagcagtgcgacaaggccacagtgcagtgtagcgcagatacacgagcactggccttaccatgaacccatgttcacgtgtggtcatgcaagtaatattcgggccttctcctacatcgagactacggagccattgaacgtataccaatgcaatggtggatctaagattggaagtgtggttaataacgatgaggagatggctacaggtaagacgacatctctagggcaaatgctaacctccatgttcaatgacctcccaagtcctcaccccaagcgcccggttgccaggcgaagaaaacggcgaaccaatcgttttaagtga</cdnaseq>

Protein Sequence

<aaseq>MEEQETSIGDLHTDAFVEILRRVAPSARRRLRLVCRRWRNVINS RAPVWRGHAKTLAFVYHRPGPATAAYAIDGLEEDDEGCYRKLWDAAADPSLPAIYSRL RMIGSCNGLLCLYDEGVTGDIALLNPVTGETLDVAGPPGHRLRRQEPYGHVPYGEAFS FTYHEATERYKIVHLAVSDGRLEAVEVLTLVDGAPSPSWRRVAAPAGSSCWLPAGVVS DGQATYWINHGGGDRLMSFDLTDERVATITSLPVAAKNLNAGCLRKARGRLCVGNRIH HDYQNNTEIDEMWLLERDGCESLERWYCRFYLTTRLCMEVQQVVGPHFTQGEHILAHR HGSLYVHRCVSSATRPQCSVAQIHEHWPYHEPMFTCGHASNIRAFSYIETTEPLNVYQ CNGGSKIGSVVNNDEEMATGKTTSLGQMLTSMFNDLPSPHPKRPVARRRKRRTNRFK</aaseq>

Gene Sequence

<dnaseqindica>172..1029#2290..2665#3605..3720#cacatccagaacaagggtcgagagtcgttttttcactcttctcaaccccgtttattggggatcctagatccatacgcataggtatcctcctgaccccccagatgatccaggcataattaagtacgtgatttttcccactgcaaatcacccaagggcgaaggcgtcgacgagatggaggagcaggagaccagtatcggggacctgcacacggatgccttcgtggagatcctgcggcgcgtcgcgccgagcgcgcgccgccgcctccgcctcgtctgccggcgctggcgcaacgtcatcaactcccgcgcgccggtgtggcggggccacgcgaagacgctcgccttcgtctaccatcgccccggtccagccaccgccgcgtacgccatcgacggcctggaggaggacgacgaagggtgctaccggaagctatgggacgccgccgccgacccgagtcttccggccatctactcccgcctgaggatgatcggcagctgcaacggcctgctctgcctgtacgacgagggggtcaccggcgacatcgcgctgctcaacccggtcaccggcgagacgctggacgtcgccgggccgccgggccaccggctcaggcgccaggagccgtacggccacgtcccgtacggcgaggcgttcagcttcacgtaccacgaggcgacggagaggtacaagatcgtgcacctcgccgtcagcgacgggcggctggaggcggtggaggtgctcacgctcgtggacggcgcgccgtcgccgtcgtggcggagggtggcggcgcccgccggatcgagctgctggctgccggccggcgtcgtcagcgacggccaagccacgtactggatcaaccacggcggcggcgacaggctcatgtcgtttgacctcacggatgagcgtgtcgcgacgatcacgtcgctgccggtggcggccaagaacttgaacgccggttgcttgaggaaggcgcgtgggaggctgtgcgtgggcaaccgtatccatcacgactatcaaaacaacaccgaaatcgatgtatgtatattactctctctcctatcataaattacttctcttcattttaaaataaggtctggtttagtttccaaatcttttttttccaaaaacatcacatcgaatttttggacacttatattgagcattaaatatagataaaaataaaaactaataattatatagtttgtatagaaatcgcgagatgaatcttttgagcctaagtaatacatgattagtcataattgttgcgagatgaatcttttgagcctaattagtccatgattagccataagtgctacagtaactcacatgtgctaatgacggcttaattaggctcaaaagcttgtctcgcggtttctaggtgtgttatgatattagtttttctattcgtgcctgaaaaccacttccgaaatccgatcaaacatccgatgtgacacccaaaaattttcttttcacgaactaaatagggtctaagatcatttttatcccctcttatttatcccaaaataagtttatttttaaacagttattgtattggtgtttgtggaaggagaagataaatgtattgagagtagagaaaatgagaaataattgcgttgaaaatagagaaagtgtgagacttttgcattgggatatgatcatatgataaataaatatattgtagtctttttattttatattattggtatgcgtgagatggttagaatatgaatttattttgggaccaaaatattgatgcatggacaagattcccttccaacattaataactttgaccaaactatatccttaaatactcataattccccggctcatgtataccaaatcactcatgcatgtactccctccattcaaaaagactgttgttttagaaagttaaaggcatatgaagaaagaggataaaaacctactccctccgtttcatattataagtcgtttgacttttttcctataccatccatgtaatatgaaacggagggagtaacaatagtgcaaagaaaatggagggagtactataccatccattaatgtggaaagaaaacgagaggggaaaaaaggaggagaagggagtaacaatggttggatcattggatggctaaaacaaaaagaaaaatattaagagatttaatgaatcccatagctaaaaatatattttctgttggatatattcaaaggctaaaaaaaacactcttttatggatgaagggagtatatatatatatatataaccaacttttttttctattttaacctatgtttcattacatacgttggagcaggagatgtggttactggagcgtgatggatgtgaaagcttggagaggtggtattgccggttctacttgactacgcgactgtgcatggaggtgcaacaagttgtagggccacactttacccagggcgaacatatcttggcccatcgccatggatccttgtatgtgcatcggtgcgtgagcagtgcgacaaggccacagtgcagtgtagcgcagatacacgagcactggccttaccatgaacccatgttcacgtgtggtcatgcaagtaatattcgggccttctcctacatcgagactacggagccattgaacgtataccaatgcaatggtggatctaagattggaagtgtggttaataacgatgaggagatggctacaggtatgacctatgtctctttggttctataagtttttacgttttagacaacaacataatattcaaacatgtattttactgtgggtttttattataggcaaaatttgctacgggacactcaaaaaatgtgtaattagctgtaggacaccgcaaagatgtgaatttgctggaggacactttaaaagtgtggtaatttgctgcaggacactgaaagcattaaaatataatatccacacaattgatgggaaacaaactatacaaaatgacagttttacccttattatcttaccctaccctctcacccacccaccatgagtggggtaagataataagggcaaaactgtcactttgtgtgtttctctcttatcaattgtgtggatattatatttcatgcttccagtgtactgtagcaaattaccacacttttgaagtgtcatccaacaaattcacatctttgcggtgtcccacaactaattacacattttttaagtgtcacgtagcaaatttttcctttattataatatatatattttttaaaaaaactaaatgtttaactttattgtaatgctttttaagactagtgtgcatgtcctgttctagtgtcttcaagttaaatatttaaaaagtattaatagttaaagttttaattgtttgatcttaactttattttgaaaaaggtcgaagaattatagagtcggaaggattacatattagaaacattaattgacagtggtaggcggattgtcctgtaagaaagttacaagaataagtttatgagacagagtttaggaagaaaagcataaaatgagagttgttaaataaacatgagggatgagatattcacccttctcacctaatttagatgtgctttattttccatctgttatcagttcttcttggtttgtgtgatatagtgatgtggacaattttttgtttatgcaggtaagacgacatctctagggcaaatgctaacctccatgttcaatgacctcccaagtcctcaccccaagcgcccggttgccaggcgaagaaaacggcgaaccaatcgttttaagtgacggattgtctaccggagtactttcggtatgtccgaacaagaagggatactgtgtcaccagaccaagaaaaaattaaatcatcttagatgttacaaaatcaaggagtgaatggaagcatgcaaccaatgagtatttagatgactccttgagttctaatcaaacatttaatttatctctttatttaagtcttgaatgcataaagactacaaataaaaataacttatttggaaaaactaaaatgtgaaataggtgtaacctttggggatggagggagtaccatttaacctgcttaaagaactatagtttgttaattcttttatatgttttttctattttagagagagagcttatataagtatcaattgaaacttttatacaatttcacctactaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0493100, RefSeq:Os08g0493100