Os08g0494200

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Revision as of 13:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0494200| Description = Conserved hypothetical protein| Version = NM_001068662.1 GI:115477061 GeneID:4345918| Length = 12276 bp| Definition...")
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Gene Name

Os08g0494200

Description

Conserved hypothetical protein

Version

NM_001068662.1 GI:115477061 GeneID:4345918

Length

12276 bp

Definition

Oryza sativa Japonica Group Os08g0494200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24482216..24494491

Sequence Coding Region

24484912..24485037,24494070..24494159

Expression

GEO Profiles:Os08g0494200

Genome Context

<gbrowseImage1> name=NC_008401:24482216..24494491 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24482216..24494491 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccatccgagaagcgtgccgctgtggccggctgcttcctggttggcattgagggagtcatgcagggtttgctcatttccatctacgacgacgatgtttatagcaagcacggcttcctagctcaggaactattcacacttccaccgggcgtgactatcatgcaagcaagactgagaaaagcactggaatggaagactaaaaggacagcgctttag</cdnaseq>

Protein Sequence

<aaseq>MPSEKRAAVAGCFLVGIEGVMQGLLISIYDDDVYSKHGFLAQEL FTLPPGVTIMQARLRKALEWKTKRTAL</aaseq>

Gene Sequence

<dnaseqindica>2697..2822#11855..11944#gagaggcttgaaattgaagcagtagctgccgcctgccgagaggtaaacatgctatagctctaaatcacttttttttctcatttttttataccctacgagccagtgatggttctataaagaaatagcaatgttatttaagcaaattagatagagttacagtctccttctcatctacatatggttaaaaaaaattagtggacaaactagatagagttacagtctttctttcatctacatatggttaaaaaaatagtggggtattcatagtaaaaaaattagtggggtcttcatgggggctcttaaagccttcacgccagtagtgaggcctcagagaccccgccgcctccatgctggatccgctctactaggagcgtatctttgtatcgtagtgaggcctcgagaccctgccgcctctatgctggatccgctctgctaggagcgtatctttgtatcaagaggaatagaagttattagattagaaggggtcagggtaccagaaaaaaacattagactagagctacaatctcacaactaattgggacgatctaggaactcctaaaactaaaactaggggccaagcaccggcactcccgtccttgccaggtgccatagctccacctccgcagacatggatttcgctatatccgcccaggatcgccttcttctcatttctagatgttgattttacgtctggatagaatctgtacgcagtaacaattcctggatatttccaactgattgcagtgataatttgtggatatttggtttgtttagtgaagcaatgtcacgtgatctttgttgattgcaaaggtttgaatggcatatttaatatattgatcgatcagatgggggagctctttttttttcttttttcatatatacttctttttccacggttttatagaaatacacgagtatacctcgttcgtttcctatgaaaaggatggattaagttttgaattttcgtgccatgcttttcaaaccgctaaacagtgcgttttgtgcgaaaactttgtatatgaaagttgttctaaaatattagattaatccattttccaagtttgtaataattaaaactcaattaatcacccgttattactatctcgttttacgtgaaacacttaatcttcatcggaagattcaaacaccatatttcgtattttatttttacaaaattatacatgtcgccaatgtcagatggcgacatggatatattttttaaaattttgttaaaaaaacaacatacaaaatcataggaaaagtatatatttggcgaaaaaaaatctcagatggggagtttattaacgtactattccggactgaacacaagttataaactccagccatacatatatcccaaatccagggaaatccatctctctcaatttttggtttaacatttcggcatttcaccatatagattcaatttcggtagcctctttgtttactgaaacagtacgtgaaatccattttcttttgcacgataacaattacttctttttttctctttcaagaactactgatcactccgttaatttttaaaaatcacatttttattttaataaagtttaacccaaaaggttcaataatagttagccaaactataactacacttaaaaaagatttagggacattttaaacattttttaaaatcgttttagggacattttaaacattttttttaaaaacgatttatgagcgtgttggggattgaatacgagaactcaggttagaaccacacaccccttgtcactactctatcaagtgtatatcaaacattttgttgaaccctttgttacgactgatagaaaaaatctatgataaaaaaaatctactaattagcagtaagatttaccaactggtccgatcttgcatttggcagcagcagcagcaacagctagcaagcatgcatatatggtcctaacatcggcagggcactgagctgtaatcggatcgtccgctacctagatacacaggtcacaacactgaacacccccaacacaaacgatgctaattgctacccatccacagtgtacgtgcccctgctgcggctatagctttagctaacgccggcttgtgaccttgtgatctagctcgtctacgacgaacactgccgctgctgctgctgctgttggagttagacatcacgtaggagtggagccggcccggcaggggtcgggttaattagcagctgagagagctatgtagcaaattcagaaatccagcagacagaaatctgcatctccgtctgctcaactcgtcgcggtcgcagagacggccaaggttgccaacctttacatccctgaccgctactgccaaccacgggcctaccactgctactctgcctgctgcgcaaaacgcaatgcatatacatgctaagatgagctataacttagctataactcggcactttcagttgcagcttggcatgcagagccttcagctctcttcagaagtgtgagctctgaatctctgatgatggcgttggaacaacaagaaggttttcaggtgtatgtctctgtctcgatctcctcagtcgatttatgttcaattagttcttgagtttgattgttggttaatctccattctcgagttgattgattaatttcactgtatttatgcttagtatatacatgatcgatgggcagtgcgactgatgaggtaggagatgggattaacgctgcctggctccctgaatgccatccgagaagcgtgccgctgtggccggctgcttcctggttggcattgagggagtcatgcagggtttgctcatttccatctacgacgacgatgtttatagcaagcacggcttcctagctcaggtatggtgcacttattcaagacgctttgcttcgtaagaagaacatatgaaatttaaagaatttttagccctatagaaaaaattcttgggaaggcctttgaaataaaggattgaatcctatcactttctttaaaactcctatgaaaaacgaacaattctatagagatttttgaagaaaagttagcaagagctgcttgagaacttctatttgagtttatctttctcatatgatttttgtatttttctcatccgattcatgtattttgcgatcctctattttgcactttcattccctatcaaaagaattctgtatttttttattcatatgtttctatgtttcaaaggcaccatcaatgtttttatagcttttttgcacttacatttctgatcctgcgttttaaaggagccatcaatgttgtttcttcttctaccttacagaatcagatctggcactttctgcatcagcttagcatgtcattgttcatgcactcaaaatccatcgtagcgttcatgcaaacataaatcgaacagatggcagaagatagaattcaggaagtcttattatgagttttgaatgattcattgagggcgtttcatatatccatggttttcgagacttaagcggttaaaagagaactaatgataaatttgaagtcaacacagaaaaaatgccattttacttcacatgttagattcttcaaagagagtagatgacctcctcatgtagttaaccactgcctaaccatcggcggcagtaaagctatgtcacattgaaggcgacatgtcgctcaaacttagcatagatgagagatgacgtacccttgaacattcatttgacaaacgataagattgaaaacaaggatactaactaaagaatagaactatttgataggaacactaatgctatccaaaatgataggaacattcatttcacaaatgctatccaaaatgaccagtactagtttgaataccatgagtattctataacactgataaactgtatttacagctagtgctccctcttgcaaaatcttaaatcataaggaacaaaaagtgtaagtgtatgctaaaaagtgccaattgcgtatagattctcaacttcagtagagcctaattcttgtggagatttccctctggcaaatggggcaaaccttcagatccttcccgcagtccgagcacgtctgcattccaaggtctcatcagtttagtatttacatctgaatctttatatacattttcaagtaattttcatacctgatgcccacatccaaaagcaaggttctttgcttccaaccagcagattggacaagtctgcaaaacacaagttcagcatggcatcaaattaacaaacatgacaaagttgacggcttgacgcatatatgaaagcatatactatctgcaaaacacaagttcaacataggatctgttttcaagaaagtacctgatcacctatgtcactatcctgtttaggtgctgatgtctttttctgcagcgacccatagctagtagattgcgtttctttgactgttgagcacccatagtattgttggaaatccctcacaggtggaggtaacactgttcgatgtggaaatcctcgacgttttctgcacccaaaaaaaggacaaggtcattgctgaaaaataccaggattctgggttttctgaagtgttatgattttgatttagacagtaaaatacccaagaagttggaggtttattgctgccttgaactgttctgggatctccatcaatgctgaaagagcaaattctgcctcctttttgctggcaggaacaggtcttgacatgatctctgtgaagttcacaaactgcatcgcactgtcatattagtatttcccatgattatgctaaatatgggctgtcacttaacccattaacaacagagcatacctggaagttgtcgaacgcacgagaagggatgttgtcatcgaattgcctcatcatatcccatggcccatcgccaactccaacaagcacaattgacaaagggtagtcactgaaaaaaaaagtcatgtttgagttgaatgtaagagctcaacatggcaatatattagttactaacatgatagtaacactaaacacggaaatgctaagcatatgattacctggctttcacaatggcatctatagtctccctttcctgagggctcagctgcccattacctgtgtcaacactgcgtgtaacctatgcaaattttcaacgaaaacatatcaagaacggtgcagttgtaaattcattagacggttagaccagatatcatatgtcaaattattcatgctggcagacttaggtactcatttcagaacaaacctgtccatctgcaattataagtaggacatgatactggccaccactactatccacaattccaatagctgtctcaatcatcggtgcaaatgaagtggggcctgttgagaacaatcgaaacatatcagttgaatgaatatcgatgtcttctaattgaaactcaagcagaagatgaaccaaccagccaaacgtagttgtggaacaatttctctgtaccgatcaagtgcttgttcaaaaccatcacatggtttgttgtcaggatagaagctaaataccttctggtcatgtgtagtagctgtagcataaacttagtattaaaaatttgcataacttctatgtacaaaatgaagcatgtcgagagatttaatgaactgaccatcaccaaatccatagcatggtatcaggttgtcctcatcaaatcgtgaaagagtttgccctatgatagatatggcttgctcatatgggtttgagatatggcccagagaatgcaggctctggttgttgaaggaaactctgcctgcatataattagaaaccatcagctcttttctaagaagaaacaataagcctgaagatgagttgatcaaagttcaggaagcagtgcaccgataaacttgaacaaacctgtccattcattggacttggtgaaatcaatcccaacaatcagatttgatgactcaagaccagcgtgtgcaagagcatcagttacctagattaaggaaaacaacatgatatcatacttcagtataacaaaagaaatatgtcttatgtcacatgtgctgaaggggaacagaagagcctatgaaaaaaaaaatctagttgtcctgaaaaaaaatgtttttttttcttttgggaagttgcccctgtgacaacatcctttcacttcgacagcttcttgtcgaagttggaactttgtaaacatgtgcatactcctttcttaagtaaatttagtccgcctagggatacaggagatttcactgtatctaattctttctttagaccaagcataattattaattcttatggtagtgataattttacttttacttgaagaaccagggcaaactgcaaaactgtatacatctaagaggcacctactttgcaggacatgaacaatctattctcacgacatatgaacagcatgagtataagatgataccaaggaggaacttgatatcaaactgatagacaggaaatagtagtttagtacacccaaacctcccaccaacatatatgtgtgaaagaacttattcctgaacaggaacaaatccatttccattcaagtacagcaccatcattgactagatcacatgataaacaccacacaactattcagaagtaaacagcaatgcccacacatagcactgtgtacccggcagcaaatgagcagtttcgcaagcaagaacagatgcatgcatcaggagggaccgaattaatctcacctgctctagggtatggtaatcatcgccgaacttggcgaaccgattgttccccttcggcgcggcattgctgctgctgctgtggttgcagcagtgcggctgctgccccgacggattctgcttggagcagaacgcccccatgtcctcctcctcttaatcaatctcttccctcccctctctccactcgctgcagaacaaatcaacaagaaaaaatcagcaatctctcgattccgctcaagaagaaagagagatagggtttaacagagtcgcccaccacaatctggaaagaaaaaaagccctcgcaagaactgaagatgagaatttggggggaggagagcaaccgattgccgaaaaataagagcgtatagagataataaacataataaaaaccacgacgaatcaaaagaactcccggatttgttaggcgaacctacattgcgcggaaatccttcgcggggaagcacgcaaatccgttggcgtggcgtggtgaggacgaaatcaagaacccggaatcgagcgaactgaaaactgaacagattttttgaggagataaataaatatagtaagagtttgctccgtttcgatccttctcaaccgtcagattgggctcgatttgggctgcgggaaattgcgtggatgggcccactagtttcgtgcagaaaaaaaaatataagggagaaaaaagaggagatgaactcgagatctttgtgtgtgctagcctcattctttacggcacggcgtagtccaagggtggaacgccgtttttgtgctggttttcagatctggatatgtttgtttttacccaaatttgtatttgtatactgatccactgtgccaacgacagttgcaaggcagtttctcagaaagaaaggtgaatctcttttgagagcattgccgtttttcggacagtgcgtgcttgctgataatggtaatttggtagtgatccatggagggcactttcttcgaaagactagccggtactctatccgttttaagataaattaacttaaaattaaatgaggtattttctactacaacgatatatctatctcgtccaatcctattagtttatttttaaacgaagggagtagctgagacgatctacctcctcaaaagcaattctcctcaaaagcaatttgttttagttaggtggacagatctcaagaaggttcttccgaaagttcatacttactgagatttcaaattttcacgtcagatttgacccttcaccttcaaattttgctggcaacttttctttagaattgaggcgaaccattgggccggaacgtgattgccggcccataccacttgggccgaaacgtggactgccacctccggtgaggcccatactacttggtatggcggacgaacggccgctgatcgccggagccatgcagctgcggcggcgggggcgccagatcgcggcgctgctcaagtcggcgtcgcgcgccggcgacctcctccagctccacgccgccatgatcaagtcctccctcttcccgcaccacgccttcccctctgccaagctgctcgcctcgccgcacgcgccgctcccctacgcgctctccctcttcgccgccatccccaccccgacgctcttccaccacaccgcgctcctccgcgcgctctccgcctccgccggcggctcgctggccgccgcgctgtccgtcctcgcctccgcgcgggcgcgcctccccgctctggacgagttcgcgttccagccgctgctcgcgctctgcgccaagcggggccccgacggcgacgccgccgcggcctcgctcgggaggcaggtgcacgcgctcgtcgtgcggtacgggttctcgggcgtcgttagccttgggaacgccctgtgccacttctactgctgctgtggcggtggtggcggcgagggaatggcggacgcgcggagggtgttcgatgaaatgccggaacgggacgccgtgtcgtggaacacggttattggagggtatgtcagggcgggggaggtaaccaaagcggtggatatgttcagtgagatgatgtgctgcagtgtgggcgtcagtgtgacggcgttggtcaccatgatccggtgtgggtggcaagctgagcctgtgcatggattctgcatcaaggtggggttctgcagggatgcaaaggtggcatctgcaatggttgggatgtatgtgagagagaagagcgtcgagtgtggcaggaaggtgttcgatgaggcgaccaagagggacctggtgctgtacaattgtatggtggatggctatgctgaggcagggcaagttgaggaggcaatgggcttggtggataggatgaggctggagggagtgaggccaagctcagggactcttgtgggtgtgctgtctgcttgtggagcatctggggcaatggcagccggccgtcgccttcacgagattgcgctagaagcaggacttgagcttgacactgcacttggcacagctctcatggatatgtatttcaagtgcgggtaccccagtgaggcggtggcggttttcgacgcgatgcaagaaagggatgtgaaggcatggacagtgatgatcatgggtttcggtgttaatggacaggcaggtgaagtgatctccctgtttcgctccatggaagaagatggagtggtgcctaacgaggtcacctttcttgcggtactgaatgcctgtagccatggtgggttggtgtcggaagggaagaagttcatggagagcatggtgttgcaatatggcatcttccctaacactgaacactatggctgcatcatcgatctcctgggaagggcggggcggttggatgaagcttatgagctcatagcgagcctatcttcccagagtgatgccacagcatggagagccttgcttgcggcctgcagagtccatggcaatgccaacctggggaggatggtgcaggcacggttggataacatggacgactaccatccatcagatgccattcttttgtcaaatacatatgcattggaaagccgatgggatgagattgcacatgtcagagattcagaagatcagaaaattgtcaaggacaagaaggaaccaggttgcagctccatagaagtgtcttggtgaggtatctatctgaatctcggcgtgattctcaattggaagccataccttccgtataagtgactaacactggattatgccaagatcaacccttgcttgaaaagaaaatcatactaaccatgagcacagttgcaaatattgtattgcacatttgctaaacttcagaaggcaagaattaaaagttgaaagtaaggaattctcaaatcgtggtgtggatctcttgttatgtacctaagatctgcctgtacagtcttcctcgctagtgccagtagtaccactgctacactgctgatcttgtcttcctggaaggactggaaacaggtttactgtcaaagtggccgttggtgttgggtactttgcctggggccgtgtcacatgatcagaaattccatgttcttgcgatggttcactgtcttcacttgttgtagactctgggaagagctgtagctcacttggtgtggtgccatagtgctgctcaatgacaactggctgctgctgaggaaatgctgctgttatgtcagttgtgatgaccgatattctgataaatgtggcacgcgatgtactgggaacaatcccgcttgtgcgatagggtctcctagagctggtctagtatttacgtgactcgaaacaggactgccttccatctgcgtcgtaactcctaagcttgttttgaagctccaagatttcactatgaagcatactgttatcgtcgtgcagttcatttctttccaatgcaacctgtttcgtagcatggaaggtatgattatgaatcagcggtaaggtggcattattttctgaataatgatagtggcatgaatctgaggctgacatattcttgcatgaagctatcaccatagtggcatgaatttaacaaccactggaattggacccctctaaacgaactcttaaagtgaaaatatgtacttacatttttgtgtccatattactagcagcagactatcaaattaataaggaagtaaataatttaactactaattcgcaatgagctgaataggatatttcgattcgaaagatcttacagcctttcataatgagattaattcttcaaggcactattctcctttcagagagattccactagtgaaagtaataaatcttttagtatttgtgtagtttcacccagtacacatgccttctcattgttctgcctgtctggttctggaaaagagcttgcacattgcttaagaaaatataatttcatattcaagaaaatatagttttggaacttagaaaactaaaacctatcatagacaaatggtatgcatgaggatacttgcactcagtgacagtatgacacatttttgtttttggtattacaggtcagtggtatatgtcaggttatggcagatgataatgtaaatactaaactaagtccatgccggctgttacatttctagtatttctgacatcaacctaggatccggttgtccgagcttctaccatcaatcataaaatgtagttagagataaccaactacaagcttacaaatggctgtctctagcagtatggaaagtatgtgctggatggacgacataaaataagcactttcataaagacaaatccaaatgctgtaatgcaattatgcaatctgaaatcatgtttatggatttgcacctatgaagcaaacacatagcaagtttcccagctcagtacagaggtcattctgcttgtccagcttaagtttatccctgtctgatttatggtttctctttggaaccttcttatcacgcttcttgttcactatacccgcatataaagttcaaacatcagttgtagaatcaagtattgtgattttaaagcagtttggacgatattctttcatggaatagctcaagatgaagtaaggaattgcttttcaatttgaacttgtggtagttaaccccattgcaggaattaaatttgcaatgctcaaagaatgcaaaaggtctgagcacaaccacaataatatccatttaattaaaggatgacccaagagattaacttcctaaaatacaagatgaaaattctgtatggtagaaatgcaaagtaagattaggcctatgtacgaggtaatgccataatttgggcggtttggtaccctttgtacacatgatgttggttaattgattttgtgtattcattctgtttagggccttgatgagtaatgatgacccaggtgttcgtgttatgcaggaactattcacacttccaccgggcgtgactatcatgcaagcaagactgagaaaagcactggaatggaagactaaaaggacagcgctttagtgaattcgttgcagccccttacgctctcttgtgagttgtgactgaatctatgtttagccagaaacaaaatttgagcatatgttaattttcttcgaagatacctttcatgagagggtgaaagatgggaaggagtagaatgcagtttttgtgccgatctttgtatttgctttagggtatctgatgatacaattgttatgaaggaactatattcccaccatccggatttaactaatttattgtataaggtcatgatcaattgtttagatggttgctatctatttatacgaatgatcaggcagtgtgtcctttatatattttttttggttttgtct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0494200, RefSeq:Os08g0494200