Os08g0496000

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Revision as of 13:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0496000| Description = Cytochrome oxidase assembly family protein| Version = NM_001068669.1 GI:115477075 GeneID:4345926| Length = 3662 bp| ...")
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Gene Name

Os08g0496000

Description

Cytochrome oxidase assembly family protein

Version

NM_001068669.1 GI:115477075 GeneID:4345926

Length

3662 bp

Definition

Oryza sativa Japonica Group Os08g0496000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24570387..24574048

Sequence Coding Region

24570479..24570724,24571162..24571478,24572238..24572463,24572549..24572794,24572882..24572992
,24573298..24573429,24573544..24573714

Expression

GEO Profiles:Os08g0496000

Genome Context

<gbrowseImage1> name=NC_008401:24570387..24574048 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24570387..24574048 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggggagcagggtggcggcggcgctgctccgccgggggagggaccaggcgtcctcgctcatggccgctcgcctcccgaggggagcccccgctccgtctccggctgctcctagggttggatccggctccgtctgcggctgcggcggcggcggcggtttactaactggatcgaggtcgacgggatccgtcttctccgcatcgcgcctcgcctcgttccacgccttccgttcaatcggctccaagaccttgatgggccaatgcacaaggaaaatgactactactgtggcagcaatgaattcaggcgtggccaatgcagcggcatattcaggattgaagttgcttgttaccaaagggccccaagcacagaaggccatcgggatatggctcttcggatgtgccacgtgggtattcggcttggtcatacttggaggagttacacggcttacacgctcaggattgtcgatgactgactggaaatttacggggagcttgcctccaatgtcagatgaagagtggctgctggaatttgagaaatacaaactgtcacctgagtacaagagggtgaacaaaggcatgagccttggagatttcaaatttatatactggatggagtatggacacagaatgtggggaagggctctgggatttctattttctgttccttttgcctatttcattgcaaaagggtatgttacccgccaacttggactcaggctgtcaggtcttttcgcacttggtgcgggtcaaggactaattggctggtggatggtgaaaagtggtcttgaggaaccagcatctgagtatgttcaaccaagagtcagcccatacagactggcgacccatttaacgtctgcatttgttatatattgtggcatattgtggacagctctgtcagtggttatgccagaacctccggctggatcaatgaattgggtaaattctgcagcaaagattaaaaagttagcaattcctgtcagtgccgtggtaggcattactgccatatctggagcatttgttgcgggcaatgatgcagggcatgcatacaatacatttcccaagatgggtgacacctggataccagaagatgtgttcgctatggagcctttcatacgtaacttctttgagaacacgtccactgtgcagcttaatcaccgaattcttgcaacaactaccctattgtctgtgggtggcttatggttggctgcaaggaaagtggacatgcatccagcaatcaagtctcttatcggaagcacgcttggaatggctgcccttcaggttacattgggaatatctacacttttgatgtatgttcctacttccttgggctcagctcatcaagctggggcattgacactactgtcactgatgatccttctcacccacactttaagaagaccgtcaccagcccttctgaagtcacttgcatcagcagtgaaatcaacctga</cdnaseq>

Protein Sequence

<aaseq>MMGSRVAAALLRRGRDQASSLMAARLPRGAPAPSPAAPRVGSGS VCGCGGGGGLLTGSRSTGSVFSASRLASFHAFRSIGSKTLMGQCTRKMTTTVAAMNSG VANAAAYSGLKLLVTKGPQAQKAIGIWLFGCATWVFGLVILGGVTRLTRSGLSMTDWK FTGSLPPMSDEEWLLEFEKYKLSPEYKRVNKGMSLGDFKFIYWMEYGHRMWGRALGFL FSVPFAYFIAKGYVTRQLGLRLSGLFALGAGQGLIGWWMVKSGLEEPASEYVQPRVSP YRLATHLTSAFVIYCGILWTALSVVMPEPPAGSMNWVNSAAKIKKLAIPVSAVVGITA ISGAFVAGNDAGHAYNTFPKMGDTWIPEDVFAMEPFIRNFFENTSTVQLNHRILATTT LLSVGGLWLAARKVDMHPAIKSLIGSTLGMAALQVTLGISTLLMYVPTSLGSAHQAGA LTLLSLMILLTHTLRRPSPALLKSLASAVKST</aaseq>

Gene Sequence

<dnaseqindica>93..338#776..1092#1852..2077#2163..2408#2496..2606#2912..3043#3158..3328#acaattttgttcccccaaaaattctaaacctccgcgtcgccttcttcttcttcttcctccgcaagcttgctagcctcctcctcctccgcgccatgatggggagcagggtggcggcggcgctgctccgccgggggagggaccaggcgtcctcgctcatggccgctcgcctcccgaggggagcccccgctccgtctccggctgctcctagggttggatccggctccgtctgcggctgcggcggcggcggcggtttactaactggatcgaggtcgacgggatccgtcttctccgcatcgcgcctcgcctcgttccacgccttccgttcaatcggctccaaggtgcgttcgttgttgtgcttttccccccattctgcatcccttggttggtcgtgaactcgtgatgataccctcactctggagggtagtggattgtggatttgtggtcaaccatctgtgagtgtgacacaatgacgcgatcgttttttgagcggaatggagcggagaacatgctgttaggaggagtactatgaatttgtagcgacattagtttcgatttggatgtgtggaattttggtgtcagggtctgagcatttttggatcggggagtcaacatacatgatgaactgggtgtattaaatcttggccgtgctatataatcaatttggaatatgatatgcaccacattcatgggtcctatataatcaatttccttaacttgtaaccactaaaaagtgctagtactcgtgctgatagaggttttatgtgctctatttcagaccttgatgggccaatgcacaaggaaaatgactactactgtggcagcaatgaattcaggcgtggccaatgcagcggcatattcaggattgaagttgcttgttaccaaagggccccaagcacagaaggccatcgggatatggctcttcggatgtgccacgtgggtattcggcttggtcatacttggaggagttacacggcttacacgctcaggattgtcgatgactgactggaaatttacggggagcttgcctccaatgtcagatgaagagtggctgctggaatttgagaaatacaaactgtcacctgagtacaagaggtaagaatttgttggcctactgcagtgtgctactgccaaaaaacccactggtgaaactaggagttgtacagttccacctaataattgtgtagcatgtcgaattttgtgtatcccctgttatgatccatttagtgtaaacatcaatctcataattttattgctgctgaacttgtactgcagttagcttcagttcttgatattatcatgctgattgatgaattttagaatgaatatttaggatgctatagaagaactatccataaatgtttcaattgattagaaataggtcaaatgtttgccttttctatatatgcttatgagcttatctaggactttctttttctaaacttcaactggttatctcatcatgggccaatagaacatgccaggctgcctggagaacatcttgaactctatggtcttaacattaacacttttaacagcttgtaagcaagtgttaaataggtttcactgggctggtactgagtctgggaccctcgatccaattacttttagaggaactcatgaattttctgttatgtgtaaacaatttgaaaatggtacggttctaatagttatatatgagaaaaataactgaaatattcagcatttggtgacttttgcgctaattagtgtgacttgttaagatgtctcagtcacgtcaaattttgttttcaaacatgtacatattacaatgagatactgttttggatattatttttcccctaatgcaatagcagcattcatgaacatttctagggtgaacaaaggcatgagccttggagatttcaaatttatatactggatggagtatggacacagaatgtggggaagggctctgggatttctattttctgttccttttgcctatttcattgcaaaagggtatgttacccgccaacttggactcaggctgtcaggtcttttcgcacttggtgcgggtcaaggactaattggctggtggatggtgaaaagtggtcttgaggtgcttatattgtctaatgcaacatccttcttattgagctactagtgtttgttgcatgtggattcatcattctttttcattgtaggaaccagcatctgagtatgttcaaccaagagtcagcccatacagactggcgacccatttaacgtctgcatttgttatatattgtggcatattgtggacagctctgtcagtggttatgccagaacctccggctggatcaatgaattgggtaaattctgcagcaaagattaaaaagttagcaattcctgtcagtgccgtggtaggcattactgccatatctggagcatttgttgcgggcaatgatgcagtatgtcaatgttctcactcttatcttaaaaaaacatgtgtgcatctaagtatttgtcctaactgtctaattatttactaccaacaggggcatgcatacaatacatttcccaagatgggtgacacctggataccagaagatgtgttcgctatggagcctttcatacgtaacttctttgagaacacgtccactgtgcaggtaatgctttatctcacaataaagagtcgacaactctgaaattttgtgatgtttaggagattatgcttgtagtgcctttttggattaattttcttctttttttacctgtaatataagctactcactccactattctaggaaaaggaacaactggctataccaataaagaaaacatgttctttttcatagcatgcaatcatcaacattgcaggacagtcctatgaatgccgagcacagaccattcttctatataattctggtgtagcacaatgtcctgtgctaatatggagttttcactgttgtagcttaatcaccgaattcttgcaacaactaccctattgtctgtgggtggcttatggttggctgcaaggaaagtggacatgcatccagcaatcaagtctcttatcggaagcacgcttggaatggctgcccttcaggtaaaaaattataaaaacctacccggatttgttgttcagatatcaatcatcaccgtagttttttgcttaattaaaatggcctaaaatgttatcattctactttctttcaaccaggttacattgggaatatctacacttttgatgtatgttcctacttccttgggctcagctcatcaagctggggcattgacactactgtcactgatgatccttctcacccacactttaagaagaccgtcaccagcccttctgaagtcacttgcatcagcagtgaaatcaacctgacaccgtgtcatgaaattttccttcaggcacagtagactgtttgatatttttcccgtcttcttatagctgacatgcggtcgcctcctttgcactacattatcaccgtactcatttggcccaaaagcattcaattcttgaataaggggccctcataattttctagtgccaaatattacgtaccttttccaagacttctttggacatgctgcattttgtcaggcaatattgcatttttgacatgctgtccgcagctgtgcactctgattagataatatctagggaaactattgtatcatgtaccaaattaataccaagtctccaaacatttctattg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0496000, RefSeq:Os08g0496000