Os08g0496200

From RiceWiki
Revision as of 13:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0496200| Description = Glycosyl transferase, family 8 protein| Version = NM_001188711.1 GI:297726552 GeneID:9266160| Length = 3889 bp| Def...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0496200

Description

Glycosyl transferase, family 8 protein

Version

NM_001188711.1 GI:297726552 GeneID:9266160

Length

3889 bp

Definition

Oryza sativa Japonica Group Os08g0496200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24583193..24587081

Sequence Coding Region

24586555..24586896

Expression

GEO Profiles:Os08g0496200

Genome Context

<gbrowseImage1> name=NC_008401:24583193..24587081 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24583193..24587081 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcctcatttctgtggtgttgactatatatttgaccaagggcatatgctcctcgtttctgcagaatgaacatagactactgtggaagttaggaacactccctgctggtcttgtgacattctggaaccaaacattccctcttgatcacaaatggcatctactggggctaggatacaagccaaatgtgaatcaaaaggatatcgagggagcagctgtgatacactacaacgggaatcggaaaccttggctcgagattgcaatggccaaataccgcaaatactggtccaaatatgtcaattttgacaatgtgtttatacgtcagtgcaacatacatccctga</cdnaseq>

Protein Sequence

<aaseq>MLLISVVLTIYLTKGICSSFLQNEHRLLWKLGTLPAGLVTFWNQ TFPLDHKWHLLGLGYKPNVNQKDIEGAAVIHYNGNRKPWLEIAMAKYRKYWSKYVNFD NVFIRQCNIHP</aaseq>

Gene Sequence

<dnaseqindica>3363..3704#gctttgaatagaacgccgcgacggcctcctcccctctccatcgatcgagcgagacgctccggcgcgcggccacctccggtgcggcggcttgccggaggcgatcgacgggcggcgggtggtccgaccgatggcgaccatggcgtcggcggcggcggcatccgcgtccgcgcggcggtggcggtggaggtggaagtggaggacgcgggacgcggtgctggcgctgctcatcgcctcggtgctcgcgccgcccctcctgctctacggcggcgcccccatcgcccccttctccggccccatccgtacgcttcctcgatctgctgcttcgcccttcgcctaaaaaacaaaaaaaaaatggtgacgaaaatttcctccgttctgacgcgcgtgtgatgtgatctctcggtgttcgcagtgatggggagcgccgcctccggcctcgatctgtccaatctggtacggccgcgttaattggaatccccccaccagttctcatcagccgattaggggtaaactcgccatcgttttgacgtgttttattgtccctagattgctcggaaggaggtgcgggagcggctaaatgctcttaaacaggttgatttctgcatacagatgtcaaaatgaatcggtaaatttgttgtgttctgaatgttgcattgctgaaatatttgtttctaggacgcatttgctgcggtgaaggagcctattcagacggttgcatctgacgctgccgcactcaaggccggtttgattcaacacattgttgatcagagcagtggtatagatagagggaccaaggataatggtatggttgcttctgtgaataagaagggcggtgttgaattcacaaaagagaatggcctaatcgatgatggtaaattgcgggagaacaaagttcgtgcaatgcgcaattctagtggtttgaatattacactgaacaaggtaaagtacgtattgtttgctcctcagtgaatattaatatggttgattgcctgtattcctgcttaaagagtgaaattagcagtcatatttgtatggttgatgggtataggatcgaatcaagtaaatatcacaacatctaactaattcatgctagtataaatacattcagtttgcagaggcagctatgctgtttccactgaggaatatgcatttcatcaaactatccctccgttaacagatcttatgtttggtacatttcctcctgccctcctggtaatcgatttgttggtgtctctcttttccctttaacagatttgatgctttccttttgccttttgccccattgtagaaatattcaatgaagaaaacctaaaattcttattatcagttgatattctgaagtgtctgattttataatgtaatcctctggctgttgttttgcagtcgacaacaatagtttccctgtcatttaataatttcaggcctaattaattatttaactacttttggtctggtttccaggatcatactgctgacaggccacctgagaaaactacagacactacctcagaggactctgatataagggcaatcagcaataatactagtcattccacagcttctccagatagtacaatccgtgttcttagggaccagttaaaaagagctagaacatatattgggtttctatcttctagaggcaatcatgggtttattaaggatctcagaagaaggatgagggatatccagcaggcactcagtggtgcaaccaatgacaagcaattaccaaagaagtactatctctctcatcgttatacaaagttcttcacagttggcatttccgatgatgatttgtgtctggtgtcagggtactcttttataggaagtcaacatctcttacctgtttaactcaattttgttgcctacacagtgttcatggaagaatcagagaaatggagttgacattaacaaagatcaaacaagtgcatgagaactgtgcagctattatcagtaagctacaagccacacttcactctacagaggagcagatgcaggctcacaagcaagaggctaactatgtcacacaaatagcggctaaagctctacccaaaagacttaactgtcttgcaatgcggcttacaaatgaatattattcttccagctctagcaacaagcattttccatacgaagaaaagttggaagacccaaaactacagcactatgcattattctcggataatgtactaggagctgctgtggttgtaaattcaactattatacatgctaaggtacagcagcctgcaagtgtcagggagtacatataacaaattggatcggcaattcaacttatatttcagtaatattctattaaaaaaacagatttcagtttaaaatatagtaagggctaacatcttgcctcaaattctaatgcagacaccagagaaccatgttttccatattgtgacggataagcttaattatgctgcaatgagaatgtggttcttggaaaattctcaaggtaaagctgctattgaagttcagaacatcgaagactttacatggctaaattcgagctacagtccagttcttaagcagctggaatcccaattcatgatcaactactatttcaagacccagcaggacaagcgtgataacaaccccaagttccagaacccaaaatacttgtccattctcaatcatctacggttctatcttcctgagatcttcccaaagcttaacaaggttttatttcttgatgatgatattgtagtccagcaggacctaagtgcactttggtcaatagacctcaaaggtaaggtcaatggtgctatccaaacctgtggagagactttccataggtttgataggtatctcaacttctcaaaccctcttattgccaagaattttgaacggcgtgcatgcggctgggcatatggcatgaacatgtttgatttgtctgagtggagaaagcgtaatattactgatgtttaccactactggcaggaacaagtgagtattaatgagcttttctacaaatctcttaaggcaaaattgcagcttttcatctcactaagttttaaaaatttactgctaaactcctacttttcaagccgttggttgttaagattgtagcttgtagtacaatatactccctcaattttttaatgtatgacgtcgttagcttttcaaaatacgtttgaccattcgccttatgtaaaaaaaatatgtaattattatttatcttattgtgatttgatttatcgttaaatgttctttaagcatgacttaaaaattttttatatttacatattttttttgaataagacgaatgattaaacatttgtcaaaaagttatcgacgtcatatattaaaaaaaacatatattaaaaaaacggaggtagtatatatttgaccaagggcatatgctcctcatttctgtggtgttgactatatatttgaccaagggcatatgctcctcgtttctgcagaatgaacatagactactgtggaagttaggaacactccctgctggtcttgtgacattctggaaccaaacattccctcttgatcacaaatggcatctactggggctaggatacaagccaaatgtgaatcaaaaggatatcgagggagcagctgtgatacactacaacgggaatcggaaaccttggctcgagattgcaatggccaaataccgcaaatactggtccaaatatgtcaattttgacaatgtgtttatacgtcagtgcaacatacatccctgagttgctgacggatacacctgtgaatatgctgccgaaataatcttttttttaggccttttaggtttgtttcttccctggtatctaaatgatctagggggtttatatttattgattaatttctttcttgtaaccataatgcaaacaagttataaggtcaattgcaaattcaccaccattttgaatcg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0496200, RefSeq:Os08g0496200