BGIOSGA000393

From RiceWiki
Revision as of 18:03, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA000393

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000393, complete gene.

LocusTag

P0018C10.19

Ensembl Transcript ID

BGIOSGA000393-TA

Ensembl Protein ID

BGIOSGA000393-PA

Length

3109

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41744503..41747611

Sequence Coding Region

41747210..41747611,41744503..41745069

Genome Context

<gbrowseImage1> name=IndicaChromosome01:41744503..41747611 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:41744503..41747611 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTCAGAGGCAAAGCAAGCAGCCCAGCCCGGCGACCGCGGTGCACGCGCGCGCGACGACCACGCCGACGCCGACGCCGGGGGAAGACGAGCAGCAGGGGAGCGCCCTCGAAGCCGAGAGGAGGGGGAGGAGGAGGACGACGACGAGGCGCGCGGCGGAGGGCGCCATGGACACCTTCTTCCTGTCGCACGGCGCGCCCACGCTGTCCATCGACGACACCATCGCGGCGCAGGGATTCTTCAAGTCGTGGCTGCCGGCGGCGGTGGCGGGCGCGGAGTTGCCGCGGGCGATCCTCGTCGTGTCGGGCCACTGGGAGGCGGCCGCGCCGACGGTCAACGTCATCCGCGGCAACAACGACACCATCCACGACTTCTACGGCTTCCCCAAGGCTATGTACAAGCTGAAGTACCCTGCGCCGGGCGCTCCTGATCTGGCGATGAAGACCAAGGAGCTTCTGGAGCAAGCCGGGTTCGGGCCGGTGAAGGAAGACCACAGCCGCGGGCTTGACCACGGCGCGTGGGTGCCACTGATGTTCATGTACCCGGAGGCGAACGTGCCGGTGTGCCAGCTCTCCCTGCAGAGCGGCCGCGACGGCGCGTACCACTACGAGCTCGGCAGGGCGCTGGCGCCGCTCCGCGACGACGGCGTCCTCGTCCTCGGCTCCGGCAGCGCGACGCACAACCTCCGCAGGATGGGGCCCGAGGGCACGCCGGTGCCGCAGTGGGCGGCGGAGTTCGACGGGTGGCTGCAGGAGGCGCTGCTCGGCGGGAGGCACGACGACGTGAAGCGGTACGAGGAGAAGGCACCGCACGGCAGGGTGGCGCACCCGTCGCCCGACCACTTCCTCCCGCTGCACGTCGCGCTCGGCGCCGCCGGTGAGGGGGCCAAGGCGGAGCTGATCCACCGCAGCTGGAGCAACGCCTCGCTCTCCTACGCCTCGTACCGCTTCACCACCGCCAAGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MGQRQSKQPSPATAVHARATTTPTPTPGEDEQQGSALEAERRGRRRTTTRRAAEGAMDTFFLSHGAPTLSIDDTIAAQGFFKSWLPAAVAGAELPRAILVVSGHWEAAAPTVNVIRGNNDTIHDFYGFPKAMYKLKYPAPGAPDLAMKTKELLEQAGFGPVKEDHSRGLDHGAWVPLMFMYPEANVPVCQLSLQSGRDGAYHYELGRALAPLRDDGVLVLGSGSATHNLRRMGPEGTPVPQWAAEFDGWLQEALLGGRHDDVKRYEEKAPHGRVAHPSPDHFLPLHVALGAAGEGAKAELIHRSWSNASLSYASYRFTTAKN</aaseq>

Gene Sequence

<dnaseqindica>1..402#2543..3109#ATGGGTCAGAGGCAAAGCAAGCAGCCCAGCCCGGCGACCGCGGTGCACGCGCGCGCGACGACCACGCCGACGCCGACGCCGGGGGAAGACGAGCAGCAGGGGAGCGCCCTCGAAGCCGAGAGGAGGGGGAGGAGGAGGACGACGACGAGGCGCGCGGCGGAGGGCGCCATGGACACCTTCTTCCTGTCGCACGGCGCGCCCACGCTGTCCATCGACGACACCATCGCGGCGCAGGGATTCTTCAAGTCGTGGCTGCCGGCGGCGGTGGCGGGCGCGGAGTTGCCGCGGGCGATCCTCGTCGTGTCGGGCCACTGGGAGGCGGCCGCGCCGACGGTCAACGTCATCCGCGGCAACAACGACACCATCCACGACTTCTACGGCTTCCCCAAGGCTATGTACAAGGTCCGTCCGTCCGTCCGTCTCCTTCCCTCGAATCGAATCCCTTGTTTCTTGATTGAGAAATGGCCGTACAACGTGGAGCGATTCCGCCAAAATTGGACCTTGGTTGTTCGTTTCTTTGTTCGAGCATCTTCTACTTTGGGCATTTTACACTTTCGGAAATGAGCGCGCGGAAAACGAGGTTGAAGATGTTGGGAACACAGCCTCAAGGATTGGGTATTCGGATTTCCTACATGCTATAGGGAAGACGTCAAATTTGGATGGTTTTGATTCCAAATCGCGCAGAATATATGGGAAGAAATCGATCTTTCTGCCTTGGTTATCGGAAAACCACACTACATGGTTGCTGAAACCTGGTTTGGCAACTGGTCTGAATTTACTCGTAGGCAACACCATGGCAGCATGATACCATTTCTCCGCATGCTCATAGCCTTAGGCAGGTTTACAAAATCGGCCGTAATTGCACGGTTATTGCATTTACCTCCGGATATGGTAATGGTAATACTGCAATAACCCCAACAAATTCTTATAAATTAAAATAATAAATGAAATTTCGATAAATTTTGTATGGTTTGTCACAAATACCACGCCGTAACCTCACTTACCGCTGGGGTGTGGTAACCCCGCGCCTGATGTAGGGGAAACTGGTCAAAGGTGAAGATTACTTCTCCATATATGTTATACTACTATATTATTATGCATGGAGTATTTAGGTATCTCGTGTTGTATATTTTATATCATGTGGGACTGATTGGACTAAAACATGCTAGTATTATACTAGATCTTTCATGCTAGTTTGTGAAGTACATGTCCCATTGCATCTTAGATATGCTTATTAAACATGGGAGTAGGTCCTACCACTTAAACATGGGAGTAGGAAGAGATGCCCAAAAGTTTAGCTGATCTGAACTTTTACCAACCCCAGCATCCCATCTGATGCAGACATGACATTGTGTATTTTGTTTGAGGCTGTGAGCACAATTAGGGAATATTTGTGGGCAATGGGCATACCAAACTACTACAAGTGGGTAAAGTGCGCTTGTCACTAGCATCTGCCGGATCGTTCAGTCGATCAGTCAGCAAGGATTTTGCTGTGAGCTATGTCTAAATGGCTAATTAAATTTAGTTTCATTTTCATTACTGTGTTCAGCATTTGAGTTACTCCCTCCGTTGTAAAATATAAGGGATTTTATCTCATAATATTAGTATGTGTCACATTCACCAAAATAGCTTATATTTTGGGACGGAAGGACTAGCATATACACCATAAGATAGTTGTGGATATTACTAGTAAAGGTTATGATGGCCAAGAGTAAATATTTACGCAATTGTTTTTAAGCCAGTCGAATAAAAATGGGTGTGTACTCTGGTAATTTGGGTGAACCTGTTATCGGAGAAACCACACCCATCAAAGCTGCCGTACAAAATATTTAGTTAGGTAGTATATATGCATCACCATAAGGATTTGATTACTCATCTAGTAGCTTATTGGTCCTTTTCGTCGAAGGAAAGTTGCTACTCATAAGTATTTAGTTAGGTACTATATATATGCATTATTATACGTATGTGCTACTCCTTCCGTCCCAGAATATAAGAATTTTTAATATTGGACACAGGTATTAAGAAAGTAGTCAGAATTAAATGGGAGAGAGAAGTGCAGGTATGTAGAAAAATTGAATGGTGAAAAATTGTGATTGATTGAGAAATGAATGTTAGTGAAGAAGTTTTTATATTTTGGGACAAACCTTAAGTGCTAGAAGTTATTATATTTTAAGACGAATGGAGTACTATTTATCCATCATATATGCTCCTGTAGTCGTGTGGTTGAAGGTAGATTCATTGTTGGCGTATGATAACTTTTCAATAGAAAGATTTTGTACTCTTTTCTTATATGCAACCAAACAATTACTAAATCATACTATAACTTAAATCCATTCCGCTCAAAAGGATGCATCATGCATGGAAAACGTTATATTTCCTGGAAGCAAAAGGTATATGCGTATAACGTAATCACTACATCAGTATCTCTGACCATAGTACTGAATAATTTCATTGCATCAGTATCTACCCTTCTGAATAATGACGTTGCATTTGCATGATCGCATCAGTATCTGACCATACCGAATAATGTTGTTGCAAACAGCTGAAGTACCCTGCGCCGGGCGCTCCTGATCTGGCGATGAAGACCAAGGAGCTTCTGGAGCAAGCCGGGTTCGGGCCGGTGAAGGAAGACCACAGCCGCGGGCTTGACCACGGCGCGTGGGTGCCACTGATGTTCATGTACCCGGAGGCGAACGTGCCGGTGTGCCAGCTCTCCCTGCAGAGCGGCCGCGACGGCGCGTACCACTACGAGCTCGGCAGGGCGCTGGCGCCGCTCCGCGACGACGGCGTCCTCGTCCTCGGCTCCGGCAGCGCGACGCACAACCTCCGCAGGATGGGGCCCGAGGGCACGCCGGTGCCGCAGTGGGCGGCGGAGTTCGACGGGTGGCTGCAGGAGGCGCTGCTCGGCGGGAGGCACGACGACGTGAAGCGGTACGAGGAGAAGGCACCGCACGGCAGGGTGGCGCACCCGTCGCCCGACCACTTCCTCCCGCTGCACGTCGCGCTCGGCGCCGCCGGTGAGGGGGCCAAGGCGGAGCTGATCCACCGCAGCTGGAGCAACGCCTCGCTCTCCTACGCCTCGTACCGCTTCACCACCGCCAAGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000393