BGIOSGA000457

From RiceWiki
Revision as of 18:04, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA000457

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000457, complete gene.

LocusTag

OsI_04498

Ensembl Transcript ID

BGIOSGA000457-TA

Ensembl Protein ID

BGIOSGA000457-PA

Length

1460

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40560417..40561876

Sequence Coding Region

40561783..40561876,40561516..40561703,40560417..40560572

Genome Context

<gbrowseImage1> name=IndicaChromosome01:40560417..40561876 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:40560417..40561876 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTAAAATAAAGACAAGCCGTGTCAAATATCCTGGAGGATGGGAGCTTATTGAACCAACTATCCGTGAGTTGGATGCCAAAATGAGGGAAGCTGAAAATGACACACATGATGGGAAGAGAAAGTGCGAAGCCCTCTGGCCAATTTTCCGTATTTCCCATCAAAGAAGTCACTACATATATGATCTTTATTACAGAAGGAAGGAGATATCAAAAGAGTTGTATGAGCTTTGCCTGGACCAGAGTTATGCAGACCGTAATCTGATTGCAAAGTGGAAAAAGCCGGGTTATGAGCGCCTTTGCTGTCTTCGATGCATACAGACACGAGACCACAACTTTGCAACTACATGCGTCTGCCGGGTCCCCAAGCATCTCGGAGAGGAGAAGGATATAGAATGTGTTCACTGTGGATGCAGAGGCTGTGCCAGCGGTGATTGA</cdnaseq>

Protein Sequence

<aaseq>MPKIKTSRVKYPGGWELIEPTIRELDAKMREAENDTHDGKRKCEALWPIFRISHQRSHYIYDLYYRRKEISKELYELCLDQSYADRNLIAKWKKPGYERLCCLRCIQTRDHNFATTCVCRVPKHLGEEKDIECVHCGCRGCASGD</aaseq>

Gene Sequence

<dnaseqindica>1..94#174..361#1305..1460#ATGCCTAAAATAAAGACAAGCCGTGTCAAATATCCTGGAGGATGGGAGCTTATTGAACCAACTATCCGTGAGTTGGATGCCAAAATGAGGGAAGGTATGACATATGCTCCCCTTTCAGATGTTTATTGATACTTCTGCTCTTATATGGATACTAATATCATCTACTCATGTAGCTGAAAATGACACACATGATGGGAAGAGAAAGTGCGAAGCCCTCTGGCCAATTTTCCGTATTTCCCATCAAAGAAGTCACTACATATATGATCTTTATTACAGAAGGAAGGAGATATCAAAAGAGTTGTATGAGCTTTGCCTGGACCAGAGTTATGCAGACCGTAATCTGATTGCAAAGTGGAAAAAGGTTAGTATTCGACCCATGATTTGCTCTGTAAGATGCCCATCATTCCTTATACTCTGTGCTAGTTTAGTAAGATGCCTTATCCACCTTGTATAATCTTTAAGACTTTAATTAACTTGTGTACAAAGATAATTCAGATGAAGCCATAGACCCCTGGATACACCGCTAAGTTTCTCACATTTTTTCCCCATGCTTAGAATGTAACTTAACTGCTTGAAGCCTTGAACCATACTTTTTGTACTTGTACTATGAAAAATAAAACACTAAACTAACCGCATCCTACCATTTCTTGCAGTAAATCAATTATATTGGGTTAAGCTATCACATACTGATCTAGTTTGACATGACACATCATAAATCTTGTTTTAGAATCTAATCTATATGTATGAACCTGCGATTAATAGCTGTATGTCAAAGTTGAGTAGTGCCTTATTGGATTTCTTGCAATGAACCGTAGGAAATAGTGAAATAATGCAGCATGAGTGACGTGGGGATTTATGGACTAGATATTCTCTTATATGGGTGCACCATGAAAAATAAGATTTTGGGAGCAAAAAGAAAAGGCAGTTGACTAAAAGATGTTTATATATTTTCCGCTATGTATTTTTATTGGCATACTAGCAGCTGATGTAACCAGAAATCAAATCATGGATAGACTTCTAACACCCAATGATATTTTTTTTTCCTGGACATCTGATAAAAGTTGGCAGATTTGGGAGGGATGCAATACTTGTGTTCCATATTACTACTTTATATACTTGTCTGAACATTGATAACGAGGGGCCTAAATTGCCCTAAGAATATTGTGAGACGTACGTGACGAATTCAACTGTCAAAGTTTTCAGTCACTTTTTAGATGCAAATCCAGAAGATGCTTTTTTGTCACAAGAGTTTGTCAGGCATTCTTATATCAAATGTATCATTGCTTCTTTTTGTGTGTTTTCAGCCGGGTTATGAGCGCCTTTGCTGTCTTCGATGCATACAGACACGAGACCACAACTTTGCAACTACATGCGTCTGCCGGGTCCCCAAGCATCTCGGAGAGGAGAAGGATATAGAATGTGTTCACTGTGGATGCAGAGGCTGTGCCAGCGGTGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000457