Os08g0498400

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Revision as of 13:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0498400| Description = Similar to Caffeoyl-CoA 3-O-methyltransferase (Fragment)| Version = NM_001068678.1 GI:115477093 GeneID:4345935| Leng...")
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Gene Name

Os08g0498400

Description

Similar to Caffeoyl-CoA 3-O-methyltransferase (Fragment)

Version

NM_001068678.1 GI:115477093 GeneID:4345935

Length

4221 bp

Definition

Oryza sativa Japonica Group Os08g0498400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24681310..24685530

Sequence Coding Region

24681512..24681805,24681890..24682166,24682399..24682478,24682594..24682771,24685413..24685462

Expression

GEO Profiles:Os08g0498400

Genome Context

<gbrowseImage1> name=NC_008401:24681310..24685530 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24681310..24685530 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccatggcttgcacgaaggtgtggagaagcacgatgtacacacccaggcggctgaagcgaacgacaccggcgtcaagagtatcaagcacggccatggcggcggcgaacggcgatgccagccatggcgccaacggcggcattcagattcagtccaaggagatgaagacggccatccacagcaacgatagccccaagaccctcctcaagagtgaatccctccacgagtacatgctgaacacgatggtgtacccgcgggagaacgagttcatgcgcgagctccgcctcatcaccagcgagcacacctatgggttcatgtcgtcgccgccggaggaagggcagctgctgtcgctgctgctgaacctgacaggcgccaagaacaccatcgaggtgggcgtgttcaccggctgctccgtgctcgccaccgcgctcgccatcccggacgacggcaaggtcgtcgccatcgacgtcagccgggagtacttcgacctcggcctccccgtcatcaagaaggccggcgtcgcccacaaggtcgacttccgcgagggcgccgccatgcccatcctcgacaacctcctcgccaacgaggagaacgaggggaagttcgacttcgcgttcgtggacgccgacaaggggaactacggcgagtaccacgagcggctgctgcggctggtgcgcgccggcggcgtgctggcctacgacaacacgctctggggcgggtccgtggcgctggaggacgactccgtgctggaggagttcgaccaggacatccgccgctccatcgtggccttcaacgccaagatcgccggcgacccgcgcgtggaggccgtgcagctcccggtctccgacggcatcaccctctgccgccgcctcgtttga</cdnaseq>

Protein Sequence

<aaseq>MSMACTKVWRSTMYTPRRLKRTTPASRVSSTAMAAANGDASHGA NGGIQIQSKEMKTAIHSNDSPKTLLKSESLHEYMLNTMVYPRENEFMRELRLITSEHT YGFMSSPPEEGQLLSLLLNLTGAKNTIEVGVFTGCSVLATALAIPDDGKVVAIDVSRE YFDLGLPVIKKAGVAHKVDFREGAAMPILDNLLANEENEGKFDFAFVDADKGNYGEYH ERLLRLVRAGGVLAYDNTLWGGSVALEDDSVLEEFDQDIRRSIVAFNAKIAGDPRVEA VQLPVSDGITLCRRLV</aaseq>

Gene Sequence

<dnaseqindica>3726..4019#3365..3641#3053..3132#2760..2937#69..118#aatagcctccctctccatgctacctttgcttgtcctccgtcgctggtgaagctgtcaccgaggagcatatgtccatggcttgcacgaaggtgtggagaagcacgatgtacacacccaggtgcctcctcttctagccttgcacataatcaattaatgttgcggtgttcgttgcaacaagttttctttgttgttccaattcttgttttccttccgttgcattctggggactctcttgatcgaaaggggaataaattttgttttccatcgtccatattggtgttaatttgttacaaatttgctaagttcttattgcaatcaattagattttgttgcaatgtattaaatgcctgagattaagcttgcagtggaggagacattccaaaaaaaaaacagagtggaaaatatagtttttttttcacatcatatagctttgtgtttcgcctccaatcaactgaaacattaacaatccaattttctgagttaaattttgatttatagccatgtccatattctcgtataccatataccccagtgtgaatccaacaaaattcctttatctccttttcaaagcaggaaggttcctttccccatactcctccaaggggttgctgttacggatgtatcaacatgcctaggataaacatctctttcgtattatgcacgtgtgctcttttagtgttacaaatgggccaaaacaagcccaaacaaccactcacatgggccgttcacccgaacatggccgccagcgtaatcggccattcggtcctagccaaccaagccagtccactgcccgtcttcgcttaagcctttgcaacctaacaccaactactccctccgtccaaaaatccgtccaaaaaataaagaataaatccactttggctgccttactagtggctaaatctgattcgtatcctcggactacaataccagatatcttcacctccaattattaaaaccaatgtattttgacaccttcgacggttttaaatgacggtttcactaatgtggtggtgttgacctggtttcgtccaacatggtattgatgtggcgcttgtggcattagaataaaaaaatatgagggacccatttatcattaaaaaaatattgtggggcccacatatctttctctccttcagcaaggtgggtggcgtcatgacttgaagggagaggcggaagggagcgagacagagcgactgcgccagcacctcctaccaatgttgccagtgaagagacaagtgaggagagagacaaaagataaggaaaaaaggaggagtcatagacatgctgaacccacacgttgagtcagccgatcaaactaaatcaaagtgccacgtcagcgaaaccgctctctaaaaccatttagggattcaaattacactggttttaataaattgaaaggtcgagatatccaatattgcggttcagagatatggatcagattggagctataactgaggataggttgggtttgagcgaacttattttttagggtgtttggtttggctgtttgggccttgagaacaattgcgatgggatgatttctaaaaagcaacatttcctttagatctcggttagcttcatgaaaaaatggtggaccaatccaacttaatagtacttccttttctcttattgacatgccggtcacacccttcaaactcttagagcatgtacaatggtctttattagtggtctctctattgccatgcaagtaaatttgatgatatggaagaaagagaaaagaatatggttgttatgcatgacaacggctcagagtcgactcatagcatttattagagcaaattttgttgcatgatggtgaaagaaaggaaaggagagtaataaaaagtattttgatacattaatgattagagaccatattgtctctaactgttgtagaatgctagtctctaaataacgtagagctcatatctaactctatctttgtacatgcccttaagagaaagagcatttcgatccttgtgctaaatacatagatgagaccatcctataaataaaacgatggattctcacttgattccaagccaaacacacgcttgttttagattgatttatttggagacggggagaatagactcgatccaccagcgcggaacgcaccaacgggccatccgatcccgatcacgcggctcacaccgcacgcgccgacgcgcggaggcgcagccgacgcggatcccaaatatcccaccaacatgaccatgagtccatgacacccatccatccgcggtccatccgtcgtcacgccgcgccgctcacaacccccggcgcgagcgcgacgcgagcggcgtgatggagagcacgccgattcggtgacgcagccacaccgccatgcccatgcccatgccgcgcccacgggcaaaccgccaaccacgcaagcgcgtgtactactaccgaagaaaagaagcaaccgcacgaggaaaacaccgaaggggacggccgcgtgcgtgtgatcgatgagcggtgagccacacagtggccgcgcaccgatcgatcgatcagctgggccggccgctgcgctggggacgacgtacgcacttgtcctcatccatccctgcatctgcatgctatctgcgtgaccgcgacacagtggatgacatggcaccaccactgacactccagctgatgccggcctaagctagctgtcggcccagaaagcgtgcccatccctcgtgtatatagagcttggcagcaatgcctctcctggtaacacttctccctgtgtactgcactgcacactctaggcggctgaagcgaacgacaccggcgtcaagagtatcaagcacggccatggcggcggcgaacggcgatgccagccatggcgccaacggcggcattcagattcagtccaaggagatgaagacggccatccacagcaacgatagccccaagaccctcctcaagagtgaatccctccacgaggtacacatcagtttctagttgattaattttcgtgattttcatccccatattgcagtgcatggacgagcaatcgttgattgagatgatatgaccaaaaacccttttttgggtgcagtacatgctgaacacgatggtgtacccgcgggagaacgagttcatgcgcgagctccgcctcatcaccagcgagcacacctagtactatttgtctcctaatttatactctctctccattccaaaaaaaaaaaactaattctaagtttaaatctggacacactcctaggttttgaacctagacacatatatgttcagattcaaatctaagattaggttttttttatggaggtagtacatgctaaattcagcgtgattaattagaagctgatgatatgatgctgtgttgtgtaacatttttgttggattcgatcagtgggttcatgtcgtcgccgccggaggaagggcagctgctgtcgctgctgctgaacctgacaggcgccaagaacaccatcgaggtgggcgtgttcaccggctgctccgtgctcgccaccgcgctcgccatcccggacgacggcaaggtcgtcgccatcgacgtcagccgggagtacttcgacctcggcctccccgtcatcaagaaggccggcgtcgcccacaaggtcgacttccgcgagggcgccgccatgcccatcctcgacaacctcctcgccaacgtaagcaatagcaaagcaacgtacgtcttggtgattgcatgccagctgctcgatcatatgtctcatgtcttttgtgcattgcaggaggagaacgaggggaagttcgacttcgcgttcgtggacgccgacaaggggaactacggcgagtaccacgagcggctgctgcggctggtgcgcgccggcggcgtgctggcctacgacaacacgctctggggcgggtccgtggcgctggaggacgactccgtgctggaggagttcgaccaggacatccgccgctccatcgtggccttcaacgccaagatcgccggcgacccgcgcgtggaggccgtgcagctcccggtctccgacggcatcaccctctgccgccgcctcgtttgagatcggcgcaagccgtgtgcgaagcactgatctcggggagactgaagtggggctggatttgggctttgaatggaccccccaaatgggcctgaactgtagtataaataagcagctgcactgcaattatatcgtagcctttgtatgtttttcatgcaggtttgtgtctgagaacaaaaattaaattctagagtgatgttttatc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0498400, RefSeq:Os08g0498400