Os08g0498600

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Revision as of 13:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0498600| Description = Similar to Caffeoyl-CoA 3-O-methyltransferase (Fragment)| Version = NM_001068679.1 GI:115477095 GeneID:4345936| Leng...")
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Gene Name

Os08g0498600

Description

Similar to Caffeoyl-CoA 3-O-methyltransferase (Fragment)

Version

NM_001068679.1 GI:115477095 GeneID:4345936

Length

8794 bp

Definition

Oryza sativa Japonica Group Os08g0498600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24685696..24694489

Sequence Coding Region

24685911..24686478,24686561..24686640,24686770..24686826

Expression

GEO Profiles:Os08g0498600

Genome Context

<gbrowseImage1> name=NC_008401:24685696..24694489 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24685696..24694489 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacctaccggccgggcagcaataccctcctcaagtccgactccatcctcgagtatgtgctggacacgacggtgtacccgcgggagcacgagcgcttgcgcgagctccgcctcatcacgcagaaccatcccaagtcgttcatggggtcgtcgccggaccagatgcagttcttctccgtgctactcaagatgatcggcgccaggaacgccgtcgaggtcggcgtcttcaccggctactcgctgctcgccaccgcgctggccctccccgacgacggcaaggtggtggccatcgacgtgagccgggagtactacgagctggggcgcccggtgatcgaggacgccggcgtcgcgcacaaggtcgacttccgccacggcgacgggctcgccgtgctcgaccagctgctcgccggcggcgaggggaagttcgacttcgcgtacgcggacgcggacaaggagcagtaccgcgggtaccacgagcggctggtgcggctgctgcgcgtcggcggcgtggtcgcgtacgacaacacgctgtggggcgggtccgtggcaatgccgcgcgacacgccggggagctcggcgtacgaccgcgtggtgcgcgactacatggtcgggttcaacgccatggtcgccgccgacgaccgcgtcgaggcatgcctgctccccgtcgccgacggcgtcacgctgtgccgccgcctcaagtga</cdnaseq>

Protein Sequence

<aaseq>MATYRPGSNTLLKSDSILEYVLDTTVYPREHERLRELRLITQNH PKSFMGSSPDQMQFFSVLLKMIGARNAVEVGVFTGYSLLATALALPDDGKVVAIDVSR EYYELGRPVIEDAGVAHKVDFRHGDGLAVLDQLLAGGEGKFDFAYADADKEQYRGYHE RLVRLLRVGGVVAYDNTLWGGSVAMPRDTPGSSAYDRVVRDYMVGFNAMVAADDRVEA CLLPVADGVTLCRRLK</aaseq>

Gene Sequence

<dnaseqindica>8012..8579#7850..7929#7664..7720#tttttccccgttttcccgagtcccccacgccctctaccgagctctccacgccgatccccttcgccgccgctcgccggcgatctccagccgcccgccaccgccgctcccgtcgctgccgcgctgcgccgccaccacctatagcatcacaccaccccaccgcaccccggcatccactccatctccctcctccaccgccggaaccaccttcccatcgcgaggccgagccactaccgccacacaccgccttcagccggccgctgccgctgcgttagtcgtcgccgcacctcgccgcttgcgccgtcggcaacgccgtgccaagctctaccccggcctccgctccgtttccccattccaccaccgcaaccacccttccaccgtgcatcccgagccacctccaccatacgccgcctccagccgtgtgccaccgtcgccttagccgccgccgcgtcgctccgtcttcacctctcgcctcgcagcgccgtgcagcacctcggtcaccgttgttcatcgccggaaacccaccggaacgtggtacctctcggtcgccggtgagccccaccattcctctcctctctggcgtggtattctcgccgctccggtcgcctatttccctccctaaccgctccaataatttccctaggtcttgccggccctcggccgcggctccgccatggtcgggcgtcgtcggaccgccgttcccgtcgcctcccgtgtcggccgccgccatcctttccgccgccggtcgcctccccatggtcgtcccgtcgccggcgctcctcggtgaggacccccttcatctcctttccctttcccctcttttcgtcgcctcccgtgcgtgccgtcgcgccggtggtcgtcgccggcgaccatcgggccgtgcgccgtcgctcccggccggccgaccggtgagctggctcccgctcgcccgtggccgcccgatcctccttcggggcgatctgggccgtccacgtggccttcccgtgccgcccgcgtcggtgcctctgtggcgccacgtcggcgccacctccgctagccgtccgtcgtggccgccacgtgtctgccacgtggtgcgcccgcggaccagcgcatgcgtggactcggtccacggtgcgcccgccacccgtgagtcaccgtcaggtggggcccgcttgccggcgccacctctcccccgtcggatgacgtcataattgatttaaattgcgcaataaatcggtaataattctagaaattcattaaaatggctcaaaaccttctaaaattcatatctaattcattcgaactccgaattgagccattcaacttgcaaaattcatctaaaattgagctctacatgtttgtttactttttatgtactgttttcttggtgtttattagagtttttcctcgttttgcgtgccagcgtgtagtttccgtcgtttcggaagtccgcggtcgcgaggaaaagagttcagaagatcaaagtgaagaagcaaggcaagtcacacattctccttgagcatgttgatcccaatttataaatgttttaccgtttacaaataaatatgcatgttttgctaattacatgggatcagggttttcctatctgctcgcttgcgccatgtttacttgatatctgttctttgtcaaccttgggtaataaattgactagcttgtgttacttatgtgacctagctagaactatatgcttagccatgcttaattaccactagctcagtcgatgggataattgcagtattagacattctagtatcttgttgagctgcgtgctcgagacatctggccatgttttatggtcgtaattatccaactaaaatgcgactgaatggtgggctgtggatgcatggttttgcgagtcgcacccatagcaattaaggaccggttcacgggaaaccctggaagacttacagcgcttgccacaagcgggaatgggtaactgcttgatctgaagtatagctcgaccctttcctaggcaccggtggcgagggtgggcgtgatggagttgggtcggccggggtgtccggttgtccagctgccggattcaccgcggcgcaagaggggaccgcccactgccttttgaggggtgggggtgaaaccttagcgtggtgtggatggttaggggagggttatgcgaagggtctcgtcacaatcactcgacatggtgacgtgtgcatcatgggcacatgatgacgcggtgacatgtcggtgggttgtgtcttgtgggtacagttgtgcacctctggccagagtaaaactattcgaatagccgtgcccgcggttatgggcgatcgaccagattcaccgtgattagtctcacacctaataaatcgacccaatgcactgtagtacaggtgggttggttgggcctgttcaacgtggtgtagcgttgatcagtggagatttaatattactttaattactcaacagttttactgttttgctcaataaaatgttttacaaccgcctttatgcaaatagccacaaaccgtccttgtgttcccccttgcacgtctgcatcgttggtgtggcttgctgagtacggtggttgtactcagccttgctattattcccccttttcagaagtgtagtgcttctgagctgaagatggagttagaggaccaaggctcagaccccagttgagttttgcctgtggagtggagctgaagccccgctaggatcgcctttttccgctgctgctgcttttgtttcggtgtgaggactaagtgcctcttctgtaagtattttacgctttatttacgtttggaactgtttattacttgtcgttttgtgtaccctggctggtcctggacagggatttaatacacaaaatagtctggaaatttgggctaaatttctgggcgtgacagcccaagaccgcaacaggatatgattccatctgggtgatcgtagaccgactcaccaagacagcgagattcattcccgttaagacaaattatagcagtgccaagctagtcgagttatacatgaccaggatagtgtgtcttcatggtatacctaagaggattatatctgatcgaggcacacagtttacctcgcatttctgggagaaagtacatgaagccctaggaagttaccttgcgtttagcacagcttatcacccacaaacagatggccagacagagagaacaaaccaggtcttggaggacatgctgagagcttgtgcattggattttagcaaagactgggagagatgtttgccctacaccgaattctcctacaacaacagtttccaagcaaacctaaagatgtcgccaaatgaggcattatttggtcgacgatgtcgcaccccgctaatgtggtccgagactggagaacgggcggtatttggacctgacattatccaagaagccgaagaaaaggttcgcttgatccgtgaccgtttaaaggtggcacaatcacgacaaaagagttacaccgacacccgaagaagaaacctagaatttaaggaaggagattacgtctatctaaaggtttctccgatgagaggtacaaaaagatttaaggttaaagggaaactagcaccaagatatgtgggacctttccaaatcatcgctagacgaggagaagttgcctatcagttacagctaccaaaaaatatcgccgatgtacacccagtcttccatgtgtctcaattaaagaagtgcttacgagtgccgaaggaacaagctacgttggaagagattcatcaccgcgcgcgtcccatcaccgcctcgcgccgcgcgccaccactgccgtgccgtcgccgtcgccgtcccgtcgccgcgcgcgttccatcgccgcctctcgccccgtgccgccgcgccgccgtcgcgtcacccgcccctctctcccctcttccccttactcccccctctcccctataaaagctccaccgttctcccctctcctcactccatctccccctcctctgcctcttccccttctccacgcgccgccgtcgtcgtgccgccgcgtcgctgcctttgagccgccgcgccgccgccctcgtgctgtcgtgccgccgcattcgtgccaccgcgccaccgcctcagtgtgccgcgccgtgcgccgtcgtcgccgccgccgccgtcggtgagctgctgccccccctgtttgtcgccgtgccgccgggtagagagggagccgagagagagagaggaagggagaagccgagggagagaaagaagaaggaaggaggagagaaaccgggaggaagagagagagaaagaaaaagaaaagaaaagagagagaaggaaaagaaaagaaaagaaaagagagagagaaggaaaaagaagagagagagggaggaaaaataaatagaaattagagggagattaggaaagtttagaaaatttaaaataattagaatttaattatagattaattatagtcgtagaattgcaaaatttaatataaattatggattatccttggaaatttctataagaaatcaatttgcggtagtgatttagatgtaattaacaactaaacaagtagaaaaatccttatagattattatagattatttttgggtaatctctataagtaatcgattcacggtagaaattcggatttaattactagggattttagccgtgtattatatttaatcatttagtcatagactaaattaaatcgtataataattttaggattttgtccgatatttagctcgcgatagaaatttctaacctattatatggatataatgcccgggtagattaaattaaaaacttatggtaacaaaatatgtatacccgcaaaaaatagtttaggatgtataaatcgaaattgggtttgccctagttcgcaaatagtaaagttaatataaaagaatcgactttcgcattcgacttccatttggatttatttggatttttatttgaattctaaccgaattcaaatcaatttttgcatgtaactatagagcccgagggagttgcggatccaagtgaaagccaagacccgcaagactttgagcaaggcaagtcatcactattccttgaacatgttggtcccaattgcgaaattgttttgtttacaaataaaattgcatgcaatgatgaacatcctacttgtgattatgccatgccttgattattggttgccctttattccttcgtaaccatatttacgtatgagtccctagtcaattatgacaattgcttagaaatgctattctaaaatcatacatactcacatttatcaaatgttatatgcttgggcaattacctttgggaaggtaattgagatgcggcatgtagagacatgagcgccacattgccatgatgttgatgacatgatttgtgaaaggagaaataaaattaaacaattgttttcgactggggcggacggtggatttgggtggtatctgggaaaggctagtaccgtccccggtcaattaaggaccgagccatgaagttaagcatgaaacgacccccgtacaaccgcacttctcgtatgggtatagacctagcggattagatagccgagcggaggcagtatccctgcatagatggttcacccctgagtgaggtaggtgcgctatggtggggtagccgttgaggtagggccgagaggcgtgccctacatcggtgtcgccatcggtaggactgccatgagtgtgtgagagagagaacttaacttgaaccataatttaatatgtgtgtgagacttctctttcccgggagcgccagaactcctctcactgctagaaacatggacgcctagagtgcatgaggatttaagttcatggagcgggtactgccaatgcgaggttatcaaaaagctttgccgtgacgcgtctcatgtgttgggacgaggctcatgtgttgggcagtcgcggagtgcgggtaaagtgtacatccactgcagtgtgagtaaaccaaatctattcgaatagccgtgctcgcggttattgagcaccgggacatgtattacacttggctagactctaaattcttaacttatgtgggatgggatattgcatgatgatttttatgctgatggagccacttcctgagaggcgggaatgtggacgtcctcagaaaaccatgacgactcaatggcgggaagctatccttgggatcacaatggatggtggacagaaccgtcgttgtttaatgtgaacgctggtattaaaatttgatcagtctatgctagatcttaggcttgtgaaaagaattacaaaacttgctttgcgcaaaagaactatagccatcctttgaattcccctgtcatgtgcattattgctgtggtggcttgctgagtacggttggtactcacccttgcaatatacaaatttaatcagaggtcggagatgaagcttcggaggatccctacgcttactaacaggagggtgatgaagacgatggcgcccagtaggtcttagttacggtcattgcctgtggcaatggcgtgccgctgccttaactccgctgccttaccttcttctgtttttggaatgtattccggaccgctcggtccgatgatttaagactatgcctgcgggcttatgatgcaatgattcatactagacactcgtgtatgtgcacttgatatttcagctaagaattcgtgtgtaccagactacttgatccagggaaatggtactgtttacacgattgattcctgttataaaaacgggggtccacatagatccgccactgctccctcctttccttcatatttagactttaataatttggattttcacaaatgttatctaaataattaaataaatatcatgctatcgaagtatattacataaacataagtattaaactttctttcattatgatttaacaaaattgctagaatgctagaaaatttttgtcaaaactttcagatttgttattattggatcattttaagatgggtgcattgaatagaaaaataattgctagaaagaaatttcacataggctacggataagatcccggtgctagtcaactaaactagtcttaaatacaggtttatatcagttatactgtagctataacatagccacggtataaattaatgtaattacaatgcggttatagtgcagttacaatgtaattacactcaattacattatagttacatttgaaagttttccctcaaaaaacttgatagttatttttttaagatactctaacgatttaatcatctcaaaatttttaataattaaagttatagatgaaccggtaacaattattacctctgtttcaggttaatatgtcaaagtcaaactactttaagtttgactaaattatagaaaataaacattttcaacccatgttagatttattataaaaatatatttaattattgatttaataaaactaatttggtattataaatattactatagttatctacaaacttagtaaaattgaaagtagtttgattttaactaaagttaaaacttctaataacctaaaatggagggagcacaccatattttataccaaagtactgtcagcaattagctgatcggtagagacgctgagtaactgcacgttcaggtcatcacgcgacctaccaatttaacaaaacgccgtgtcgtcttgttcttcttcttatctttttttttagtcattaattgatctgcaatactcatgtaagaggtccagatagctagagaggccattgagagatcatcatcggagctagctagctagccatggcgacctaccggccgggcagcaataccctcctcaagtccgactccatcctcgaggtacgtatagactcgcggatgtgtaagcgcgatgtacgtgtgcagtggtgtgtgtttcatgttcgtttttttggaggaagagatcgaaaaaatgatggagagatgcatatttgtgtgtgcactttgcagtatgtgctggacacgacggtgtacccgcgggagcacgagcgcttgcgcgagctccgcctcatcacgcagaaccatcccaagtgcgttgcataatcgtttttttctttttctttggcttgtcacgtcgacgtcggccgttttaatttacgtacgtacgcacaggtcgttcatggggtcgtcgccggaccagatgcagttcttctccgtgctactcaagatgatcggcgccaggaacgccgtcgaggtcggcgtcttcaccggctactcgctgctcgccaccgcgctggccctccccgacgacggcaaggtggtggccatcgacgtgagccgggagtactacgagctggggcgcccggtgatcgaggacgccggcgtcgcgcacaaggtcgacttccgccacggcgacgggctcgccgtgctcgaccagctgctcgccggcggcgaggggaagttcgacttcgcgtacgcggacgcggacaaggagcagtaccgcgggtaccacgagcggctggtgcggctgctgcgcgtcggcggcgtggtcgcgtacgacaacacgctgtggggcgggtccgtggcaatgccgcgcgacacgccggggagctcggcgtacgaccgcgtggtgcgcgactacatggtcgggttcaacgccatggtcgccgccgacgaccgcgtcgaggcatgcctgctccccgtcgccgacggcgtcacgctgtgccgccgcctcaagtgagatcgaccgatcgatcgggcaatcttagaaatgcgctagagtgtctataccctctcggtctcaaaataaaacaacctcgtagtagtatgatgtttattttaggacattgtaataggtggttgatttattttgcgtaggagagagtacgttgctctactgttgctgttgatcttgtcgtacaataattgaagttcaaattcaacgtcaacttttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0498600, RefSeq:Os08g0498600