BGIOSGA000535

From RiceWiki
Revision as of 18:04, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA000535

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000535, complete gene.

LocusTag

P0506B12.21

Ensembl Transcript ID

BGIOSGA000535-TA

Ensembl Protein ID

BGIOSGA000535-PA

Length

1193

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39260619..39261811

Sequence Coding Region

39261362..39261811,39261085..39261258,39260619..39260999

Genome Context

<gbrowseImage1> name=IndicaChromosome01:39260619..39261811 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:39260619..39261811 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTCCGCCATTCCTCCTCTGCCTCGTCGGCGGCCTCCTACGGCAGCGACGTCAGCTTCATGAACCACTCGCCGGCGGCCGCCTTGCCCGCCGTCCCGACGCAGATCCCTCGCGTCGCCGGCGGCTACCTCGACGGCAATGTTAGCGGCGGGTTACCTCACTTCGGAGGGGCGGTGTCGTCGTCGTCGTCGCCGCCGTCCTACTCCTCGTCGCTCCCTTCGTCCTACTACAACAACATCCAGAGGAGCATCAGCTCGCACTCCCTCCCGCATCACCTCCAGCTCACCGACCACTTTGGCGGCGCATTCTTCTCGTCGTCGTCGTCCTCCTCCCACCAGCTGCCTCTGCCGCCGCCGCTCTCCTCCTCGCCGTCCTCCTCCTCTGGCGACCTCTTCGAGTTCACCTCGCCATGCCCCGTCCGCCGCGTCTTCAGCACCGGCGACCTCCAGGGGATGAACGGATCGTCGCCGCCGCGGCCGCTCCCGTCCGGCGAAAGCTGCGGGCAAGACGGCAGCGGGCCATTCTCACAGAAGGTCGGGCGGTACAGTGCCGAGGAGAGGAAGGAGAGGATCGAGAGGTATCGCGTGAAGCGGCATCAACGCAACTTCAACAAGAAGATCACTTACGCGTGCAGGAAGACGCTGGCGGATAGCCGGCCGAGGGTGAAAGGCCGGTTCGCGAGGAACGGCGAGGCCGACGCGGAGGGCGACGAGCGGGAGGCGTTCGACGCGAGCTACAGCTACGACTACTCCGCCGCGGGCTACAGCGACTACCGCAGCGGCAGCAACAGCAGCAGCGTCAACAGCTGCTACAATTACAACCGCAAGGACGGCGCCGCGACGGCAGCGTCTGTCGTCGGCGGCAGCGACAATGGCGAGTGGTGGTGGCGCGCGCCGGGCGCCACCACCGCCGAGGCGGAGCGGCAGCGGCAGGCCGGCTTCGACGTCGACGAGGAGATATGGGCCACCCTCGGCGACATGCTGTCCGTGAACCTCGCCTCGTAG</cdnaseq>

Protein Sequence

<aaseq>MFRHSSSASSAASYGSDVSFMNHSPAAALPAVPTQIPRVAGGYLDGNVSGGLPHFGGAVSSSSSPPSYSSSLPSSYYNNIQRSISSHSLPHHLQLTDHFGGAFFSSSSSSSHQLPLPPPLSSSPSSSSGDLFEFTSPCPVRRVFSTGDLQGMNGSSPPRPLPSGESCGQDGSGPFSQKVGRYSAEERKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFARNGEADAEGDEREAFDASYSYDYSAAGYSDYRSGSNSSSVNSCYNYNRKDGAATAASVVGGSDNGEWWWRAPGATTAEAERQRQAGFDVDEEIWATLGDMLSVNLAS</aaseq>

Gene Sequence

<dnaseqindica>1..450#554..727#813..1193#ATGTTCCGCCATTCCTCCTCTGCCTCGTCGGCGGCCTCCTACGGCAGCGACGTCAGCTTCATGAACCACTCGCCGGCGGCCGCCTTGCCCGCCGTCCCGACGCAGATCCCTCGCGTCGCCGGCGGCTACCTCGACGGCAATGTTAGCGGCGGGTTACCTCACTTCGGAGGGGCGGTGTCGTCGTCGTCGTCGCCGCCGTCCTACTCCTCGTCGCTCCCTTCGTCCTACTACAACAACATCCAGAGGAGCATCAGCTCGCACTCCCTCCCGCATCACCTCCAGCTCACCGACCACTTTGGCGGCGCATTCTTCTCGTCGTCGTCGTCCTCCTCCCACCAGCTGCCTCTGCCGCCGCCGCTCTCCTCCTCGCCGTCCTCCTCCTCTGGCGACCTCTTCGAGTTCACCTCGCCATGCCCCGTCCGCCGCGTCTTCAGCACCGGCGACCTCCAGGTAATATAAGCTGCATGCAACAGCTTGAACTGCACGGTGCACACTTCCAATCGAGCTGCGTTCATGGAAGCTCGACTGACGAATTGTGTCCTGACGAAAACAGGGGATGAACGGATCGTCGCCGCCGCGGCCGCTCCCGTCCGGCGAAAGCTGCGGGCAAGACGGCAGCGGGCCATTCTCACAGAAGGTCGGGCGGTACAGTGCCGAGGAGAGGAAGGAGAGGATCGAGAGGTATCGCGTGAAGCGGCATCAACGCAACTTCAACAAGAAGATCACTGTAACCATTCCCCTCCTCCACGCTCAAAAATTGCACTCTGATCGCCCATTATTCGTGCTGACGCTTTGGTTGTGTTTGGGGGCAGTACGCGTGCAGGAAGACGCTGGCGGATAGCCGGCCGAGGGTGAAAGGCCGGTTCGCGAGGAACGGCGAGGCCGACGCGGAGGGCGACGAGCGGGAGGCGTTCGACGCGAGCTACAGCTACGACTACTCCGCCGCGGGCTACAGCGACTACCGCAGCGGCAGCAACAGCAGCAGCGTCAACAGCTGCTACAATTACAACCGCAAGGACGGCGCCGCGACGGCAGCGTCTGTCGTCGGCGGCAGCGACAATGGCGAGTGGTGGTGGCGCGCGCCGGGCGCCACCACCGCCGAGGCGGAGCGGCAGCGGCAGGCCGGCTTCGACGTCGACGAGGAGATATGGGCCACCCTCGGCGACATGCTGTCCGTGAACCTCGCCTCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000535