BGIOSGA000539

From RiceWiki
Revision as of 18:04, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA000539

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000539, complete gene.

LocusTag

P0460C04.38

Ensembl Transcript ID

BGIOSGA000539-TA

Ensembl Protein ID

BGIOSGA000539-PA

Length

1203

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39196495..39197697

Sequence Coding Region

39197693..39197697,39196919..39197074,39196708..39196834,39196495..39196635

Genome Context

<gbrowseImage1> name=IndicaChromosome01:39196495..39197697 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:39196495..39197697 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAAGACACGTGGTATGGGAGCTGGGCGCAAGCTCAAGACCCACCGCAGGAACCAGAGATGGGCAGACAAGGCCTACAAGAAGAGCCACTTGGGTAATGAGTGGAAGAAACCCTTTGCTGGGTCATCTCATGCCAAGGGCATCGTTCTGGAGAAGATTGGTATTGAGGCCAAGCAGCCCAACTCTGCCATCCGTAAGTGTGCTCGTGTGCAGCTTGTGAAGAATGGGAAGAAGATTGCTGCCTTTGTGCCCAATGACGGTTGCCTGAACTTCATTGAGGAGAATGACGAGGTGTTGATTGCTGGATTTGGTCGTAAGGGCCATGCTGTGGGAGATATTCCTGGTGTCCGGTTCAAGGTCGTCAAGGTCTCTGGTGTGTCTCTCCTTGCTCTCTTCAAGGAGAAGAAGGAGAAGCCGAGGTCTTAG</cdnaseq>

Protein Sequence

<aaseq>MGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLVKNGKKIAAFVPNDGCLNFIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS</aaseq>

Gene Sequence

<dnaseqindica>1..5#624..779#864..990#1063..1203#ATGGGGTAAGCTCGCTGTCACTCTCCTGCGGTGGATTTTGTCTGTATAGGTTTAGCGATCTGGAATGGTTTAGTCGAGTTCCCTCGTAGCTGGATGCTTGAATATACCACTTGATTTTTGTATGCGTCATACTTGTATTTTGGTAAATTTGCGTGTGATGATGGAACTCAGCTTATTGACGGTCCAGTGCTGATCAGATTATAAACCGTCAACACTAAACATATTCATAAGCGATATCAATCCGTTGCTGCTGTGTAATCAGAATTTCTTATATCAATTTACTTGGATCTGGGAGGTTATGCATGGTAGCATACACTGTTATCATTTTTATTGTTTAAAGGAATCGCCATTTGTTTAGCTGTCAAATCTTAAGCCTGACTTTGCAAACAACTATCGACTTCTGATGGCAAATTTATTACATATTATGTTCATCAAAGAACACTGTTTCTTATGCTTGCTAATAGTCTGTATCTGGATGGCATACCCCTTTCAATTATTCATTTCATCCCTTTACATTGTGCACGCGTTCTTTTCTAGCACTATGTTATATGTCAACCATCGAATTGTAGATCATAATATTGTTTTAATATAGTTGCATTGACCATGAATTCTTCAAAATGCAGGAAGACACGTGGTATGGGAGCTGGGCGCAAGCTCAAGACCCACCGCAGGAACCAGAGATGGGCAGACAAGGCCTACAAGAAGAGCCACTTGGGTAATGAGTGGAAGAAACCCTTTGCTGGGTCATCTCATGCCAAGGGCATCGTTCTGGAGAAGATGTATGTAGAAACTATAATATGGTTTTGTCACCCTTTGCCTTGTGAGTTTATGCTAATGTGAGAAATTTGATGGCTCTATTGCAGTGGTATTGAGGCCAAGCAGCCCAACTCTGCCATCCGTAAGTGTGCTCGTGTGCAGCTTGTGAAGAATGGGAAGAAGATTGCTGCCTTTGTGCCCAATGACGGTTGCCTGAACTTCATTGAGGAGAATGTACATTCTTTATCCTGAACTTCTTGAATGTTTGCTGTGTCACCTGTACTTATTTCTCATGTCATTATCCAGGACGAGGTGTTGATTGCTGGATTTGGTCGTAAGGGCCATGCTGTGGGAGATATTCCTGGTGTCCGGTTCAAGGTCGTCAAGGTCTCTGGTGTGTCTCTCCTTGCTCTCTTCAAGGAGAAGAAGGAGAAGCCGAGGTCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000539