Os08g0499700

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Revision as of 13:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0499700| Description = Similar to Pherophorin-S precursor| Version = NM_001068684.1 GI:115477105 GeneID:4345941| Length = 5469 bp| Definit...")
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Gene Name

Os08g0499700

Description

Similar to Pherophorin-S precursor

Version

NM_001068684.1 GI:115477105 GeneID:4345941

Length

5469 bp

Definition

Oryza sativa Japonica Group Os08g0499700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24753813..24759281

Sequence Coding Region

24754365..24754784

Expression

GEO Profiles:Os08g0499700

Genome Context

<gbrowseImage1> name=NC_008401:24753813..24759281 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24753813..24759281 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccccgacgccatctccgccgccaccgacgagctcgaccaaagcgcgcttgggtggcggagcgcgacctgccccccaacccccacccacctcacctacatcgacggggcggcgtcgcgttcgtggccgctccacgccaggcagcacacggtggtcgccgccggctacgacgtccccacgggcgcgctcgaccatgcgtcctctcgccagccgccactcggcggcatgcgccgctatcacttcaagttcaagctgctatcgttcggggtcagagcggcggatgttccacctgtcgatgaagatggcggcgcctggggatgaacaagcatcgacggcgacggcggcggcggtggtggcggcggcggcggcggccgacgcggtgggggacagagagggtgtgggtgtgtggatcggctga</cdnaseq>

Protein Sequence

<aaseq>MAPTPSPPPPTSSTKARLGGGARPAPQPPPTSPTSTGRRRVRGR STPGSTRWSPPATTSPRARSTMRPLASRHSAACAAITSSSSCYRSGSERRMFHLSMKM AAPGDEQASTATAAAVVAAAAAADAVGDREGVGVWIG</aaseq>

Gene Sequence

<dnaseqindica>553..972#ttattgaatcctcctgtacagttgcattcgggtgaaatccaattttgaggaccacgacgcgaaatcccaattttccccaccagccgccgccacctcggccaatgcgccgccgcgccggtgctgctctgcacggccaccgcgcgcgtgaaccgttgcctcgcctcgatcggtctcgcccgctccgctttcacgccgccacccgcaccttcgctcgatgagggttagagcctctccacctcccttcccccaatcccaatccgctctcgcgtctcactgcgcatcatggccggattggcggtggctggccgctcgcttgacgaggcgttcgaggtgaccagcgcggtggacaacatcggcgcctgggggtggctcgacgtgcagggatgtcggcggagtttgaagcggctgggcacccgatcgagcatgaggcgagcatggctggaccgcgccgtggactcggagggcaaggctcacgcgcgcgacatcgtccgggagatcatctcccgcggcacggatgattggatagtgcggcggtgaacatggagtggggcgatggccccgacgccatctccgccgccaccgacgagctcgaccaaagcgcgcttgggtggcggagcgcgacctgccccccaacccccacccacctcacctacatcgacggggcggcgtcgcgttcgtggccgctccacgccaggcagcacacggtggtcgccgccggctacgacgtccccacgggcgcgctcgaccatgcgtcctctcgccagccgccactcggcggcatgcgccgctatcacttcaagttcaagctgctatcgttcggggtcagagcggcggatgttccacctgtcgatgaagatggcggcgcctggggatgaacaagcatcgacggcgacggcggcggcggtggtggcggcggcggcggcggccgacgcggtgggggacagagagggtgtgggtgtgtggatcggctgagcgagcccaacatgctcgtttagcccggcccagttatcaagaagaggggcaccagatgcgcccaatcccaagacaaccatttttcccaaggaaaaaaaaaggaaaggaaaaaaaaaacaatcgtcttcaagcttcgggttcccgctcagcgcggcagcggaaccaagccgagggagctcgactcatcgacgatcacggtgtccagtactttggaagaatcagcctatcctgcccgcacccgccatctagtttctggaggatactattccgccggtgagcctcgaaagaacatcgacaattcttgtttcttggatgttttgctctgttcttggggttggtcttctcctttctgctgcatcagttcgggccgttctgcacctttagttctatagttcttggggttgatctcccatttcttcttcttgttttgctctggatcgcctgggggcgttgtgccgcaagttcttggggacattgtgtcgcaagatcgtgttgttgatagagaataatccaactgttagctcaagaaatctctgaactagctgattctgatgaaaaaattaggacttgttttgattttgtttttctttgtatcagttattgattttgttggggtcggactcctctctgcagcattttctcttctgcattgtcctttctattctgtatggtcctcgtcgcgggagatattgttctgccggtgatcttgaggaatcactggaatcagaaaactcggtttgtttctttttttaacagtaaacggcaagagaattgccggctatattagaaggatagagaagagttttacatcacataggatagtagcagcaaatacaaacaactaggaaaaaaaccaacagagtggcgaacaaagctaaagggaagaaaattaaggcggcttaaaggtgaactctctatcgttaatatcctctaggatggcagctaccgtttggtcgatttggtgggtattcgggggatggcctttaaaaattttctcatttcgcattagccaaatgtgtcaccaagtcgtaactagggctcccatacttcttcttgcttgtgccttgtttgaggaggagcagatgttcgaggtccattcttgtatgttatcctgcatagaatggccggggattccttttattttgaaactcggtttgtttcgattatttggttttgtttccagtttttcttgtcggtctcctggaaattgttctgctgctgccggtgcattgctgctgcggctgattgatgcttaattcttttgcgcattccaaaacaaaaaaaaaatctgctgcggctggagagaacaccacaatgggcttgtttcttgtaaaaaaaatcaatttctttttattgtttggggctggtttctgctgcggctggagggagcacagttaattttgattcttaccatagcacgatttgttttgattcttaggatgtagtttagttcttaattattattttgattttactacgccttccctgtggctgcagaggataatttgctgaccttgttgctgttggaggaagtatcttagtgttgataatgggcaggcgcaaaaagaaaacaccagctctcacaccgagggtatgatcgtcgatcactttttttctatctcctgtaatttacggtctgctaacgaattgatctacccattttcaacctgtgaatgcaactgaactgatctttctattttaccttcatcctcctttggcagaacacagtaactctatatcttgatggaacagaacatgaatttgttgagaacttcatacattgccaggggcactacagattctggctcctgtggaattctgctttcagggtaacatatagccgaatgatgctatatacaacaccagtccacgggacattctattatgtccttaggtatgaagcagaatacgttgtactagtgattgatgctagaactggctggcttgttgggttcttcaacaacagaggcatttatgagatgcggtctgatgataatcttgggagttatatgaattcgtcacaatgtcataagcttccgttcaatggaaatcataaggaaatatccccacatgggacagaaaatacatggctgaatctgcaactgttcaaaaaatgttttcgttatctttcctcttatcagcctagcaacagaagagtcccaattgggttcaagatttcattgggcatgatggtcgtaatgtttttggaatcaaaattcaaaatggtgcataaaaaggatatgccatgccatggagcatggtacggggtcacggttaggtgatggttttgaatgggtcaagaggctaatcgtcaattggagttcaatcagccaacaggttatgaggtctcttagcaatcaaagatacaatccccacgattgtggcataagagaattgcttacttttgatgatcttctgaaaagcacattttatcttcatgtcgatgcttatttggagggaattttcaaacatactgcattaccacccccaccacgagacctgagctggtgtcctgtatgtagatcttggcggtgatggggaggaggatattccactgcctcgagagccacagcccacgccacgcagtgcagtgcacaggagaggtcagcaacagttgacaaaaaagaagggtctatctggaggcaaacttggaggtcctccagttgctccagaaattttcttaagatggagtttgagtgatgtaagtatcgattcctttgcatattattaggcagatagtatttggcttatcaattcaactgtcaacttatttcatttacatatgacaggaccaggagaaatactatgatgagctggtttcatacctcgaggaggagcttgggttgaaaatgcataaagcaagacgttttgatcttgattgtaccaatcatcttgtgaagcatcatcctatgctgcctgaccgaaatttatcagcacaagctcagatagacagtgatacaataaatgaatcaccacaagctcttcccacaaacattagttctcagattgtcagctgttcagtagatgaagcaccgcaggctctccccactagcagttctccgataagcaacaacacagaaggtctatcactccaggctctcccaacaagcagtgaatcagcggcaggagtgacgatagatgatctacactctttttgctctcaggagtttatcactgacccagtgaacaggttatcagatagaattgacagcgaatatgtcttgcttgtgaatcctgcaatgccacatctgctaggaaactcctcagatgctactgatcttgattgtaccaatcaacttgtggagaatcatcctaagctgcctgaccaaaatttatcagcacaagctcagatagacggtgatacaattaatgaagcaccacaagctcttcccacaagtgttggttctcagattggcggctgttcagtagatgaaacactgcaggctctccccgctagcagttctctgataagcagcaacacagaaaatctatcaccccaggctctcccaacaagcagtgaatcagcggcaggagtgacgatagatgacctacgctctctttgctctcaggagtttttcactgacccagttgtggtccatgctttcaacaggttatcagatagaattgacagcgaagatgtgttgcttgtgaatcctgcaatgtcacatctactaggaaactcagatgctactgttgtgtcaacccagctacagagtctaggactcccctctcgaaaactagtccttttttccagtgaacagtcaggatccccatctgttgggtgaaggtacacactggagcctcctagtgtttgaccgcaaccttggaggcagaccatgcttagcccaccatgacagcagtcctggtgatgctaatttgagagctgcacgccgtcttgcggcatcactgcttccttacctacctcctgagacgaaatgcactaaagctccgacacctaagcaaaacaatggaaccgaatgtgccctttacatgattaaatgtgctgaggtgatctgtggttggtggcgaaaccacgctgctggaggatcagagtcgcattggcttggagttgtggcccgaggtgttaccatggacagcgtggacaacttgagggcacagctaatccatgatattggacagctcctcaacggctcatcatcatcatagagtcatactcttacttgtgtatgcttgtgctattgttgtgattacactttgccgccttccaaccggaaggttctcatattcaccctttgccgcctttgaaccgccgaccaagtgttcctttctcacaattcaatgatccgaaaggtgatcactcatgaaaaaattggttcaagtctggtcaggccactgcaacttaatgggaaaatgccgcaaaactgcaagttttcaggtaggtgcttgtaactcaatctcagagttgtcatgaggccactgtaaccttttgtaatcaggtcaacgtcgttgttttctatatcgaaagttcttgtttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0499700, RefSeq:Os08g0499700