BGIOSGA000682

From RiceWiki
Revision as of 18:05, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA000682

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000682, complete gene.

LocusTag

P0415A04.10

Ensembl Transcript ID

BGIOSGA000682-TA

Ensembl Protein ID

BGIOSGA000682-PA

Length

882

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36811636..36812517

Sequence Coding Region

36812358..36812517,36811636..36812219

Genome Context

<gbrowseImage1> name=IndicaChromosome01:36811636..36812517 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:36811636..36812517 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTAGATATGAAGGCCGCGATTTGCATCGCTGCGGCAGTCTCACTGATCCACGTCGTGTCGGCTGCCGATTACACTATCGGCAGTGCAGCCGGCGGCTGGGGCGGGGAGTACAAGGCCTGGGTTGCATCGCAAACGTTTTCTCCTGGAGACACTCTAACATTCAAGTACAGCTCGTACCACAACGTCGTCGAAGTGACCAAAGACGACTACGAAGCGTGCTCCGCGACCAGCCCTGTCTCCGCCGACAGCAGCGGCAGCACCACCATCGTGCTCACGACGCCGGGGAAGCGCTATTTCATCTGCGGCGCGCCGGGGCACTGCCAGTCCGGAATGAAGCTGGTGGTGGACGTCGCCGACCGCCCCGCACCCGCAACGCCTAGCCCACCGCCGTTGCTGCCACCTTCTCCACGACACAAGAGGCGGACTGCACCGGCGCCAATGCCGTTGCCGCCAGCGCAAGCGCCAGTATGGTCGCCGGCACCAGCACCCGCGGCGACGCAGCGAAGGCATTCGGGGCACAAGAAGCACAGGAGCAGGCACCTTCCGCCTAAACCGGCGCCGGCGATGGCTCCCACTGTGCAGTCCGTGGAGGCAGATTTTCCGGCGGCGGCTTTCGCACCGATGTCCTCACCACCTCCCCCGCCGCCGATGTCGTCGGACGCTTCTGCCGTCGTGCGTCAAAAGTGGAGCGATGTCATAGTCGGCCTAGTAGCTCTTGGGCTAGTTGTTTTGGGTGTATGA</cdnaseq>

Protein Sequence

<aaseq>MVDMKAAICIAAAVSLIHVVSAADYTIGSAAGGWGGEYKAWVASQTFSPGDTLTFKYSSYHNVVEVTKDDYEACSATSPVSADSSGSTTIVLTTPGKRYFICGAPGHCQSGMKLVVDVADRPAPATPSPPPLLPPSPRHKRRTAPAPMPLPPAQAPVWSPAPAPAATQRRHSGHKKHRSRHLPPKPAPAMAPTVQSVEADFPAAAFAPMSSPPPPPPMSSDASAVVRQKWSDVIVGLVALGLVVLGV</aaseq>

Gene Sequence

<dnaseqindica>1..160#299..882#ATGGTAGATATGAAGGCCGCGATTTGCATCGCTGCGGCAGTCTCACTGATCCACGTCGTGTCGGCTGCCGATTACACTATCGGCAGTGCAGCCGGCGGCTGGGGCGGGGAGTACAAGGCCTGGGTTGCATCGCAAACGTTTTCTCCTGGAGACACTCTAAGTAAGTGTACTAAGCTGCACACAAATTACTGCAATTTTTACCAACTAGTGCGGTCATTAAGACTACAGTAGGATTGCTGTCGATTAATTTACGTACCGCGTTCTCCTGCTCATTCTTTGCGGGCAAAACACTGTGCAGCATTCAAGTACAGCTCGTACCACAACGTCGTCGAAGTGACCAAAGACGACTACGAAGCGTGCTCCGCGACCAGCCCTGTCTCCGCCGACAGCAGCGGCAGCACCACCATCGTGCTCACGACGCCGGGGAAGCGCTATTTCATCTGCGGCGCGCCGGGGCACTGCCAGTCCGGAATGAAGCTGGTGGTGGACGTCGCCGACCGCCCCGCACCCGCAACGCCTAGCCCACCGCCGTTGCTGCCACCTTCTCCACGACACAAGAGGCGGACTGCACCGGCGCCAATGCCGTTGCCGCCAGCGCAAGCGCCAGTATGGTCGCCGGCACCAGCACCCGCGGCGACGCAGCGAAGGCATTCGGGGCACAAGAAGCACAGGAGCAGGCACCTTCCGCCTAAACCGGCGCCGGCGATGGCTCCCACTGTGCAGTCCGTGGAGGCAGATTTTCCGGCGGCGGCTTTCGCACCGATGTCCTCACCACCTCCCCCGCCGCCGATGTCGTCGGACGCTTCTGCCGTCGTGCGTCAAAAGTGGAGCGATGTCATAGTCGGCCTAGTAGCTCTTGGGCTAGTTGTTTTGGGTGTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000682