Os08g0502400

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Revision as of 13:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0502400| Description = Beta-Ig-H3/fasciclin domain containing protein| Version = NM_001068703.1 GI:115477143 GeneID:4345960| Length = 1944 ...")
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Gene Name

Os08g0502400

Description

Beta-Ig-H3/fasciclin domain containing protein

Version

NM_001068703.1 GI:115477143 GeneID:4345960

Length

1944 bp

Definition

Oryza sativa Japonica Group Os08g0502400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24906386..24908329

Sequence Coding Region

24906574..24907398

Expression

GEO Profiles:Os08g0502400

Genome Context

<gbrowseImage1> name=NC_008401:24906386..24908329 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24906386..24908329 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggaatccaaagcagccatgatggtgaccatcctgctctgctgctcctccatctcaccggcgttcgcgcagaagcacaagggtccgcccgccgcggcggccgtgagcctcccgccgtcgccggcgccgtccccggcggcgccgcgccacgtggacctcgccgacctcctgagcgtggcgggtccgttccacacgttcctcgacctcctggagaagacggacgtgctcaggacgttccagagccaggcgaacggcagcaaggacgggatcacggtgttcgtccccaaggacgcggcgttcgcgtcgctggcgaggtcggcgacggcgaacctcacctccgaccagctcaagtcgctggcgctgtaccacgcgctgccgaggtactactccctcgccgagttcaacaggctgggcggcgcggccagcccggtgcccacgctcgccggcggcgagtacacggtcaacgtcaccgacgacatgggcaccgtccatgtcgggtcgatgtggtccaaccccaagatcagcagcagcgtctactccacccgccccgtcgccgtctacgaggtggacagggtgctcctcccgatgcagatcttcaggaccgacccgcccatggcgccgtcgccggcgccggcgccggacgccaagccggcctccgacgccgccagcccgctccccgggaagtcgtcgagcgccaaggcgaaggcggacgagaagaagagctcgtcgtcgccgccgtcgtcgcgccgcggcgccggcattgccggctacttcttggctcttgctgcatctgcctcagctggattgctgctcctgtgttga</cdnaseq>

Protein Sequence

<aaseq>MMESKAAMMVTILLCCSSISPAFAQKHKGPPAAAAVSLPPSPAP SPAAPRHVDLADLLSVAGPFHTFLDLLEKTDVLRTFQSQANGSKDGITVFVPKDAAFA SLARSATANLTSDQLKSLALYHALPRYYSLAEFNRLGGAASPVPTLAGGEYTVNVTDD MGTVHVGSMWSNPKISSSVYSTRPVAVYEVDRVLLPMQIFRTDPPMAPSPAPAPDAKP ASDAASPLPGKSSSAKAKADEKKSSSSPPSSRRGAGIAGYFLALAASASAGLLLLC</aaseq>

Gene Sequence

<dnaseqindica>932..1756#actctcctccattccttcactgccttcacttccctgctcagctcagcagctcaggtcagtctcctcagcattgtttcagctgcaatgccatgctcagaatctcttctcttaattttttggtttccatgagttccagtatgatgtttcatgggttggtcgtcttggaggcagccatttgtttagggcgcatttggatctgttcctcgcagttcttggcccgaggaaagaacagatctttgcgcctctcttgagcttggcgtctcttcttggtgctctgcgtttatgttccttcaggttgaagggaaatgctaatgcaaagcttagcacttaactgttcttggctcccaaattccagagatttggatgcttccagtggtgctgagatctgcaggatgtagtagtaggagtactgtttttgttcttgtgttagattatgtggtctcctgatttggttggtggcacctaacagttgaagtagtagtataatgcagttgtcaattcggactagatcgagtcttgaaagtgccccatcttgtgcatttgtctctcttggtgacagggaaagggccattaatttgtgctaaatttcagtaatctgaaaactctgctctaggagctagaaagatctgaacaataatgagcctggttaaaattctcaatgttcagaattaccacgaactgtagtaatctgaagcacaagaagttggttttctggcatttcagaatacagaacaacattacagatctcttgtatgttgatttgaacttaagtactctactaaatgtgttcagtaaacactgtagaattcacaagattaagagtaattctattcagcagttacagacttgtgctccagaaacgcatgacaaaaaaaattcagtgctgaatgcttcacttcactgttcttgcgtgacatcagggacttcgaggatgatggaatccaaagcagccatgatggtgaccatcctgctctgctgctcctccatctcaccggcgttcgcgcagaagcacaagggtccgcccgccgcggcggccgtgagcctcccgccgtcgccggcgccgtccccggcggcgccgcgccacgtggacctcgccgacctcctgagcgtggcgggtccgttccacacgttcctcgacctcctggagaagacggacgtgctcaggacgttccagagccaggcgaacggcagcaaggacgggatcacggtgttcgtccccaaggacgcggcgttcgcgtcgctggcgaggtcggcgacggcgaacctcacctccgaccagctcaagtcgctggcgctgtaccacgcgctgccgaggtactactccctcgccgagttcaacaggctgggcggcgcggccagcccggtgcccacgctcgccggcggcgagtacacggtcaacgtcaccgacgacatgggcaccgtccatgtcgggtcgatgtggtccaaccccaagatcagcagcagcgtctactccacccgccccgtcgccgtctacgaggtggacagggtgctcctcccgatgcagatcttcaggaccgacccgcccatggcgccgtcgccggcgccggcgccggacgccaagccggcctccgacgccgccagcccgctccccgggaagtcgtcgagcgccaaggcgaaggcggacgagaagaagagctcgtcgtcgccgccgtcgtcgcgccgcggcgccggcattgccggctacttcttggctcttgctgcatctgcctcagctggattgctgctcctgtgttgatgctaagaaacttttctaattcttttttttttttgcatggattgttggttgctggataattttattctttggacatagtaggggcattgtgttaggattaagttttatgggagtatttccgtcatatgcttgtatgattagtcgatgattacttgtttatccgatgcatgttgcgaattgcacaaggt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0502400, RefSeq:Os08g0502400