Os08g0502600

From RiceWiki
Revision as of 13:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0502600| Description = Calcium-binding EF-hand domain containing protein| Version = NM_001068704.1 GI:115477145 GeneID:4345961| Length = 57...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0502600

Description

Calcium-binding EF-hand domain containing protein

Version

NM_001068704.1 GI:115477145 GeneID:4345961

Length

576 bp

Definition

Oryza sativa Japonica Group Os08g0502600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24915224..24915799

Sequence Coding Region

24915286..24915693

Expression

GEO Profiles:Os08g0502600

Genome Context

<gbrowseImage1> name=NC_008401:24915224..24915799 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24915224..24915799 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgtggagatcgtggacgggagcacggtgcggagcttcgtggacgacgaggccgccttcaacgcgtcggtggacgggcgcttcgcggcgctggacgccgaccgcgacggcgtcctctcctacgccgacatgtccggggagctcatggcgctccgcgtgctggacacccacttcggcgtcgacgacggccacggcggcgccgacgacgggctctaccgcggcctcttcgcccgcttcgaccgcgacggcgacggcaaggtcggcctccacgagttccgcgccgagatgaaggaggtcatgctcgtcgtcgccaatggcctcggcttcctccccgtccagatggtcgtcgaggatggcagcttcctcaaggtggccgtcgacagggagctcgccaaggccgcctaa</cdnaseq>

Protein Sequence

<aaseq>MSVEIVDGSTVRSFVDDEAAFNASVDGRFAALDADRDGVLSYAD MSGELMALRVLDTHFGVDDGHGGADDGLYRGLFARFDRDGDGKVGLHEFRAEMKEVML VVANGLGFLPVQMVVEDGSFLKVAVDRELAKAA</aaseq>

Gene Sequence

<dnaseqindica>63..470#actcacacaacaaaccacccccaagatcaagaacaacaacaacaacaacaacatttgtcaagatgagcgtggagatcgtggacgggagcacggtgcggagcttcgtggacgacgaggccgccttcaacgcgtcggtggacgggcgcttcgcggcgctggacgccgaccgcgacggcgtcctctcctacgccgacatgtccggggagctcatggcgctccgcgtgctggacacccacttcggcgtcgacgacggccacggcggcgccgacgacgggctctaccgcggcctcttcgcccgcttcgaccgcgacggcgacggcaaggtcggcctccacgagttccgcgccgagatgaaggaggtcatgctcgtcgtcgccaatggcctcggcttcctccccgtccagatggtcgtcgaggatggcagcttcctcaaggtggccgtcgacagggagctcgccaaggccgcctaattcaataacctagctagctaattaaccacattgaactagcccacgacgattaatttgagtactttgtttggtaaattttattgaatttggtgttaatttggatttg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0502600, RefSeq:Os08g0502600