BGIOSGA000751

From RiceWiki
Revision as of 18:06, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA000751

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000751, complete gene.

LocusTag

OSJNBB0053G03.15

Ensembl Transcript ID

BGIOSGA000751-TA

Ensembl Protein ID

BGIOSGA000751-PA

Length

4591

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35653030..35657620

Sequence Coding Region

35657435..35657620,35656308..35656517,35655893..35656146,35655433..35655703,35655269..35655352
,35653574..35655189,35653255..35653471,35653030..35653155

Genome Context

<gbrowseImage1> name=IndicaChromosome01:35653030..35657620 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:35653030..35657620 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGCCCGCGGTCGGCAGGTGGGGTGGGAGGAGGAGGCGGAGGAGGAGGAGGAAGTGGTGGCGCAGCCGCGGGGGACGACGCGATCTGGAGTAAGCTCCGGGAGGCCGGCTTCGACGAGGAGTCCCTCAAGCGCCGCGACAAGGCGGCGCTCATTGCGTACATCTCGCGGCTCGAGTCCGAGATTTATCAATACCAACACAATCTTGGTCTTGTTTTGATGGAGCGGAAGGAGTTAACATCCAAGCATGAGCAACTTAGAGCTGCTTCGGAATCTGCTGAGATTATGCACAAGCGTGAACGTGCAGCCCAGCAGTCTGCTTTAGCTGAAGCAAGGAAGAAGGAAGAAAACCTGAAAAAGAGTTTAGGCATCCAAAAGGAGTGTGTTGCTAATCTTGAAAAAGCATTGCATGATATGCGTGGGGAAACAGCTGAAACAAAGGTTTCATATGAATCGAAATTGGCTGAAGCTCTTCAATTGATGGAGGCTGCACACAAGAAATTTGATGAGGCAGAAGAGAAGCTTCTTCTAGCAAAATCTTTGGAGGCAGAGTCCATACGGACTCATAATGCAGCACTGAGAAGTTTACATGACATCGATGATCGCGAAGATCAGCTTAGAAGAGACCGAATTTCTTGTGAGCTTGAGAATGAGGCCAAAGAGAAGGAAATTAGCCTCCAGAGGAAATCGTTGAACGATATGAAGAAAATTTTGCATGAAAAGGAGGAAGTATTACTAAAGGAACAAGCTCTACTCAATCAGAGGGACGAGAACATCCTTGAGAGATTAGCTTATGTTACTCACTCAGAGAAAAGAGTGGAAGAAGAAAAGAATATTCTTGAAGCTGAACGGAAGGTTTTGTTAGAGGAAAAATATAAGTTGGAGCTGAAAATGGAGGCAATAGTTTCAAGAGAGGAAGCTCTGATTCAGAAGGAATCCCTGCTTGACAAAAGGGAGAGTGAATTATTAATTTTGCAAGAGACAATCGCAAGTAAAGAACGGGCCGAGATTGAAAGGTTGAATCAGGAACAAGCTATAGCCTTGGAGAGGAGAAAACATGATTTTGAATCTGAGATGGCAAACAAACAAATGTCTTTTGATGCAGCAATGGAGGTGACAAGAAATGCGCTGCATCAGAGAGAATGTGCTCTCAGTGAGCAGGAATCTGTGGTTGTGCAAAGATCCCAGAATCTTGACCTTCAGCTAGCTGAATTAGCAAGCAAGGAAAAGGCGTTGGCAGGGAGATCAGATGAGTTGAAAGAGGAGGAGGAAAAGCTCTTGTTACACAGAGAAGCCATACACAATGAACTTCAAAAAGAAAGGGAAGAAATACAAAGGATTAAATCGGATTTGGAGAAGGAAAAGGCTTTCTTTGAAGAGGAGAAACGGGAAGCAATTCAAGCCCAACAAGATCTAGCAATAACACAAGCAGATAGAGATGAGTTGCTTACTCTGCAGATGAAACTTAAAGAAGAAATTGACAGCCTCAGAGCCCAAAAAAGGGAACTCATGGCTGATGCAGATAGGCTGCAAGCCGAAAAGGAAAGGTTTGAGATTGAATGGGAGCTGATTGATGAAAAGAAAGAGGAGCTACAAAAGGAAGCGATCAGAATTGCTGAAGAACGAAGAGCAATAACTGAGTATCTGAAGAATGAATCTGATATCATCAAACAGGAGAAGGATAATCTCCGTGTTCAGTTCAAAAGTAATTCAGAAACACTCTCTCGTGAACACAAAGAGTTCATGAGTAAGATGCAGCAAGAACATGCAAGTTGGCTGAGTAAGATTCAACAAGAAAGGCAAGATCTGAAGAGAGACATTGATATCCAGAGGGTGGAATTGCTAAATTCTGCTAAGGCAAGGCAGATGGAAATAGATTCTTATTTGAGGGAAAGGGAGGAAGAGTTTGAGCAGAAAAAGACCAAGGAACTCGAACACATCAATTCTCAGAAGGAGATGATCAACACAAAATTAGAACATGTTGCAGTTGAATTGCAGAAACTTGAGGATGAGAGAAAAGAAGCTACTTTGGAACGTGAGAGGAGAGAGCAAGAGTTGTCTGAGATAAAAGGCACTATTGAAGCCTTGAATAATCAACGGGAGAAGCTGCAAGAGCAAAGAAAACTATTACATTCAGACCGAGAAGCAATTACAGTGCAAATTCAACAACTTAATGTGTTGGAAGAACTGAAAATTGATTCTGAAAATAAGCAACTGTCTTTGTTACAACATGATAAGTCAAAGCTTGGAAGTGATATAAATGTGAAAGACAATCATCATGATAACTCCCATTCTTCACCAAAGCAACGTTTTGGAAGGAAACTAGACCTTTCTCCAGTCTCAACACCGATTTCTTGGGTTCGAAAATGTGCTCAGGTGATATTCAAACGGTCTCCAGAGAAGAGCGCTAGCCATGATCAATTTGCCCAGAATGGTGTGCCAAAGAAAGTTGGAGACTCTGTGGATGTTGAAGATGTGAATTTGGACTTTGCAAAAGTTGGTCAAAAGAGGCTTAATCATTTGGTTTCTTGTGACCAAACTGAAGTTTTAGAGCCAAAACGAAAGCACAGAAGGAGTACTATTCAGAAAGTTAATGGAGGGGAAATCACTTCCAACTGCCTGTCAGCTCTAGAAGAGAAATGCTCCAAGAATGAACATGATGAAGCCCCACTTGGTTTATCCAACACCTGCAAGGAACATGAATACGGCGATAAAGGGCCAGAGAACCTTACAAAACCAGGAGAACCAGCTTCATCTGTTGATGTGCCTTACGTGAACGGAATAGTGGATAATTCAGATTCTGTCCAAGAGGAACCTTCGGTGGAGGCTACAGTGTCTGCAACTGAAACATCTAATGTAGATGGACCTGAGGACAACAATGACTCTGACGAGGAAGATGAAGAGGAAGAGGAAGAGAAAACATCTTCAGCGAAGAAGCTGTGGCGTTTCCTCATAACTTGA</cdnaseq>

Protein Sequence

<aaseq>MASPRSAGGVGGGGGGGGGSGGAAAGDDAIWSKLREAGFDEESLKRRDKAALIAYISRLESEIYQYQHNLGLVLMERKELTSKHEQLRAASESAEIMHKRERAAQQSALAEARKKEENLKKSLGIQKECVANLEKALHDMRGETAETKVSYESKLAEALQLMEAAHKKFDEAEEKLLLAKSLEAESIRTHNAALRSLHDIDDREDQLRRDRISCELENEAKEKEISLQRKSLNDMKKILHEKEEVLLKEQALLNQRDENILERLAYVTHSEKRVEEEKNILEAERKVLLEEKYKLELKMEAIVSREEALIQKESLLDKRESELLILQETIASKERAEIERLNQEQAIALERRKHDFESEMANKQMSFDAAMEVTRNALHQRECALSEQESVVVQRSQNLDLQLAELASKEKALAGRSDELKEEEEKLLLHREAIHNELQKEREEIQRIKSDLEKEKAFFEEEKREAIQAQQDLAITQADRDELLTLQMKLKEEIDSLRAQKRELMADADRLQAEKERFEIEWELIDEKKEELQKEAIRIAEERRAITEYLKNESDIIKQEKDNLRVQFKSNSETLSREHKEFMSKMQQEHASWLSKIQQERQDLKRDIDIQRVELLNSAKARQMEIDSYLREREEEFEQKKTKELEHINSQKEMINTKLEHVAVELQKLEDERKEATLERERREQELSEIKGTIEALNNQREKLQEQRKLLHSDREAITVQIQQLNVLEELKIDSENKQLSLLQHDKSKLGSDINVKDNHHDNSHSSPKQRFGRKLDLSPVSTPISWVRKCAQVIFKRSPEKSASHDQFAQNGVPKKVGDSVDVEDVNLDFAKVGQKRLNHLVSCDQTEVLEPKRKHRRSTIQKVNGGEITSNCLSALEEKCSKNEHDEAPLGLSNTCKEHEYGDKGPENLTKPGEPASSVDVPYVNGIVDNSDSVQEEPSVEATVSATETSNVDGPEDNNDSDEEDEEEEEEKTSSAKKLWRFLIT</aaseq>

Gene Sequence

<dnaseqindica>1..186#1104..1313#1475..1728#1918..2188#2269..2352#2432..4047#4150..4366#4466..4591#ATGGCGAGCCCGCGGTCGGCAGGTGGGGTGGGAGGAGGAGGCGGAGGAGGAGGAGGAAGTGGTGGCGCAGCCGCGGGGGACGACGCGATCTGGAGTAAGCTCCGGGAGGCCGGCTTCGACGAGGAGTCCCTCAAGCGCCGCGACAAGGCGGCGCTCATTGCGTACATCTCGCGGCTCGAGTCCGAGGTACCCACCTCACTCTCTCTCTCCCCCCTCCTCCCCTCCTTGTGCGTGCTGGATGGCAAGGTTCTTGGATTTCTTGATTTGATGGTTTGACTCCCTCAGTAGCTAGTTCTTGGTGGAGGGTTTCCTCCTAGGAGAGGAGAAAGATTGATGGCCGAGAAGAATCGGCGGAACGTCGATGAAGTCTTCCTCTTGGAATCATTCGCTGCGTGGGTTCTTGTGTGACTAATGTCGAGTTTGGTGCGCTATGAGTTATCGGGAAAGAAGAAAAATCATTTTGGGATTTTGGTGGTTGCTCAGTTCTTTGTTTCTTAGGTACAGCTGACATGCTGGATGGGTTTATTAATGATTCAAGAAGCTTTTTTTTTTGCGTTGGTGTTTAGAATCGTTATCTTGGAATGTTTGTCATTTAGTTTAGCTTGCTTGGATTAGTTAGTGGCTGAACTGTAATTGTATAAGTTTGCTTCTTTTATTTTTTTTACATTTTTACATTCAACTTATTTATCTATTTCTTTCGCTTTGGGGTTTCTACTGTTGCAACTATACAGATGTATTCTGGGTTAACTTGTCTGGATTGAAATAGTAGATTGCTTTATGCATTGCGGTAGCATACGATTAATGTTGGAAGATGCCATGGCTATTATTACATTGGTATTTGCCGAAACCATTCATTGATCTGTATGCAATTTGTATCAATAGTAAAGTCTGCACATCAGTAAACCAGTTAGTCTATTATTTACTTCTTTCCTATTCACCATCGGATGTATGCCCAAATGTTAAATACCTACATTGTCATAAGCTATCATGTTTAGGACCTATTGCACATGTTGTAACTAAAGGCAAATTTACACGTTTTGCTCTGCAGAAGAATGGTAAATAAAATATCTGCTTTATCTTATTCTTTGCTTGTTTTGTTGTAGATTTATCAATACCAACACAATCTTGGTCTTGTTTTGATGGAGCGGAAGGAGTTAACATCCAAGCATGAGCAACTTAGAGCTGCTTCGGAATCTGCTGAGATTATGCACAAGCGTGAACGTGCAGCCCAGCAGTCTGCTTTAGCTGAAGCAAGGAAGAAGGAAGAAAACCTGAAAAAGAGTTTAGGCATCCAAAAGGAGTGTGTTGCTAATGTAAGTTTTTATCCCAAATAATAGCTCAGAAGCAAAATTTATTATTTATGTCTATGAGAACAAAAGAAAAATTCACTGTACATGAGACATTCTGAGATTTAATTTTTTTATCCAATTCATATATAATGATAATGTGGCCCTTATTCAATTTTTTCTGGTAGCTTGAAAAAGCATTGCATGATATGCGTGGGGAAACAGCTGAAACAAAGGTTTCATATGAATCGAAATTGGCTGAAGCTCTTCAATTGATGGAGGCTGCACACAAGAAATTTGATGAGGCAGAAGAGAAGCTTCTTCTAGCAAAATCTTTGGAGGCAGAGTCCATACGGACTCATAATGCAGCACTGAGAAGTTTACATGACATCGATGATCGCGAAGATCAGCTTAGAAGAGACCGAATTTCTTGTGAGCTTGAGTGAGTGTTCTATGTTCCACCTTTTCAATCAAATCGTCTTTCTTATATAGTATAGCTTAATTCAGTTCAGTAAATCACTGTCAAAATGCTTTTAATTTTTTTAGTCAACTGTGTACTTTGTAAGATATTCTTGCATAGTTTAGTGGGCATCTTTTATTCCTTTTCCCTAAATCAGGCATGCTAATGCAGGAATGAGGCCAAAGAGAAGGAAATTAGCCTCCAGAGGAAATCGTTGAACGATATGAAGAAAATTTTGCATGAAAAGGAGGAAGTATTACTAAAGGAACAAGCTCTACTCAATCAGAGGGACGAGAACATCCTTGAGAGATTAGCTTATGTTACTCACTCAGAGAAAAGAGTGGAAGAAGAAAAGAATATTCTTGAAGCTGAACGGAAGGTTTTGTTAGAGGAAAAATATAAGTTGGAGCTGAAAATGGAGGCAATAGTTTCAAGAGAGGAAGTATGTATATTTTTCTCCTTTTATTACCACCTATATATCATTGTGAAAGTTCTGTCTAACAAAATTGATCTCTTTTGCAGGCTCTGATTCAGAAGGAATCCCTGCTTGACAAAAGGGAGAGTGAATTATTAATTTTGCAAGAGACAATCGCAAGTAAAGAACGGGTAAGATTCTCCAATTTCACTATTGACAATGTGTGTTGTGACTTAACCTCTTGTAAATCATCTTGAATTTCTGCTGCAGGCCGAGATTGAAAGGTTGAATCAGGAACAAGCTATAGCCTTGGAGAGGAGAAAACATGATTTTGAATCTGAGATGGCAAACAAACAAATGTCTTTTGATGCAGCAATGGAGGTGACAAGAAATGCGCTGCATCAGAGAGAATGTGCTCTCAGTGAGCAGGAATCTGTGGTTGTGCAAAGATCCCAGAATCTTGACCTTCAGCTAGCTGAATTAGCAAGCAAGGAAAAGGCGTTGGCAGGGAGATCAGATGAGTTGAAAGAGGAGGAGGAAAAGCTCTTGTTACACAGAGAAGCCATACACAATGAACTTCAAAAAGAAAGGGAAGAAATACAAAGGATTAAATCGGATTTGGAGAAGGAAAAGGCTTTCTTTGAAGAGGAGAAACGGGAAGCAATTCAAGCCCAACAAGATCTAGCAATAACACAAGCAGATAGAGATGAGTTGCTTACTCTGCAGATGAAACTTAAAGAAGAAATTGACAGCCTCAGAGCCCAAAAAAGGGAACTCATGGCTGATGCAGATAGGCTGCAAGCCGAAAAGGAAAGGTTTGAGATTGAATGGGAGCTGATTGATGAAAAGAAAGAGGAGCTACAAAAGGAAGCGATCAGAATTGCTGAAGAACGAAGAGCAATAACTGAGTATCTGAAGAATGAATCTGATATCATCAAACAGGAGAAGGATAATCTCCGTGTTCAGTTCAAAAGTAATTCAGAAACACTCTCTCGTGAACACAAAGAGTTCATGAGTAAGATGCAGCAAGAACATGCAAGTTGGCTGAGTAAGATTCAACAAGAAAGGCAAGATCTGAAGAGAGACATTGATATCCAGAGGGTGGAATTGCTAAATTCTGCTAAGGCAAGGCAGATGGAAATAGATTCTTATTTGAGGGAAAGGGAGGAAGAGTTTGAGCAGAAAAAGACCAAGGAACTCGAACACATCAATTCTCAGAAGGAGATGATCAACACAAAATTAGAACATGTTGCAGTTGAATTGCAGAAACTTGAGGATGAGAGAAAAGAAGCTACTTTGGAACGTGAGAGGAGAGAGCAAGAGTTGTCTGAGATAAAAGGCACTATTGAAGCCTTGAATAATCAACGGGAGAAGCTGCAAGAGCAAAGAAAACTATTACATTCAGACCGAGAAGCAATTACAGTGCAAATTCAACAACTTAATGTGTTGGAAGAACTGAAAATTGATTCTGAAAATAAGCAACTGTCTTTGTTACAACATGATAAGTCAAAGCTTGGAAGTGATATAAATGTGAAAGACAATCATCATGATAACTCCCATTCTTCACCAAAGCAACGTTTTGGAAGGAAACTAGACCTTTCTCCAGTCTCAACACCGATTTCTTGGGTTCGAAAATGTGCTCAGGTGATATTCAAACGGTCTCCAGAGAAGAGCGCTAGCCATGATCAATTTGCCCAGAATGGTGTGCCAAAGAAAGTTGGAGACTCTGTGGATGTTGAAGATGTGAATTTGGACTTTGCAAAAGTTGGTCAAAAGAGGCTTAATCATTTGGTTTCTTGTGACCAAACTGAAGTTTTAGAGCCAAAACGAAAGCACAGAAGGAGTACTATTCAGAAAGTTAATGGAGGGGAAATCACTTCCAACTGGTATGATTTGTTTTTACACTACTATCTGAACTTTTGAAAGCAGCGTGACTATTTTAATTTAATGTTTCTTCATGCCCTTCACTAACAATCTGATATTGGCAGCCTGTCAGCTCTAGAAGAGAAATGCTCCAAGAATGAACATGATGAAGCCCCACTTGGTTTATCCAACACCTGCAAGGAACATGAATACGGCGATAAAGGGCCAGAGAACCTTACAAAACCAGGAGAACCAGCTTCATCTGTTGATGTGCCTTACGTGAACGGAATAGTGGATAATTCAGATTCTGTCCAAGAGGAACCTTCGGTGGAGGCTACAGTGGTAATTCCTCTTTCAGCTGCAGCTGCACTATTCTCATCATATGCTTTTAGTATGTGCCTTGGTCCATTGAACTTACTATATTCTGTTTTCGATTTGCAGTCTGCAACTGAAACATCTAATGTAGATGGACCTGAGGACAACAATGACTCTGACGAGGAAGATGAAGAGGAAGAGGAAGAGAAAACATCTTCAGCGAAGAAGCTGTGGCGTTTCCTCATAACTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000751