Os08g0502700

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Revision as of 13:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0502700| Description = Aminotransferase, class V family protein| Version = NM_001068705.1 GI:115477147 GeneID:4345962| Length = 2713 bp| D...")
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Gene Name

Os08g0502700

Description

Aminotransferase, class V family protein

Version

NM_001068705.1 GI:115477147 GeneID:4345962

Length

2713 bp

Definition

Oryza sativa Japonica Group Os08g0502700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24916148..24918860

Sequence Coding Region

24916430..24916567,24916660..24916870,24916964..24917330,24917426..24917710,24917914..24918121

Expression

GEO Profiles:Os08g0502700

Genome Context

<gbrowseImage1> name=NC_008401:24916148..24918860 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24916148..24918860 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggactacgtgtatgggccggggcggaaccacctgttcgtgcctgggccggtgaacatcccggaccaggtgatccgcgccatgagccgtcagaacgaggactaccgctcgccggcggtgcccgccctcaccaagaccctcctcgaggacgtcaagcagatcttcaagaccaccaccggcacccccttcctcttccccaccaccgggacgggggcgtgggagagcgcgctgacgaacacgctgtcgccgggggacaagatcgtgtcgttcctgatcgggcagttcagcctgctgtggatcgaccagcagcaacgcctcaacttcaacgtggacgtggtggagagcgactggggctacggcgccgacctcgccgccctcgactacaagctccgccaggacccctcccactccatcaaggccatctgcatcgtccacaacgagaccgccactggagtcaccaacgacctttccgccgtccgcaaaatcctcgacaagcacaggcacccggcgctactactggtggacggggtgtcatcgatatgtgcgttggacttccgcatggatgagtggggagtggacgtggcgctgacgggttcgcagaaggcgctctcgctgccgacgggtctgggcatcgtgtgcgcgagccccaaggcgctggaggcgagcaagacggccaagtcggtgcgggtcttcttcgactggaaggactacctcaagttctacaagatgggcacctactggccctacaccccatccatccagctcctctacggcctccgcaccgccctcgacctcatcttcgaggaaggcctcgagaacgtcatcaagaggcacaaccgcctcggcaccgccaccaggctggccgtggaggcgtgggggctcaagaactgcacgcagaaggaggagtggttcagcgacaccgtcaccgccgtcgtcgtgccgccgtacatcgacagcgccgagatcgtgaagcacgcctggaagcggtacaacctcagcctcggcctcggcctcaacaaggtcgccggcaaggtgttcaggatcggccacctcggccacctcaacgagctgcaattgatgggtgccctgagtggagtggagatggtgctcaaggacatcggctacccggtgaagctcggctccggcgtggcggcggcggcggcgtacctgtcgaattcgacgccgctcatcccgtccaggatctga</cdnaseq>

Protein Sequence

<aaseq>MADYVYGPGRNHLFVPGPVNIPDQVIRAMSRQNEDYRSPAVPAL TKTLLEDVKQIFKTTTGTPFLFPTTGTGAWESALTNTLSPGDKIVSFLIGQFSLLWID QQQRLNFNVDVVESDWGYGADLAALDYKLRQDPSHSIKAICIVHNETATGVTNDLSAV RKILDKHRHPALLLVDGVSSICALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPK ALEASKTAKSVRVFFDWKDYLKFYKMGTYWPYTPSIQLLYGLRTALDLIFEEGLENVI KRHNRLGTATRLAVEAWGLKNCTQKEEWFSDTVTAVVVPPYIDSAEIVKHAWKRYNLS LGLGLNKVAGKVFRIGHLGHLNELQLMGALSGVEMVLKDIGYPVKLGSGVAAAAAYLS NSTPLIPSRI</aaseq>

Gene Sequence

<dnaseqindica>2294..2431#1991..2201#1531..1897#1151..1435#740..947#ctccttcgcacgtattacgtgcgaaaaaaaaaatcatcagcacaagatcgaggaggctttatctgaacaaggtacacacatccatctccattagcgtcttctattagatcttcaatgatcgtaggtgtatgagtaaattcagtttagccatatggttggattttgtatgtgcaagaagaaattgaaacttagactaagttcagagaaattttgctttgttattgtctagagctagcaacttgaattttcaaaacagagagccagtagccgcatgaattgatttcttctggataagcacgagttaatctgccaagtaggatcagagcacgcactaatagtcgtttctttaattaaaaaaaaggaagaaaggactaatggtttccttggataagtgaaactgtccaaattgataacgtcttctgcgttattagtgacaactagtactagcaagtactcctgcctttgtttttctttcgagatagtagtgtactgttatgtctaactaaagccatgtattaattatatgtttgctatgttatatagtcggataattagagcaaaacaattaacaaaccgtatatagtacaactaagatagtaagatgagattatcactagtcatttttcaaagaacactttcagaaggttatattaggcaggagtttttattgctgtgggacgaataattattttttgtttgggcctgatgggcctttgtgtgtgtgtgtgtgggcagggagatggcggactacgtgtatgggccggggcggaaccacctgttcgtgcctgggccggtgaacatcccggaccaggtgatccgcgccatgagccgtcagaacgaggactaccgctcgccggcggtgcccgccctcaccaagaccctcctcgaggacgtcaagcagatcttcaagaccaccaccggcacccccttcctcttccccaccaccggtaacccaaccaacctacctacctagcttcatcgatcgaccacgtccatagctaagggttttaactggctaacccgcaaacccgcttacaggtcaataaatgggtttacggtttattttaatctataagtgggatcgtaggttaaccatttacaccttttatctatggtggcgcccgaagattgattgattgcttgcttgcagggacgggggcgtgggagagcgcgctgacgaacacgctgtcgccgggggacaagatcgtgtcgttcctgatcgggcagttcagcctgctgtggatcgaccagcagcaacgcctcaacttcaacgtggacgtggtggagagcgactggggctacggcgccgacctcgccgccctcgactacaagctccgccaggacccctcccactccatcaaggccatctgcatcgtccacaacgagaccgccactggagtcaccaacgacctttccgccgtccgcaaaatcctcggtaacatcttgagctttttatcactttcttgtcttctttctcttgatgaattactcatgctcatccatggcaacgatggacgacgatacgcgcagacaagcacaggcacccggcgctactactggtggacggggtgtcatcgatatgtgcgttggacttccgcatggatgagtggggagtggacgtggcgctgacgggttcgcagaaggcgctctcgctgccgacgggtctgggcatcgtgtgcgcgagccccaaggcgctggaggcgagcaagacggccaagtcggtgcgggtcttcttcgactggaaggactacctcaagttctacaagatgggcacctactggccctacaccccatccatccagctcctctacggcctccgcaccgccctcgacctcatcttcgaggaaggcctcgagaacgtcatcaagaggcacaaccgcctcggcaccgccaccaggtcggtcaccgaggaagaacattttgacgtttagaacaagattcggtcaaacttttgaacgtgagattctgacggcgtgatgtgcatatataggctggccgtggaggcgtgggggctcaagaactgcacgcagaaggaggagtggttcagcgacaccgtcaccgccgtcgtcgtgccgccgtacatcgacagcgccgagatcgtgaagcacgcctggaagcggtacaacctcagcctcggcctcggcctcaacaaggtcgccggcaaggtgttcaggatcggccacctcggccacctcaacgaggtcagtacacacacaactctgcagatcgatttgcagatgaaaattattgcagcaacatctgactcatctcattgatctccataactctgcagctgcaattgatgggtgccctgagtggagtggagatggtgctcaaggacatcggctacccggtgaagctcggctccggcgtggcggcggcggcggcgtacctgtcgaattcgacgccgctcatcccgtccaggatctgaagcacaacgaacgaaggaaggaaagcaattctcagcagcgatggttctgcctgcagtttggcagaacggaacagcggcaaattaatcctattgcatataatttggtctctgtatgtaaagttaaatttttatacgctccatcgatcagctctatgctaaggagtaaggagtataattttgtgaaggtactgcagcttttacttaattaatcttgaacctcgatgtatacaacagtgaacagttaaattaatcatcattccctaatgcctcttaattttaact</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0502700, RefSeq:Os08g0502700