Os08g0502800

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Revision as of 13:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0502800| Description = MDM2 oncoprotein family protein| Version = NM_001068706.1 GI:115477149 GeneID:4345963| Length = 4395 bp| Definition...")
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Gene Name

Os08g0502800

Description

MDM2 oncoprotein family protein

Version

NM_001068706.1 GI:115477149 GeneID:4345963

Length

4395 bp

Definition

Oryza sativa Japonica Group Os08g0502800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24925695..24930089

Sequence Coding Region

24925794..24926401,24927295..24927406,24927497..24927668,24927751..24927947,24929169..24929300

Expression

GEO Profiles:Os08g0502800

Genome Context

<gbrowseImage1> name=NC_008401:24925695..24930089 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24925695..24930089 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttgtccgaccaggagctggcccggtacgtggagtcgttcgtgcgccaggcggcggccgtcccgggcgccgtggcggcggcggggggcatatcggcggagtccgtggcgcgccagctcggcccccagctcggcctcgacctcacccccaaggcccccctcatccgcgacatcctcctcgccctcttctcccccccgccgcagggggcccccttcacctcctccgctccctccccctccgcctccgcctccgcctccgcctccgccgccgctgctggccacttcttctcccagcagcagcagcagcagcagctgcagacgttcctgacggcgtcgcagcagtaccagcaccgcggcggcgcgggggccgcggcggcgccaccgtcggcgtacggcgtcgcggcggcggcggcggggtacaggtacgggcagccgttcccgcaggacgaaggggcgcatctgcagaggctcgtccagatgcatcatcaccagcagcagcagcagcagcagcagcagcagcagatggcggcggcggcggcgggggtggccgctgcgccgcccacggctgtggagagcccgcgccccgcggcggcatcgaagaaagagagtgcaagtactggagtaaagagaagaggtggtccaggtgggctaaacaaagtctgtggtgtttctcctgagctgcaagctattgttggtgaaccaaccatggctagaactgagatcgttaagcagctttgggcatacattcgcaggaacaacttgcaggacccaaacaataagagaaagattatctgcaatgatgagctgcgtctagtctttgagacagatagcactgatatgttcaagatgaacaagcttttagctaagcatattagaccacttgaggcaaaaaaagattcaaatcgagattcaaagaagttgaagcctgtcgacagcgaacccatttctcctgctgaaactgatgttaaccagcttccaattatcttgtctgatgctcttgcgagcttttttgggactggagagaaagagatgccctcgtctgaggctgttaagcgtgtttgggaccacatcaaaagcaataatttagaggatccagcaaatcccaccatgatattgtgcgactcaaaacttaaacaactctttggatgtgaaagtctaactgccgtgagtgtttcggagttgctgtcacaacaccttttcaagcaacctaacaagctctaa</cdnaseq>

Protein Sequence

<aaseq>MLSDQELARYVESFVRQAAAVPGAVAAAGGISAESVARQLGPQL GLDLTPKAPLIRDILLALFSPPPQGAPFTSSAPSPSASASASASAAAAGHFFSQQQQQ QQLQTFLTASQQYQHRGGAGAAAAPPSAYGVAAAAAGYRYGQPFPQDEGAHLQRLVQM HHHQQQQQQQQQQQMAAAAAGVAAAPPTAVESPRPAAASKKESASTGVKRRGGPGGLN KVCGVSPELQAIVGEPTMARTEIVKQLWAYIRRNNLQDPNNKRKIICNDELRLVFETD STDMFKMNKLLAKHIRPLEAKKDSNRDSKKLKPVDSEPISPAETDVNQLPIILSDALA SFFGTGEKEMPSSEAVKRVWDHIKSNNLEDPANPTMILCDSKLKQLFGCESLTAVSVS ELLSQHLFKQPNKL</aaseq>

Gene Sequence

<dnaseqindica>100..707#1601..1712#1803..1974#2057..2253#3475..3606#acaaaaccacccacccaaaaaaaccaaccccctccgcgatccccatttcaaaataaccccgccgcctccgccgccgccgccgacgaggaggggtcaccgatgttgtccgaccaggagctggcccggtacgtggagtcgttcgtgcgccaggcggcggccgtcccgggcgccgtggcggcggcggggggcatatcggcggagtccgtggcgcgccagctcggcccccagctcggcctcgacctcacccccaaggcccccctcatccgcgacatcctcctcgccctcttctcccccccgccgcagggggcccccttcacctcctccgctccctccccctccgcctccgcctccgcctccgcctccgccgccgctgctggccacttcttctcccagcagcagcagcagcagcagctgcagacgttcctgacggcgtcgcagcagtaccagcaccgcggcggcgcgggggccgcggcggcgccaccgtcggcgtacggcgtcgcggcggcggcggcggggtacaggtacgggcagccgttcccgcaggacgaaggggcgcatctgcagaggctcgtccagatgcatcatcaccagcagcagcagcagcagcagcagcagcagcagatggcggcggcggcggcgggggtggccgctgcgccgcccacggctgtggagagcccgcgccccgcggcggcatcgaagaaagagaggtggtgcctcccacgctttgtttttcctcttcgatttcccataccttcgcttcgagttagggcttggattagatgttcttttaggttctcgctccgatttttcagatttggttggcgcattgaggttaggtcaagactaaaaacgctactactagttttttttttctctttaacgctcacaaagttcttgatgagtttaatctttattactactgtggatcgagatatttatcacgatgatttagtgggggtggggtaatctggaaggaactggtttccgagcgattcaattggtttgcctgcttgtactacatctttaatgtccacggacgcttgtggaatcacttctagtgtacttgagaaaatctttgaatactgccgtagggatgtcaaccataccagcataattaatgcctctgaacttgttggggggcaataatggatcccgtcattctcctcaaaatgattgccatgcaagcaacctcctttggcctagaaactaagaatcgtaacgataaagttcattgtgctaaacaaatggattttccatattatttcatctggaaactggaatttaacctccagatcatatttatcatgtttgtttactccacttgattaacttccaaatcatattatttgtgtttacttcatttagattgactttcaaaaaaggaacttctcttagatttgctatttggcatgtgcttgttcagacataatgtccaagaagcatcagtgtgtctttatggaagaatgttcctgatatgaaatccggtgtacagactatgagagagataaatgtgcccttatcttgctaaatgctagcatattttactgctcggtctattcattgaaccttttttttttccttggtcgtgtttacgaaccagtgcaagtactggagtaaagagaagaggtggtccaggtgggctaaacaaagtctgtggtgtttctcctgagctgcaagctattgttggtgaaccaaccatggctagaactgaggtttgttctgctggctcacctctctagtgaattatcttgtattaactattacatcatgtatgaaaccctgacgttgtgactcaactgcagatcgttaagcagctttgggcatacattcgcaggaacaacttgcaggacccaaacaataagagaaagattatctgcaatgatgagctgcgtctagtctttgagacagatagcactgatatgttcaagatgaacaagcttttagctaagcatattagaccacttgaggcaaaaagtaggtcttcttcactctccagctatgttctgcaaaataatcaagcttttgtttgtggaataagtgctcaaaattcttgcagaagattcaaatcgagattcaaagaagttgaagcctgtcgacagcgaacccatttctcctgctgaaactgatgttaaccagcttccaattatcttgtctgatgctcttgcgagcttttttgggactggagagaaagagatgccctcgtctgaggctgttaagcgtgtttgggaccacatcaaaagcaataatttagaggttagtgattattaccaaacttttgtgtattacatagttctcatcatctcatttgaatttgttgtgctataataaacttgtggtcatttcaaatgtccaagcatggagaactacaacaggcaatgcatatttcagttataaacgagtacctaaattgtgttttaggatcaaagcatatcaagttgatgtgaggtagttagaactaagaactacttactagggaacaaatgtaagtgctaagataaggataatagtgctctttaatttcgtatcaatgctgttatatgcctgtagatttttctgatctgtttcatgaactgaattttgtatactggatgcccttcttggtctattttgattttcttggcagatctctcactttctattctctcttttagtttttcttttgtttgttggttggtagaatggttgttggtggttgaacaactagatgcatatggtggttgtatcggatataagttgttgggtgtatattcccatgtgcttttcatttttgaactcagaactggtacatggtggtcaatataattttgtatagattatcataccttatataaaatccagtgtagccatttgcgaggatttcgcaagttgcttctgtgtgcaagttggtttattatatcttttgacctttgacaggagtgaagcataagcaaagcatgtcccatttaagtcactttcctccttactttagtgtcccattcatagctaaatactagtggtttgccacctaagaaggtaatgaatgataaatcatagcataagcaaaatctgagtatacgtattggctgctcttagtttgtggtctattttatccatcatgcaaaagaattcgccacttctagtttctccatattagtttgttttgctgttcatggagatggcccagtatggtagttattgaaaatctgcctgttggcatagctagatgaagacaagaggttgctgctaggcatttataggttggatttttcagtcatctggttagcaagagattttatattatccatccaggatttcattaacataaactataatgtataaattgcttttgcttatatttgtgacttctcttcctcactgaagccattttcaatgttctctgtaaagcacacaagagatccttgtatcttgctgttctagttcaattaaactactgcggattcagtcttatatctatcttgcttgattttgttgcaggatccagcaaatcccaccatgatattgtgcgactcaaaacttaaacaactctttggatgtgaaagtctaactgccgtgagtgtttcggagttgctgtcacaacaccttttcaagcaacctaacaagctctaactggttagttatttcctttcagaacaacatcatgtattgagacttgcactggttagtgtttgctagatgacatccatccctgcttgcaactcctagttagtataggaagatgttgaacaatatcagaattttttaaagtaactggatctgctccttccctgtttgttccttgcaccgagttcgcaccttaattttattataatggctcttaggtgctggaaactactcaatctatttcatctatagcaaggtgttatcttgcatatcttatatgttaaggcagaagttgatggtgttttgttttgttttgcagatgaatcgtcttactggactctagttggtctaacaccctggtagtaggcgctgatgaaacaacagaaaatgctgaaagtgtttattctatgctttgtatccatcaaactgatttacttatgagaaaaaggctgtaggctaatctcttcacagtagcaaggaaaaagaatgatagttgttgcatattatgtagtcttgagtcttcttggaagagtcacatgtggtaggctatcttgaatttctagcttgttaaatactgagtagaaagcagcaccgaagcaaagttaaagctgatgaactttgcttgatgtaaaaatcagcaagcataggtgcgttctatggtaagtagttgctttcacctttgttgcttgaaagcctcttacattgttagtgctcttgttaaaaggacacctgtgctctccctgtattatgttgtcggtgatgcttaatttaaatttacagttttagattgtcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0502800, RefSeq:Os08g0502800