BGIOSGA000805

From RiceWiki
Revision as of 18:06, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA000805

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000805, complete gene.

LocusTag

OsI_03781

Ensembl Transcript ID

BGIOSGA000805-TA

Ensembl Protein ID

BGIOSGA000805-PA

Length

6649

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34898009..34904657

Sequence Coding Region

34904616..34904657,34903532..34903607,34903145..34903265,34902881..34903066,34902554..34902766
,34901967..34902470,34901537..34901719,34901316..34901447,34900680..34900859
,34900402..34900573,34899564..34899623,34899031..34899189,34898193..34898255
,34898009..34898032

Genome Context

<gbrowseImage1> name=IndicaChromosome01:34898009..34904657 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:34898009..34904657 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATATCTCACAAGGTTGTGCCTGGGCTCCAGCTTCAACACCCCAAGCTTGTTGGTACCATGGATGAATCACGAAAAAGAGCCGCATCTACTGCAAATGCTAAAAGTTCATCCCTTGGTGAAGATTTTGGCAATGATTTTCTTTATTCTTGGAAATTACCAAAATCAGGAAATGACACGATTGACTTTGACGTTGAGTCAGTTCCGAAGAATAGCAAGAAATTCAGCTTTGACAACCTGGATGATTTTGGGCTTGATGGAGCCTTCGACAAATTGTCGTCATTTAAAATGGGCATGTCTGATCTAGATTTCTCTGGTCCTCTCAAGAAAAAGGTGAAGCCCAACAACTCAAATGGCAACGATCTTTCTGAAGGGATAAAAGGGACTGAAAAGGACAACTTCTCCTTTTCCTTTGATTTCAATGAGCTGGGCAAGTTCAATCTTGATGCTAACTTGGGAATTGAGGAGAATGGTATGAGTAAATTTGTAGAAAAGGTCAACCCTGTCTCTTCAGAGGGTGACAAGGATCCAAGAAAAGGTCTTTCAGTTAAGGGCTCTGATGTTCTGGGAGGTAACATTAGTAAGGAACAAAAGCAAACACATGATGCTTGTACTCTGAGGCCTACTCATTTGAGAAGCTTTAGCCCTGCAAGAATGGACCAAAATAAAGTAGATTTGCTCTCAACTGATACACATGAAGAGAAATCTAATGAGACACACCCATCAAGAGCAGCTGTTAACAAGCCTTCTCAGAATCTTCCTTGCAGTTCTACACCTGGTGAAGATCCTACACACGTGACTACAACAGCAGTTGCTGAGAACTGTAGAGAAGCTCCTTTGGTGGAACTTAGTAAAGTTCATATATCAAGGGGGAATAATGATAGTGGGCAATCAGTTAGTTCACAATTCATGAACACCAGCACCACGTGCCCCTCCATCTCAAGAAAATTGACGGCCCAATCAGATTCCCAAAATGACCAGAATGAGATTGTGGGGGAAAGTGCATGTCTTAATGCACAAAGTCCTGATAACCAAAGGTTTAGAGGAACTTCAATGAAGCTTCTGAAGAAAACATCATGTGAAACAAAGAAGGCTGAAAAGGGGACTTCAGGTCCAAAGAGTCTCTCTTCATCAATGCAGAGGGATATGAGAAATGTCAAACCCGCATCATTGAATGAAGCAGGGAGTTTGTCTCTTCCGCCCCAGTCTTCAATTGTTAAAGCAAGCAGGCCTCCTCAACTAACTTCTGAAACAACCTTAAATCAATTAAGTAGTGCCAATAACATGGTAAAAAAGATGAATACACATTCTACTGAGTTGAAAAGGGAAAGCACACAAGCTAATGCAAGATCTGAAAGGCCTAAAATTGCTTCGTCAAAAACATTCTGCAAGCCAGCATTACATGAGCTGTTGACCACCTCCATGAATGCCAAAGATCATAAGAATTCCAAACTTAGACTTGAGTCTCCTAGCACAGGCAATGTTTCTACACTGAATGCTCCTAGCAGCCCAGCACATAGCAATGGACATAAGACCGTTGCGAGTCGGTCACTCTTGGGAAGTACCAATGTTTTTGATGCAGGAAAAGGCACTCCTAAAGCTGACAATAGACCACTTTCTCAACTGAAAGCAGCAAAAATTACTAAAGCAGGCACCATAAGTTCAAAGTCTGACTTGCTTCTGGAGAAGGATATGATGGAAACGAGCGGGAGGAAGGGTTCCCCTGTAACAACATCCAATAACCCAAAGTCCTATGGTGAAGGAAAATATGTGTTGCCTAGCCCATCCATGATGCAAAAGACTCCTAAGGAATCAGCTTCAGATCCAAAAGCTCCTGCTATGCTGAAGCACATCATGAAATCTCCAGCTATTCCAGGAGGTGGAACTCCAAAAGCATGCATGGATAATGCCATTGCTTCAGCAATATCATGTGAGATGGGGGAAATTTCTGAACTAGAGTTGCCTGCGCTGTTAGAAAATGATGTAAATGTACAAAAAGCTGAGGCTTGTAGAAAGGAGCTTGAAGATAAATTTGCTAGCAATCTGAGATCCAAGAAGGTTTTATTCGAGGATATTAGTGCCATTGATGCTAGAGAGTTTTCAGATGGCAATTGA</cdnaseq>

Protein Sequence

<aaseq>MISHKVVPGLQLQHPKLVGTMDESRKRAASTANAKSSSLGEDFGNDFLYSWKLPKSGNDTIDFDVESVPKNSKKFSFDNLDDFGLDGAFDKLSSFKMGMSDLDFSGPLKKKVKPNNSNGNDLSEGIKGTEKDNFSFSFDFNELGKFNLDANLGIEENGMSKFVEKVNPVSSEGDKDPRKGLSVKGSDVLGGNISKEQKQTHDACTLRPTHLRSFSPARMDQNKVDLLSTDTHEEKSNETHPSRAAVNKPSQNLPCSSTPGEDPTHVTTTAVAENCREAPLVELSKVHISRGNNDSGQSVSSQFMNTSTTCPSISRKLTAQSDSQNDQNEIVGESACLNAQSPDNQRFRGTSMKLLKKTSCETKKAEKGTSGPKSLSSSMQRDMRNVKPASLNEAGSLSLPPQSSIVKASRPPQLTSETTLNQLSSANNMVKKMNTHSTELKRESTQANARSERPKIASSKTFCKPALHELLTTSMNAKDHKNSKLRLESPSTGNVSTLNAPSSPAHSNGHKTVASRSLLGSTNVFDAGKGTPKADNRPLSQLKAAKITKAGTISSKSDLLLEKDMMETSGRKGSPVTTSNNPKSYGEGKYVLPSPSMMQKTPKESASDPKAPAMLKHIMKSPAIPGGGTPKACMDNAIASAISCEMGEISELELPALLENDVNVQKAEACRKELEDKFASNLRSKKVLFEDISAIDAREFSDGN</aaseq>

Gene Sequence

<dnaseqindica>1..42#1051..1126#1393..1513#1592..1777#1892..2104#2188..2691#2939..3121#3211..3342#3799..3978#4085..4256#5035..5094#5469..5627#6403..6465#6626..6649#ATGATATCTCACAAGGTTGTGCCTGGGCTCCAGCTTCAACACGTGTGTCAATACAGTATGACCGTTCGCTGAATCGTGCTACTGCTTAATAGGGCATTGCCCAAACATATCTATTTATCCACCATTTCAACCCTATAAAATAATAAAAATAAAATTCACCGTCTTAAAAATTCAGCTCAGAAGTTCCGTTTGAAAAATGGGATTATTTCCATTTTTTAAATTTCACCGTTTGGTAGTGTGGGGATGGGATGTGCAATCCGGGTGGCGGAATTACTAAATTACCTTCGCCATTTTGACGTGTAGTTGGCCTCTGTCGTCAGTTTGCCCGCCGCCGCCGCCGCCTCCGCCTCCGCTGACCGCGAGCGAGCAGGGCGCCGTCGTTCGTCCTGTTGCTTCCGCGGTTCCGCCGCATCCTGGTGAGTACATCCTCCGCCACCGCCGTCTGCGCCGATCCCCATCCATCGCGCGAGCGAGCGAGCAGGGTCGTCGTCGTTCGTCCTGCTGCTTCCGCCGCATCCGTTATGCACATCCTCTTTCCCATCTCCCTCTACCCACGCACTTTTTTTCTCGAATTTGCGTTAACCCTAGCTTCTGTTCTAGAAATTTGCTTTAACCTTAATACTCATAACAGTTTGTTTGTTCCCCAAAAGTTTGGGGGTTTAACTGAACCACGATGTCCCATGTTAGATCCGCCACTGCATGCAGACACCTTCCCTGATGTTTCTCTGAGAAACTAACCCCCCCCCCCCTCCCTCCCTTCCCTCTGTTCTCCAGAGCTACATAGTGTTATCTGAATAGAAGTATTGTTCTAGAGAGAAGAAGGTTTTATTGAAAATTTGATCATCTATAATTCATATTGTTCTAGAATTCATCTGTGATTTGTCAAGTTTTAAGTGACGTGTAGGTGGATATAGTTTCATCAACATGTACAATTTTTTTTTGGACGTTCTGCATGTATCTAACGATCATATAACTACCAAATTGAATCTATAGTCACACTTCTGTTTTGTGTTATTAGTGGTTACTTATATCCTTTCCTATTGCATGCAGCCCAAGCTTGTTGGTACCATGGATGAATCACGAAAAAGAGCCGCATCTACTGCAAATGCTAAAAGTTCATCCCTTGGTATGATACAATAGAGCATCATATGCCTTGTTGCTTTTATGTTGCACCTTAATCAAATTTATCTGATTCATGTAAGATGAATACTCCTGGTATGTAACTGTTTTTGAATCAAGTTCATTGTACTTACATATGACTGCCTGCAGGAAATTACATATGTTGCTCATGAAATGCATATATTTTTTTAATTTTGTGCAGTAGGGTAGGAAATATTTCTTCCTTTTCCATCGTAACAACTTGAAATGGTGAATGCTTTTTAATGTCCGCAGGTGAAGATTTTGGCAATGATTTTCTTTATTCTTGGAAATTACCAAAATCAGGAAATGACACGATTGACTTTGACGTTGAGTCAGTTCCGAAGAATAGCAAGAAATTCAGCTTTGACAACCTGTGAGTATTAGGCTTGAAAGTTTCCTTTAGCATATGATGCCGCAGTAATTGGGAATGACAGTATGTTTCTTTTATCAGGGATGATTTTGGGCTTGATGGAGCCTTCGACAAATTGTCGTCATTTAAAATGGGCATGTCTGATCTAGATTTCTCTGGTCCTCTCAAGAAAAAGGTGAAGCCCAACAACTCAAATGGCAACGATCTTTCTGAAGGGATAAAAGGGACTGAAAAGGACAACTTCTCCTTTTCCTTTGATTTCAATGAGTAAGTTTTTCAGTGAATAATTTTAGTGAGTAAGTTATATTGGTGAAGACCAATAAATATGACACAAAATCATGAATTTAGTTGCTTCATTTTCTTTGTTTTGTTTACTTGAAGGCTGGGCAAGTTCAATCTTGATGCTAACTTGGGAATTGAGGAGAATGGTATGAGTAAATTTGTAGAAAAGGTCAACCCTGTCTCTTCAGAGGGTGACAAGGATCCAAGAAAAGGTCTTTCAGTTAAGGGCTCTGATGTTCTGGGAGGTAACATTAGTAAGGAACAAAAGCAAACACATGATGCTTGTACTCTGAGGCCTACTCATTTGAGAAGGTAGGGTAATGTAAAGAACGATAACTGTGCAGCTTCAAACATTATTCCTCTAACTCATTTGACAGTATGCATGATTTTCTCAGCTTTAGCCCTGCAAGAATGGACCAAAATAAAGTAGATTTGCTCTCAACTGATACACATGAAGAGAAATCTAATGAGACACACCCATCAAGAGCAGCTGTTAACAAGCCTTCTCAGAATCTTCCTTGCAGTTCTACACCTGGTGAAGATCCTACACACGTGACTACAACAGCAGTTGCTGAGAACTGTAGAGAAGCTCCTTTGGTGGAACTTAGTAAAGTTCATATATCAAGGGGGAATAATGATAGTGGGCAATCAGTTAGTTCACAATTCATGAACACCAGCACCACGTGCCCCTCCATCTCAAGAAAATTGACGGCCCAATCAGATTCCCAAAATGACCAGAATGAGATTGTGGGGGAAAGTGCATGTCTTAATGCACAAAGTCCTGATAACCAAAGGTTTAGAGGAACTTCAATGAAGCTTCTGAAGAAAACATCATGTGAAACAAAGAAGGCTGAAAAGGGGACTTCAGGTCCAAAGAGTCTCTCTTCATCAATGCAGAGGTTTGTCTTTGCTATAAGTTTCTTTATTAACAACATAAGACCTTTATTCTTCCATTCAGTGCTTACCCAGTGATTATTTTCATTAACAGATAATGTATCTTAAATCAGATATCAGTAATGTAGGATTAAGTGTAGCATATCATAATTCTGCTTGTACAAGGGAGTTCTTTTCCTTTATGTGAGCCGAGATGTAATTTTGTACAGTGATTTGTTACCATGTGACACTATTATGATAAATATCATGCAGGGATATGAGAAATGTCAAACCCGCATCATTGAATGAAGCAGGGAGTTTGTCTCTTCCGCCCCAGTCTTCAATTGTTAAAGCAAGCAGGCCTCCTCAACTAACTTCTGAAACAACCTTAAATCAATTAAGTAGTGCCAATAACATGGTAAAAAAGATGAATACACATTCTACTGAGTTGAAAAGGTAGTAGGCTGTAGACAGATTGATGGCTAGCATGTACTCATAAAATGTTAATACTGTATCAAATAATGAATGTGCTTTATAAAATGCAGGGAAAGCACACAAGCTAATGCAAGATCTGAAAGGCCTAAAATTGCTTCGTCAAAAACATTCTGCAAGCCAGCATTACATGAGCTGTTGACCACCTCCATGAATGCCAAAGATCATAAGAATTCCAAACTTAGGTAAGAAACTGCTGCCCTTCAACCTTGCAACATCAGGAATGTGTCGGTTCAAAAACTTTATTCTAATGGTGTTTACTTAATGTATGCACAATACTGCTATGTTTTCTTCATAATTCTGATCTAACATTTTAACATGGACATGATAGTTCCTTGATAATTTTTGTGTCCCGTCTAGTATAAACTTGAGTAAAATCAATTCACAAGAAACCCACTATAAAGGTTTGGTGTGTTTGTTAGCGTGTTTCATGGAAACTGTAAATACCTCACATACTTTTAGTATGTTTTCATGGTGGATGTGTTTACACTTGGAATAGGTGTATTGAATAGAATGGATGCGCACTGCATCCATTCTACTTGTTTTCTTGTTTCCAGTACAGCAGAATGCTCTATATTTACCGTATTTTATCCCCTTGATCCTTCCACTGCATTGATGGTTAACAAGCTTCCTTTTCCCAGACTTGAGTCTCCTAGCACAGGCAATGTTTCTACACTGAATGCTCCTAGCAGCCCAGCACATAGCAATGGACATAAGACCGTTGCGAGTCGGTCACTCTTGGGAAGTACCAATGTTTTTGATGCAGGAAAAGGCACTCCTAAAGCTGACAATAGACCACTTTCTCAACTGAAAGCAGCAAAGTATAGTATCTCTACCATATTGCATAAATTAGGAATTTGAACTATTAACTGTGTTTTTCTAAACATATTGCATAAGAAGTGACTGAAATCATCTATATGAATGTAGAATTACTAAAGCAGGCACCATAAGTTCAAAGTCTGACTTGCTTCTGGAGAAGGATATGATGGAAACGAGCGGGAGGAAGGGTTCCCCTGTAACAACATCCAATAACCCAAAGTCCTATGGTGAAGGAAAATATGTGTTGCCTAGCCCATCCATGATGCAAAAGACTCCTAAGGTTATTCACTGGTGCAACATTATGTTTTAAAAAATCATTTCCTTTTTCTCCTATTGCTTGTATCCCTGTGTGGTTTAACCCTCATTGTCTTCATCTGAGGATTGCAACTAATACTTTTTCTTAAGCTTACATTTTTCAGACTCAAAAATTTGATTTGTCAATTCATATCAAGTTTGTTGTTTGTAACTTTGTATGTGCTTATTTCATATCAAAGTTTGTGAGGAATGTTATGCCCTTCCACGGCATAAAAATTCACCCTGGATATACCAAGTGTTAAAAAGTACATGCAGAAGACGATATCCACTCATGGTAAGAGTGGTAGACCATATGTAATAGCTCAAATTCCTAATTTATGAAATTCCATGTCATACTGAAGAAATCCATCATGCCCTTATAGAAAATTTCTATGACGTCTACTGACTTCTGTCATCAACTAATCTATCAAGTTAACAGACGTGTTAAAATTGTCCAATCCTAAAAGCATGAAGCATTAATCCACAGATGTAACATTTAAGTTGTACTGTTTTGAGTCAGTGATTATATTACGGGTGGTAGTTTTTTACTTGTTCATCTTTAAGCACAGTTTCACAGGGTTTTAATGGACTGATTTGATAAATGAAATATCCTGCAAAAGTCAGTTTTTAAGCAAGGTTTTTATCTGCAGCAAATTTACTAAGCTATTGATAAAAGAATACAATTTTTTATGTACATTTTTTTAGGAGAATTCGCTATTGTTAGTTTTTTGTAGTTTGTTCATATTGTTAATTTGCCTTCTCAGGAATCAGCTTCAGATCCAAAAGCTCCTGCTATGCTGAAGCACATCATGAAATCTCCAGCTGTGAGGTTGTTGTTTCGATTGCATTTTAATGCATAAAAATGTATCTTGAATATTCTAGTTCTCTCTTTTGGAAGTAATAGATTTATTTTACCATGCAGAACATCACCAGAAACTGTTTCAGAGTTGGGAAATAAAACAGTAAGTGCCATGAATATATCTGATTACTGCATATATTTTGTTTCGCCATAACTGAATTTATGAAGGCTGATGTGTTATGCAGTCAACCATTCTATAAGTTATCTAAATCAGAAACAAAAACAATGTCAATGGTTATGCTTCACCTTGAGACCATGGAAAGATGAAATGACTTGCCATTGAAACCAGGTTGTATCGAGCTGTTCTCATATCCTTACTTTCTTGATTTCACTTATTAGATTCCAGGAGGTGGAACTCCAAAAGCATGCATGGATAATGCCATTGCTTCAGCAATATCATGTGAGATGGGGGAAATTTCTGAACTAGAGTTGCCTGCGCTGTTAGAAAATGATGTAAATGTACAAAAAGCTGAGGCTTGTAGAAAGGAGCTTGAAGATGTGAGTAAATCTGTCCAATGCTTTATTATCCTTATTTGAATGTTCGCACCGTAATGCAGCGATTATTCTGCAGAAAGGAAAAAAAGAGGTGGGGCTGCATGGTGCTCATATTAGACTTGATGAAATCTGATGGCACTAGCTTGAATCCAATTCTTATAGTTCCTTATAGTTTTGTCAAAGTAGCACTTCACAGCTATGCCATCTAAATCAAGTGGCAATATATATGGGCAGATTGTGTCTTATTGTTGTCAACATGATTCTCTTTAAGTTTGCTCAGAGGCTTATGCACCTTTTAACTGATATATGCGTAATTCAAATTTGGATTTTGGATCACTTAAGTTTTTCACACAAACCTATGAAATAATGTTTTACTGTTGTAGCCAGAACTCTTTAGATGTAATTTCCTGGTCTGGAGCGGCTGCCTTTTATTTTATTTTCCTTTAGCTGACCTGTTTTTTTTACCATAATGCTGATATACAGATGTCATCATGTAGGCAGTCTAAATTAAGTCACCACCTGATGGCATGAGAAATATTCTAACTTGCTTGTCTTACTCTGCAGTTATGCATTTCGTTGAAAAGGAAACATGAAGAAGCCAAAGAGCTAGCAGTGCGGGCTATTGTTAACAACAATGCAATGCTGATGTTAAACCATCCAATGTTTGAGGATAAAATATCCTACTGCTTATTTTTTTAGCAGTTAATCACTGCACTTTCACATTTATTAATATTAAACTTTTTATTCCTTAACCATAATTAACATTTGTGCTCTTCAGAAATTTGCTAGCAATCTGAGATCCAAGAAGGTTTTATTCGAGGATATTAGTGCCATTGATGCTGTAAGTTATCAATCTCATCCCATTTCTCGATCTCTGTGACTGACCTTAACATAATTATTCCCACATGAAGATAAAAGAGGAAGTGATATTTTCTAAATTAACTGTGTTGAAAATCCTATTAGTAAAACCTACTATGATTTGCATTAGTTATTTACTGTAGAGAGAGTTTTCAGATGGCAATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000805