Os08g0503800

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Revision as of 13:07, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0503800| Description = Similar to Beta-(1,2)-xylosyltransferase (EC 2.4.2.38)| Version = NM_001068712.1 GI:115477161 GeneID:4345969| Length...")
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Gene Name

Os08g0503800

Description

Similar to Beta-(1,2)-xylosyltransferase (EC 2.4.2.38)

Version

NM_001068712.1 GI:115477161 GeneID:4345969

Length

4104 bp

Definition

Oryza sativa Japonica Group Os08g0503800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24975778..24979881

Sequence Coding Region

24975871..24976602,24977800..24977949,24978752..24979471

Expression

GEO Profiles:Os08g0503800

Genome Context

<gbrowseImage1> name=NC_008401:24975778..24979881 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:24975778..24979881 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgcctgtacgcacgtaccaccaccaccaccaccacaacaacagcaacaaccatcggctacgccgcatcatcccccgagtcctcctcgccgtcttcgccatctacgccgtctcgttcgcggcgtacctcctccgccaccagtcgccgcacccgcacccgcaccctgccgctgaccccgagcgcgacgccgtggacgcagccggaggaggcggaggaggaggagccgtggaccgtgtgcgggtagaagcgccgtcctcgcagaagccatggcctcgcctcccctccttcctcccgtggacgtccgcctccgttcggccgccgccgaagcactcctgtgaggggtacttcgggaacgggttctcccgcctcgtggacgtgctccccgcgcggggcggcggcggcggcgggtggttccggtgccaccacagcgagacgctgcgcagctcgatctgcgagggcgggagggtgcggctcgacccggggctcatcgcgatgtcgcgcggcggcgagccgctcgaccaggtgatgggccgcgccgaggaggaggagctgcccaagtacgagcccggcgcgctgcaggtggaggcggcggcgaagaggacggggccgttggtggaagcggggttcctcgacgcctacgtgcccaccggcgggatcgggatgcacacgatgaggtcgctgctcgactcggggcgcgtcgtgccgcccggcgagctacactgctcgcagtgggttgaagaaccaacacttctagtaactcgttttgaatatgcaaaccttttccacacaattacggactggtacagtgcatatgtcagttccagagtcacggatttacctaaccgccctaatgtggtctttgtggatggacattgcaaggcacaactggagcaaacatgggaagcacttttctcaaatgtgacatatgttaagaatttctctggccctgtttgttttcgacatgcaattctttcaccattgggctatgagactgcgctatttaagggccttagtgagagctttagctgcgaaggtgcttctgcggagtccctcagagaaaagcctgatcaccagaaaacggcaaggttgtctgaatttggtgagatgattttagcttcttttgatcttctgagggatgacatactgtcatccaaaacatcaaatgggctcaatgttctctttgttcggcgagaggactacttggcccatccacgccacagtggaaaggttgaatctagactaagcaatgagaaggaggtatatgatgcaattgagggctgggcaaaaggtcagaaatgcaaaataaatgtcatcaatggtctttttgcccacatgaacatgaaggagcaactgcgtgctatacaggaagcttcagtagtaataggggcacatggggctggtctaactcacttggtttcagctaccccagatacaaaagtccttgaaatcatcagcagcatgtatcgacgcccacattttgcattgatctcacactggaagagcttagagtatcatgccataaatctccctggatcatatgcaagggtaacagatgttatcaatgagttgagtaatatactgaaaggttttggatgctga</cdnaseq>

Protein Sequence

<aaseq>MMPVRTYHHHHHHNNSNNHRLRRIIPRVLLAVFAIYAVSFAAYL LRHQSPHPHPHPAADPERDAVDAAGGGGGGGAVDRVRVEAPSSQKPWPRLPSFLPWTS ASVRPPPKHSCEGYFGNGFSRLVDVLPARGGGGGGWFRCHHSETLRSSICEGGRVRLD PGLIAMSRGGEPLDQVMGRAEEEELPKYEPGALQVEAAAKRTGPLVEAGFLDAYVPTG GIGMHTMRSLLDSGRVVPPGELHCSQWVEEPTLLVTRFEYANLFHTITDWYSAYVSSR VTDLPNRPNVVFVDGHCKAQLEQTWEALFSNVTYVKNFSGPVCFRHAILSPLGYETAL FKGLSESFSCEGASAESLREKPDHQKTARLSEFGEMILASFDLLRDDILSSKTSNGLN VLFVRREDYLAHPRHSGKVESRLSNEKEVYDAIEGWAKGQKCKINVINGLFAHMNMKE QLRAIQEASVVIGAHGAGLTHLVSATPDTKVLEIISSMYRRPHFALISHWKSLEYHAI NLPGSYARVTDVINELSNILKGFGC</aaseq>

Gene Sequence

<dnaseqindica>94..825#2023..2172#2975..3694#gaccgcttccgagatccgttcaaccccgatctacgccgccgagaacctcgccggcggcgacgacgacgagcacctcgccggcggcggaaggcgatgatgcctgtacgcacgtaccaccaccaccaccaccacaacaacagcaacaaccatcggctacgccgcatcatcccccgagtcctcctcgccgtcttcgccatctacgccgtctcgttcgcggcgtacctcctccgccaccagtcgccgcacccgcacccgcaccctgccgctgaccccgagcgcgacgccgtggacgcagccggaggaggcggaggaggaggagccgtggaccgtgtgcgggtagaagcgccgtcctcgcagaagccatggcctcgcctcccctccttcctcccgtggacgtccgcctccgttcggccgccgccgaagcactcctgtgaggggtacttcgggaacgggttctcccgcctcgtggacgtgctccccgcgcggggcggcggcggcggcgggtggttccggtgccaccacagcgagacgctgcgcagctcgatctgcgagggcgggagggtgcggctcgacccggggctcatcgcgatgtcgcgcggcggcgagccgctcgaccaggtgatgggccgcgccgaggaggaggagctgcccaagtacgagcccggcgcgctgcaggtggaggcggcggcgaagaggacggggccgttggtggaagcggggttcctcgacgcctacgtgcccaccggcgggatcgggatgcacacgatgaggtcgctgctcgactcggggcgcgtcgtgccgcccggcgagctacactgctcgcaggtacacacactctttgcctcagtaaccagtagtagtagctaaaattggaagtgtaaatttgggagaatttattgttgtatgttggatccggttcacatgaacactgacttgcttaaacatttcatatatctatgaagattgcaacaatgatttgaactgtaggagtaataatgagtagagtccatggcaaaaggtgggaagatgtttatagcatgtttcctgtagtaattgcgactaaatttaattaattaatcgattgcgaggaaatttcaagaaggccagggtgtaaaagaatttgattgagtttgggtcctcagtccttgctcttctgctcctgcaacagaggactgaggactagcggcgagcaattgagtttgagttagtttggttcagcaagataacatctgctctgggtggcacccactattggatctggcaaattggcaaatagcaaggcagcaatgttagtgctggccacaggtttattgggctagtatgggaactcctaacaatgagtcaatgagctcctttctttttgtttggtgagggagatgggtgtgggcaagaaatcttacaggctataatttcagtcttcaaagtggttatagttgtttcattccctccctttcttttttgttctactgttgacttggcagtttgatggaattttctttttctcttgttaatgagaaccccatgagaaccaactggctatataatgaataaatattttgattcggttatttggtttagggagaaaaaaaaagctttcggttatttgattagtcaagttaatcgtgccgacgccttgtgcaactgtattgctgtaacatatttgatgccttgattgatgcactgtactcatgcttttggttatttgatttagttctgattggttgcaaatttaccatatcaatacagatgtagttgactatttagcgaattgcttaaaattttgcttggatatgggtagtctgttttgagctttgaagatgtatctttgtagcctttataacactagattttttatgaagaaacacatgaacctctcaagaagcagagcattgaattcattccatgactcctattgttatattgcaggattcatttcttcaccaatgtatacatatcacagtaatattttcgtaaagctcccctaggataaattcctttctaatgttattatatttgttgcagtgggttgaagaaccaacacttctagtaactcgttttgaatatgcaaaccttttccacacaattacggactggtacagtgcatatgtcagttccagagtcacggatttacctaaccgccctaatgtggtctttgtggatggacattgcaaggtacgttacacgtgatgcattttgagttgctacattctttgattgttgatgcactgcagtttagttggtctatttcatgaactatatagcctgagttatggactttatggtaattagtctgtttcccttcctcatttccctgccagccaggctgccacatttccatttcccttcgctcctttataatgtgattctcctctttccgggttattacaatagcttaatttgtagtacattggaatacacttcaggagagtatcaacgtcatcttagagaagtacagttacagacagttgtattgaaatactagaaagtgaaacaagaagcagaactttgactttattggtcataaaatcagtcaactggggttaaccattttgccattttagagcatgcctcttcacccatcatctcaaaacctgctcataaatagcagaacagtttcatcacttcatgactgcactgcatgcgattctttcgacttgttactgtgaagtcaggccaggaccaagtagaataatgataattatattcctcttctatttaatgatgcaacggaaatatctgagtagggtttcttgtgcaatgatttccttcatattgcaaatcaggagcatggtggttcaattttgccattcatataggttttattcaacgaaacctgaaaacatgcatgcagatactgtttgatgagtgcggcagcatattgtgtgattaatgctagttaacaagacggctcattttttactcaataacagtgtatatgcttttgtcttttaacagtatgatctgacattcacaggcacaactggagcaaacatgggaagcacttttctcaaatgtgacatatgttaagaatttctctggccctgtttgttttcgacatgcaattctttcaccattgggctatgagactgcgctatttaagggccttagtgagagctttagctgcgaaggtgcttctgcggagtccctcagagaaaagcctgatcaccagaaaacggcaaggttgtctgaatttggtgagatgattttagcttcttttgatcttctgagggatgacatactgtcatccaaaacatcaaatgggctcaatgttctctttgttcggcgagaggactacttggcccatccacgccacagtggaaaggttgaatctagactaagcaatgagaaggaggtatatgatgcaattgagggctgggcaaaaggtcagaaatgcaaaataaatgtcatcaatggtctttttgcccacatgaacatgaaggagcaactgcgtgctatacaggaagcttcagtagtaataggggcacatggggctggtctaactcacttggtttcagctaccccagatacaaaagtccttgaaatcatcagcagcatgtatcgacgcccacattttgcattgatctcacactggaagagcttagagtatcatgccataaatctccctggatcatatgcaagggtaacagatgttatcaatgagttgagtaatatactgaaaggttttggatgctgagacagagctaggtattcatcaggaaagtcaccatactaacaacacaaatgcttacaatttcaatggatgggaaggaggttatttgcatctgtgatctgtgaactgatgcattaccagggctcatcacttcatcggaggaatttttatgctgccaaatgcagagagagattgtgctgacaagtgacaatctttaatctgcatatcgtgtggaacaagaaggcaatccttccccccttcctgacatcagccgacgacatgaaaaccaatccatgctgcgcacacttttctaccatgaattcatggtcttgaggaccgatcctcaaactgtaattgtaattcatcatttgggacattcggcgacaattcttgtatgttaatgcataatgttgagtgcttctcccccactgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0503800, RefSeq:Os08g0503800