BGIOSGA000840

From RiceWiki
Revision as of 18:07, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA000840

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000840, complete gene.

LocusTag

OSJNBA0014K08.27-1

Ensembl Transcript ID

BGIOSGA000840-TA

Ensembl Protein ID

BGIOSGA000840-PA

Length

1674

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34372771..34374444

Sequence Coding Region

34374154..34374444,34372771..34373643

Genome Context

<gbrowseImage1> name=IndicaChromosome01:34372771..34374444 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:34372771..34374444 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGTGACGGCCGAGTTCGGCGGCGCCTACTACGGCGGCGCGGCGGGCCGCGAGAAGAAGGCGCTGCAGCAGGGGTGCGGGGACCACTTCGCCGTGGACGACCTCCTCGTGTTGCCCTACGACGAGGAGGATGAAACAACAAGGGAGGGTGAGGCCACCGGCGGTAAGGAGGAGGCTGCCGGCTTTGGGAACGCGTCGGCGGACTCGTCGACCATAACGGCCCTGGATAGCTGCAGCAATTCCTTCGGCCTAGCCGACGGCGACTTCCCCGGCGAGCTGTGCGAGCCGTACGATCAACTCGCGGAGCTGGAATGGCTATCCAACTATATGAACGAGGGAGACGACGCATTCGCCACCGAGGACCTCCAGAAGCTGCAGCTCATCTCCGGCATCCCCTCCGGTGGGTTCTCGACGGCGAGCGTCCCGTCGGCTCAAGCTCAAGCTGCGTCGGCGGCTGCCTCCATGGCAGTGCAGCCCGGCGGCTTCCTGCCGGAGGCCCCTGTCCCCGCCAAGGCACGAAGCAAGCGCTCCCGCGCTGCGCCTGGCAACTGGTCGTCCCGCCTGCTCGTGCTGCCGCCGCCTCCGGCCTCCCCGCCGTCCCCGGCATCCATGGCCATCTCGCCGGCGGAGTCTGGCGTGTCGGCGCATGCGTTCCCTATTAAGAAGCCGTCGAAGCCGGCTAAGAAGAAGGACGCGCCGGCGCCACCGGCGCAGGCGCAGCTCTCGAGCGTGCCGGTGCACTCGGGCGGCTCGGCGCCAGCGGCCGCGGCCGGGGAAGGGAGGCGGTGCCTGCACTGCGAGACTGACAAGACGCCACAGTGGAGGACGGGGCCGATGGGGCCCAAGACACTGTGCAACGCGTGCGGGGTGCGGTACAAGTCCGGGCGACTGGTGCCGGAGTACCGGCCGGCGGCGAGCCCCACCTTCATGGTATCGAAGCACTCCAACTCCCACCGCAAGGTGCTGGAGCTGCGCCGGCAGAAGGAGATGTACCAGCAGACGCCGCATCATCACCAGCCGCAGGTGGCCGCCGCCGGTGGAGTGGGGAGCCTAATGCACATGCAGAGCTCCATGCTGTTCGACGGAGTGTCGCCCGTCGTGAGCGGCGACGACTTCTTGATCCACCACCACCTAAGGACAGACTTCCGGCCGCCCATCTAG</cdnaseq>

Protein Sequence

<aaseq>MEVTAEFGGAYYGGAAGREKKALQQGCGDHFAVDDLLVLPYDEEDETTREGEATGGKEEAAGFGNASADSSTITALDSCSNSFGLADGDFPGELCEPYDQLAELEWLSNYMNEGDDAFATEDLQKLQLISGIPSGGFSTASVPSAQAQAASAAASMAVQPGGFLPEAPVPAKARSKRSRAAPGNWSSRLLVLPPPPASPPSPASMAISPAESGVSAHAFPIKKPSKPAKKKDAPAPPAQAQLSSVPVHSGGSAPAAAAGEGRRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMVSKHSNSHRKVLELRRQKEMYQQTPHHHQPQVAAAGGVGSLMHMQSSMLFDGVSPVVSGDDFLIHHHLRTDFRPPI</aaseq>

Gene Sequence

<dnaseqindica>1..291#802..1674#ATGGAGGTGACGGCCGAGTTCGGCGGCGCCTACTACGGCGGCGCGGCGGGCCGCGAGAAGAAGGCGCTGCAGCAGGGGTGCGGGGACCACTTCGCCGTGGACGACCTCCTCGTGTTGCCCTACGACGAGGAGGATGAAACAACAAGGGAGGGTGAGGCCACCGGCGGTAAGGAGGAGGCTGCCGGCTTTGGGAACGCGTCGGCGGACTCGTCGACCATAACGGCCCTGGATAGCTGCAGCAATTCCTTCGGCCTAGCCGACGGCGACTTCCCCGGCGAGCTGTGCGAGCCGGTAAATTCTTTGGCCACCTTTTGTCTTGTTAATTACCTTGGATTTTGCAGTAGAGGTGCCAATCATTTCTGGCAGCTCCTGCATATCACTTCTTCTGAAATTGTCGTCCCTTTCATTTGCTGAACTGATCTAAACTAGAGCTATGTATTTTATCATCTTGTTTTACGCCTCGAGAGAATTTGAATGCATTATTAGAAAAAGAAAAATTCGCAGCTGTTTGTTGGCTCGGCTGTTACGCTGTCCCATAATAACTCCCGTTAAACCACACAAAATTTGTCGCCTATAATTATGCAGCTCCAATTCGAACTTTTCTCCCAGATAACAAAAATGGAAGAAAAAACCCGTTAATGTACTTGAACTAACGATACCAAAACGGTAGCCTTTTAAACTGAAGCAGTTGACTGCCATGTACTCTGGAACAAACGAGAATTCCATTATCAAAATTGTTTAGCTTACGAAAGCATATAGCACAATAATAGGACGCTGAATTTACTGTCGGATTTTCTGCAGTACGATCAACTCGCGGAGCTGGAATGGCTATCCAACTATATGAACGAGGGAGACGACGCATTCGCCACCGAGGACCTCCAGAAGCTGCAGCTCATCTCCGGCATCCCCTCCGGTGGGTTCTCGACGGCGAGCGTCCCGTCGGCTCAAGCTCAAGCTGCGTCGGCGGCTGCCTCCATGGCAGTGCAGCCCGGCGGCTTCCTGCCGGAGGCCCCTGTCCCCGCCAAGGCACGAAGCAAGCGCTCCCGCGCTGCGCCTGGCAACTGGTCGTCCCGCCTGCTCGTGCTGCCGCCGCCTCCGGCCTCCCCGCCGTCCCCGGCATCCATGGCCATCTCGCCGGCGGAGTCTGGCGTGTCGGCGCATGCGTTCCCTATTAAGAAGCCGTCGAAGCCGGCTAAGAAGAAGGACGCGCCGGCGCCACCGGCGCAGGCGCAGCTCTCGAGCGTGCCGGTGCACTCGGGCGGCTCGGCGCCAGCGGCCGCGGCCGGGGAAGGGAGGCGGTGCCTGCACTGCGAGACTGACAAGACGCCACAGTGGAGGACGGGGCCGATGGGGCCCAAGACACTGTGCAACGCGTGCGGGGTGCGGTACAAGTCCGGGCGACTGGTGCCGGAGTACCGGCCGGCGGCGAGCCCCACCTTCATGGTATCGAAGCACTCCAACTCCCACCGCAAGGTGCTGGAGCTGCGCCGGCAGAAGGAGATGTACCAGCAGACGCCGCATCATCACCAGCCGCAGGTGGCCGCCGCCGGTGGAGTGGGGAGCCTAATGCACATGCAGAGCTCCATGCTGTTCGACGGAGTGTCGCCCGTCGTGAGCGGCGACGACTTCTTGATCCACCACCACCTAAGGACAGACTTCCGGCCGCCCATCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000840