Os08g0504400

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Revision as of 13:07, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0504400| Description = Similar to Uncharacterized enzyme involved in pigment biosynthesis| Version = NM_001068713.1 GI:115477163 GeneID:4345...")
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Gene Name

Os08g0504400

Description

Similar to Uncharacterized enzyme involved in pigment biosynthesis

Version

NM_001068713.1 GI:115477163 GeneID:4345970

Length

5120 bp

Definition

Oryza sativa Japonica Group Os08g0504400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25017630..25022749

Sequence Coding Region

25018267..25018304,25018554..25018639,25018742..25018862,25019262..25019307,25019595..25019672
,25020508..25020614,25021772..25021832,25021979..25022038,25022175..25022257
,25022396..25022506,25022623..25022746

Expression

GEO Profiles:Os08g0504400

Genome Context

<gbrowseImage1> name=NC_008401:25017630..25022749 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25017630..25022749 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgccgtcgtcgtcgtcgtcgagcacggggccgatgggggtggcggtgtcgccggaggtggaagcggcgctggcgcgcggcggcgcggtcgtcgccctcgagtccaccatcatctgccacggtatgccctacccgaagaatctccagaccgccatggaggtggaggccgtcgtgagggagaacggggcggttcctgccaccatagccattctgaacggcgtgccacatgttggccttagcggcgagcaattgaagagcttggctgtaagtggaagacagtttcagaagacggctagaagggatattgcacatgttgtggcctctggtggtaatggtgcaacaacagtttctgccactatgtttttcgctcataaggttggcataccaattttcgtaactggagggattggaggtgttcatagaaatggtgaacagaccatggacatctcctcagacttaactgaacttggaaagactcctgtcactgttatttcagctggtgtgaaatctattttggacataccacggacacttgagtacttggaaactcaaggagtaacggttgctgcttacaaaaccaatgaatttcctgctttctttacagaagtcagcggatgtaaggtgccatgtcgcgttgattctcccgaagagtgtgccaagataatatatgcaaacaagaatttacatctaggatctgggattttgattgctgtgccgattcccaaggaacatgcagcttcaggaaatgctatagagtctgcaatacagaaagccctcaaggaagcagaggataaaaatataataggcaacgcgatcactcccttcatgcttgacagagtgaaagtactaactggacgatcttcgctagaagccaattgcgcttgtaaagaacaatgctcttgttggtgctaa</cdnaseq>

Protein Sequence

<aaseq>MSPSSSSSSTGPMGVAVSPEVEAALARGGAVVALESTIICHGMP YPKNLQTAMEVEAVVRENGAVPATIAILNGVPHVGLSGEQLKSLAVSGRQFQKTARRD IAHVVASGGNGATTVSATMFFAHKVGIPIFVTGGIGGVHRNGEQTMDISSDLTELGKT PVTVISAGVKSILDIPRTLEYLETQGVTVAAYKTNEFPAFFTEVSGCKVPCRVDSPEE CAKIIYANKNLHLGSGILIAVPIPKEHAASGNAIESAIQKALKEAEDKNIIGNAITPF MLDRVKVLTGRSSLEANCACKEQCSCWC</aaseq>

Gene Sequence

<dnaseqindica>4446..4483#4111..4196#3888..4008#3443..3488#3078..3155#2136..2242#918..978#712..771#493..575#244..354#4..127#gggatgtcgccgtcgtcgtcgtcgtcgagcacggggccgatgggggtggcggtgtcgccggaggtggaagcggcgctggcgcgcggcggcgcggtcgtcgccctcgagtccaccatcatctgccacggtaagctcgcgcctcgccgcctcctccccaccccgtctccctcccggattacatggctcactccggcgatgtgcgcccgcggctgggggacgcgtttggctttcttcccatcccaggtatgccctacccgaagaatctccagaccgccatggaggtggaggccgtcgtgagggagaacggggcggttcctgccaccatagccattctgaacggcgtgccacatgttggtgagtcctgtgatttttcctgtgactcggagatcagatacatgttcaactgttcaagtgctggaggcgtgatccgtagttgctagctactatgaattattctccaattaacaccggataattttcgtaatgtgataggccttagcggcgagcaattgaagagcttggctgtaagtggaagacagtttcagaagacggctagaagggatattgcacatgttgtgagtaccttgcacactagaaattggtcgttcagaatgttttccaatgtgttcagttatatctgcactaaaactttacagttgatatatgtttctcgtcttattgcttcctgtaacgagttttactgattgaaaggtggcctctggtggtaatggtgcaacaacagtttctgccactatgtttttcgctcataaggtcagagccaaaaacatcttactgctcttgttactgttaatttatctttccttgatttgatagcctttttcttgttcatctttgttacatgtagttggtgccaatcattcatctctatatcaaactaaagttgctctcaaattcaggttggcataccaattttcgtaactggagggattggaggtgttcatagaaatggtgaacagagtaagtaccttcctccttccaatcgtgtaaggagtcccttgctatctgcacattttacagttgatgcttcaatcagtttttctgagttatgaatggatgctgtagccttccattttaatatcgtttactattaccatgggtctaaatgtggattatagcagctcatgcctgatagaggtcatgtggcttaatagctctaaaagagggcaagtgaaatgacatgtttattatatctagacgatgtaattttttgttgatttataccatttcgatcagtttgtgtttcttcatgtgttgaaaacttagcagaaatttaatatgcctcttgattttttgtaatctagtttgtctatgcctcttgattttttgtaatctagtttgttttctttagcttttctgcatcctgttgtcattctctagttaatttaagagtaaagtgcacgggcggtccttaaacttgcaggggtatgtcatctaggtctctaaactctcaaaatacatatccaagtccaagaacttgtcatagtgtgtcatttaggtcccaaatcgccccagcccctataggatcctacgtggcactgatgtggcatgccacacggacaagacgtggcatcattttgactaacaaatgaaacccatttatctttttcttcttttcttatcttttcctcctcctcttttttttctttcttctcctttttttttcttttcccgagtagaagaaaggaaaaaaaaagaagaatgagaagaaaacgaagaaaaaagaagggaaaaaggaagaaaaggacatatcacgtccatatggcatgccatatcagcgccacataggattctataggggctatgtcgatttgggacctaaatgatacactttgacaagttctggaacctagatgtgcattttgagagtttggggacctagatgacacaaccttacaagtttaaggaccgcctatgcactttactcttaatttaagatgctgatggtgttataccatctactcagtttgaaccctgaagctaaatatttatttatatccattatccacacgttctttgaaatacattaccgacagtttgttgtatatacttgattaagacatcaattgattaagcacacgtatgtcctattaaacagtttgcactgtttgatgcagccatggacatctcctcagacttaactgaacttggaaagactcctgtcactgttatttcagctggtgtgaaatctattttggacataccacggacacttgagtacttggtattacctatcactcccactcttcaaaagaatggctctttgatctgttaaaagtgaacttccgtcagttcatgtagattgttttcttgttagaacattggatacttcacacactgtgtatcagtattttctggattctgttcatgaagtatgagtggagcagctgttttcaggggctctccaacaaaattctgtagtcatatctgttagaccactctgatataggaatactaatgtagcattataatttaaatatgaagtattacaaaacaaggtttacctagtagcaaagcaaaaaatgctgtggaattggtagcttatttttactcctagtgatgtgctgccataagtatgctgttagctgcaccgttactatgataggatgatacactgtgcaaattacagagccaggatctgatacagtaagaaaccaggaaccagaaattagttaccacgaaaattagctcacttcctatgtattttttgttgttatatttccctcaagaaatagaatgctgttgcatcagaacctgaaagttttctcatgtccatgataactccatccagacaagtaaaactgctagatctacaactgagggtttatagttttccagaatcatacgtttgttcattttattctccataatctacgaccatccttttcaagtaagtcatgacaattttctggtgtttcttggtatagacaagttatttctttaggttttactcgttaaatgtgctatatttgaaatttggtgtatttctggctaggcatttcaatgaatgcaatgttgtttggtgctcaatcgtataggttaactgattgcattggcaggaaactcaaggagtaacggttgctgcttacaaaaccaatgaatttcctgctttctttacagaagtcagcggatgtaaggtagaataatttgcttatgtaaaatgtttataagctatatttaatttttgttttgtttgtttaaggagattttcttttctgtaatctggtgtgaatctgtataaaaaagaagagctggaaatgagtatgggtgttgatttttcaatgttgtgtattgtgttgatctgaaggtcccagaatctttcctttatatattttgccatgagcccttggtacagtatcttttgtctcactgtactgcagtgttaggatgtttgtactaactggctcctgtctgcttaatttaggtgccatgtcgcgttgattctcccgaagagtgtgccaagataatatgtaagtattaaagttcgcatttaccccatctgtattcatatctgtatcatttgtgcgatattggtttgacatgcactgttggcacatgatccattaacccgaactgattgaactccagcagacatccaataccttttgacctttttactctgttggttacagaaagctactggccaatgttaattcagaatcacgtaaattcaacaccaatatcctattagaatctacaattgagtcagcataagattcagaactgaaagcagcacataacacgaatcgggagttcactattgtatagagtttgattttatcctatgaattactataactcaactggaaaaagaatttattgtaacacagagtttatcagcattgctgatttatatctattttttacagatgcaaacaagaatttacatctaggatctgggattttgattgctgtgccgattcccaaggaacatgcagcttcaggaaatgctatagagtctgcaatacagaaagccctcaaggaagcagagtattgtccttactcccaacctcctgctctctcactttatcttttctgtgtatttgtgatactaacagaaatgatatctaatgactttctatgttgtttcagggataaaaatataataggcaacgcgatcactcccttcatgcttgacagagtgaaagtactaactggacgatcttcgctagaagccagtatcctacaaatttaatttcaaactttgctgtattttgaaccacgatgattttcgtatttccctgtagttttgagcattgattagctatttatttctatttcaacatgcaatttggcatttggatcttttcaagttggactttatgagagaaaaatcaaaaggttcaaacgtttagatgaataacatctgatttccccctcttgttgtttcctgtgtcaatagaaacttctccttagcatattcagatattgcgcttgtaaagaacaatgctcttgttggtgctaaaattgctgtggccctttctgatcttcaccagagagtaacaaacagtaaggttctctcatcaataataatagtaaaatcctaattctgtaattatctctacaactaaatacttaggcatcctggttcataaagatttgcaaggttatctgttcttcttgcatgtttttagtttttactggatttagtctactgtctgtgtttattgttggagctagaccctagacttgtgatcacactcacgtctgctctgggccagtgatttgcttttttatgtgagatatcacactagcatctcctctgcctacatgttcaattgagacctaacaattttgaacttgctgtaacaggatttcggaggtctgccttatagagtgcatgtacaaaggcaagcgaggtctgaaacatggggcatcctattcatcctcacaatgtatgcttgtacaactagttggaaacttgtagcttcatccttttctggcactatataaatgaaacctgaggtgcgagtgcatgatttgtagcgagatttgctactgtagacttaaattagtacattccactccagcataacgtgttcttcactttttcgggcgtgttcttcacttttttgttaatctgatcttctgctttcaccttg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0504400, RefSeq:Os08g0504400