BGIOSGA000899

From RiceWiki
Revision as of 18:07, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA000899

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000899, complete gene.

LocusTag

P0690B02.26-1

Ensembl Transcript ID

BGIOSGA000899-TA

Ensembl Protein ID

BGIOSGA000899-PA

Length

2512

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33324336..33326847

Sequence Coding Region

33326787..33326847,33326287..33326671,33326063..33326201,33324987..33325145,33324846..33324902
,33324336..33324533

Genome Context

<gbrowseImage1> name=IndicaChromosome01:33324336..33326847 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:33324336..33326847 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCTGTAAACTTTGTTGCTATGATCTGTAAAGGCGTGAGCTTTGCATTGCTGGAAACGCGGGAGGCACGGGGTGGTGGTGCACCATCACGTGGAGGATTTGGCCGTGGTGAGCGTGGCCGTGGCAGAGGTGGACGGGGATATGGCCAGAACCGTGATTTTGGTGGAGACAATGCCAATGGCTACCAGGGTGGTTACGGTGGAGGCTATGGAGATGGGGCTGTTGCTGCTGGTGGAGAAGGTGACAGGGAGAGAGGCCCTCGAGCTCCATTCCATGGAGGTAGGCGTGGTGGCTACCGAAATGGTGAATATGGGGATGATTCTGAGAGGCCGCCCCGGAGAAATTATGAGCGCCACAGTGGTACTGGCCGTGGTTATGAGATGAAGCGTGATGGTGCAGGGCGTGGGAACTGGGGAACTGCTACTGATGAGGCTCTTGCACAGGAGACTGAGGAAGCCTTGAAGGTTGAGGAGAGTGCTCCTATTGCTGAGAAACAGGGTGAGCAGGATGATGCTCCAACTGGAGAGAAGGATAGCAAGGAGGGTGCTGCAAATGAGGAAGAAGAGAAGGAAGAGGATAAGGAGATGACTCTTGAGGAGTTTGAGAAATTAAGGGAGGAAAAGCGGAAAGCTCTTCTTGCTTTCAAGGCTGAAGAGAGGAAGGTTGAGGTTGATAAGGACCTGCAGTCTATGCAGCCACTTTCTACCAAGAAAGGAAATGATGAAATTTTCATTAAGCTGGGTTCTGACAAGGATAAGAAGAAGGAAAATGCTGAGCGCGATGAGCGTGCCAAGAAGTCTGTGAGCATCAATGAGTTCCTGAAGCCTGCGGAAGGAGAAAGGTACTATGGCGGCCGTGGTCGTGGAAGGGGGCGTGGAGATCGTGGCGGTCGTGGATATGGTGGTGGTTACCAACGTGGCCCATATTCTACATCTGCACCATCCATTGAAGATCAGGCTCAGTTCCCAACCCTTGGTGGGAAGCCGCGTGCGTGA</cdnaseq>

Protein Sequence

<aaseq>MSAVNFVAMICKGVSFALLETREARGGGAPSRGGFGRGERGRGRGGRGYGQNRDFGGDNANGYQGGYGGGYGDGAVAAGGEGDRERGPRAPFHGGRRGGYRNGEYGDDSERPPRRNYERHSGTGRGYEMKRDGAGRGNWGTATDEALAQETEEALKVEESAPIAEKQGEQDDAPTGEKDSKEGAANEEEEKEEDKEMTLEEFEKLREEKRKALLAFKAEERKVEVDKDLQSMQPLSTKKGNDEIFIKLGSDKDKKKENAERDERAKKSVSINEFLKPAEGERYYGGRGRGRGRGDRGGRGYGGGYQRGPYSTSAPSIEDQAQFPTLGGKPRA</aaseq>

Gene Sequence

<dnaseqindica>1..61#177..561#647..785#1703..1861#1946..2002#2315..2512#ATGTCGGCTGTAAACTTTGTTGCTATGATCTGTAAAGGCGTGAGCTTTGCATTGCTGGAAAGTAGAATTTATTCCCCTCTTAAAACCTGCTGTTCGAATCTTCGATCAGTTTTTAGAATTTATTCCTGCAAACACCACTGGTTCTGATTTCAGCGCCTGAATTGTATTTGTTTCAGCGCGGGAGGCACGGGGTGGTGGTGCACCATCACGTGGAGGATTTGGCCGTGGTGAGCGTGGCCGTGGCAGAGGTGGACGGGGATATGGCCAGAACCGTGATTTTGGTGGAGACAATGCCAATGGCTACCAGGGTGGTTACGGTGGAGGCTATGGAGATGGGGCTGTTGCTGCTGGTGGAGAAGGTGACAGGGAGAGAGGCCCTCGAGCTCCATTCCATGGAGGTAGGCGTGGTGGCTACCGAAATGGTGAATATGGGGATGATTCTGAGAGGCCGCCCCGGAGAAATTATGAGCGCCACAGTGGTACTGGCCGTGGTTATGAGATGAAGCGTGATGGTGCAGGGCGTGGGAACTGGGGAACTGCTACTGATGAGGCTCTTGCACAGTAGGGGAATTTTATCTGTTTATGATGCCTCTTGTCTTGGATAGTGAAGGCACAGATAACTCATAGTGTTATTCTTGGTATGTAGGGAGACTGAGGAAGCCTTGAAGGTTGAGGAGAGTGCTCCTATTGCTGAGAAACAGGGTGAGCAGGATGATGCTCCAACTGGAGAGAAGGATAGCAAGGAGGGTGCTGCAAATGAGGAAGAAGAGAAGGAAGAGGATAAGGTAATGATTTTCATCTGTTCTCTACTCTGCCTAAATTGAGGAAACTGCACTGCTATTTTAGAGGTTTGCTGAAATAAAAAATTTATTCTTGTGTGTCTAATAGTACATTTTGGAACTATTTTTGCTACGTCACTTTTACGAGTCTATTGTTGTTCTGTGTTGCTGGTATTATTTGGCATGTCGCTATCATATTGCTTACTATGTGATACTTTTCTACTGTCAAAATGATGCAATTCCATCACCCTGGATGTGACAAGTAGTTGCAAATTCAGTTGGTGGTTGGGTTTACACATGAGTTATCAACCCAAGTTAACTACTATCTGCACATGCATGTTCACATATCATGTTAACAGGATTGTGCTGGGCTGATGGACTGTATATTTTTCAACTCAAGCGATACTTAATTTCAACCACAGCATTCTTAATCAATTTGCGTGTAATACAATGGGATAAAAGTGTTTGTGTACACTTTTGATGTGCGGTATTATGGGTTCCAGAATATAGACGTTTTATCTTACTACACTGTTTTGTCTATACATCTTGCTTGAAGCCAATTTGCTGGTAATGTTTTGTATTAACACACCCAGTAGATGTATGGTAGATTGGTAGTTGTGTATTATGATGTGGTGATTTCATCTTACTGTCATTTTTTCCTGTGCATTTTTCTAGAACTAATTTACTTTGCTAGTAATGTTGCTACCTTATTGTTACCGCTTATTTCTTGAACTTGGTTGCTATACTCTATCTGTTCAGCCCATGGAACAAGCTATATATAGTTACATTGAAAGCTTTGAACAGCTATTACACTTTTCTGGTTTTCCCAGTGAATTTAATTGTGATTATTGCATCTGCTAATGCATTTGCTGTATAATAAGATCAGCACTGACCTCCCAATCTTATTATATTCTACTATCTAGGAGATGACTCTTGAGGAGTTTGAGAAATTAAGGGAGGAAAAGCGGAAAGCTCTTCTTGCTTTCAAGGCTGAAGAGAGGAAGGTTGAGGTTGATAAGGACCTGCAGTCTATGCAGCCACTTTCTACCAAGAAAGGAAATGATGAAATTTTCATTAAGCTGGTATATTTCTCAGTGTGCTCTATTTCAATCCCTACAGTTGTCTGATTCTAGAATTTTTTTTGATTAAATGTATCATTTTCTTAGGGTTCTGACAAGGATAAGAAGAAGGAAAATGCTGAGCGCGATGAGCGTGCCAAGAAGGTATTTTAACTTACATACGTAGTAATTGGCAGACCTTTACATATTCTTCGTAGGTCAGTCTGGATGCCAAAATCTTGTAAATTTGAGGTTCTTGTACACATTCGTTTTGGTTGTGAGTGTTGGGTAGATGGATCTGATAATAAGACATCTGTTTGGAAGAACATGGGGATGCCTTGGTAAAATGACTACTAATAAATTTTCAAACAAGCCTATGGTGTAATTATTGGATATTCCTAGATTTTGCGATTGATAGCAACTCAATTTATCTTGGAAAAAAAACTCAGGTTTCTAATCTGTTAAATTTTGTTCCAGTCTGTGAGCATCAATGAGTTCCTGAAGCCTGCGGAAGGAGAAAGGTACTATGGCGGCCGTGGTCGTGGAAGGGGGCGTGGAGATCGTGGCGGTCGTGGATATGGTGGTGGTTACCAACGTGGCCCATATTCTACATCTGCACCATCCATTGAAGATCAGGCTCAGTTCCCAACCCTTGGTGGGAAGCCGCGTGCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000899