BGIOSGA000916

From RiceWiki
Revision as of 18:07, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA000916

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000916, complete gene.

LocusTag

OS01G0715600

Ensembl Transcript ID

BGIOSGA000916-TA

Ensembl Protein ID

BGIOSGA000916-PA

Length

2483

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33009530..33012012

Sequence Coding Region

33011505..33012012,33010336..33010363,33010157..33010242,33009882..33010039,33009710..33009786
,33009530..33009608

Genome Context

<gbrowseImage1> name=IndicaChromosome01:33009530..33012012 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:33009530..33012012 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGTCCTGGAAGGACATCTACCTCGTTCTTGAAGCGACAGTTCCACTATATGTAGCTATGATACTGGCCTACCTATCCATAAAATGGTGGAAGCTGTTCACCCCAGAGCAGTGCTCTGGGATCAACAAGTTTGTGGCGAAGTTTTCTATTCCTCTGCTCTCTTTTCAGGTCATTTCCACAACCGATCCTTATGACATGAATATCAAGCTCATATACTCGGATATCCTACAAAAGTCGCTTGCCTTGCTGGGATTTGCAGCCATTTCCAAAGCATGCTGTGCAGAGAAGTTTGACTGGCTGATTACTGGTTTTTCTTTATCAACACTTCCCAATACACTGATTGTTGGCATCCCGTTGCTGAAAGGAATGTATGGTGAGCAAGCCGGCAAACTACTAAGTCAGATAGTAGTCCTCCAGAGCCTAATTTGGTACACTCTTCTTCTATTTTTGTTTGAACTTCGGGCTGCTAATGGAATGGCCACCACTACATCATCTGAAACTACAGGTTTAATTTGGGCACTGGTCGGCTTCAGGTGGCACATAAGATTACCGTTGATTGTCAGCAATTCTATAAGGATACTCTCGGATGGAGGGCTGGGAATGGCAATGTTCAGCCTAGGCCTTTTCACTGCTCTACAAACTAAAATTATAGCCTGTGGAGCTAAAAGGATGCTACTAGCATTAGCCATCAGGTTCTTTCTAGGACCAGCACTAATGGGTATGTCTTCTTATGCTATTGGAATGCGTGGAGTATTGCTGAAGATAGCCATTGTACAGGCAGCTCTACCTCAAGGAATAGTTCCGTTTGTGTTTGCAAAGGAGTACAATGTCCAAGCAGATATTCTGAGCACTGCGATAATTGTTGGCATGATGGTTGCAGTTCCTGTGGCGCTGGCTTACTACTTTGCAATGATCATCCCAGCTATCAAATAA</cdnaseq>

Protein Sequence

<aaseq>MVSWKDIYLVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVISTTDPYDMNIKLIYSDILQKSLALLGFAAISKACCAEKFDWLITGFSLSTLPNTLIVGIPLLKGMYGEQAGKLLSQIVVLQSLIWYTLLLFLFELRAANGMATTTSSETTGLIWALVGFRWHIRLPLIVSNSIRILSDGGLGMAMFSLGLFTALQTKIIACGAKRMLLALAIRFFLGPALMGMSSYAIGMRGVLLKIAIVQAALPQGIVPFVFAKEYNVQADILSTAIIVGMMVAVPVALAYYFAMIIPAIK</aaseq>

Gene Sequence

<dnaseqindica>1..508#1650..1677#1771..1856#1974..2131#2227..2303#2405..2483#ATGGTGTCCTGGAAGGACATCTACCTCGTTCTTGAAGCGACAGTTCCACTATATGTAGCTATGATACTGGCCTACCTATCCATAAAATGGTGGAAGCTGTTCACCCCAGAGCAGTGCTCTGGGATCAACAAGTTTGTGGCGAAGTTTTCTATTCCTCTGCTCTCTTTTCAGGTCATTTCCACAACCGATCCTTATGACATGAATATCAAGCTCATATACTCGGATATCCTACAAAAGTCGCTTGCCTTGCTGGGATTTGCAGCCATTTCCAAAGCATGCTGTGCAGAGAAGTTTGACTGGCTGATTACTGGTTTTTCTTTATCAACACTTCCCAATACACTGATTGTTGGCATCCCGTTGCTGAAAGGAATGTATGGTGAGCAAGCCGGCAAACTACTAAGTCAGATAGTAGTCCTCCAGAGCCTAATTTGGTACACTCTTCTTCTATTTTTGTTTGAACTTCGGGCTGCTAATGGAATGGCCACCACTACATCATCTGAAACTACAGGTACGTACCTAAACTGACTGACTCGATTTAGGATGAAATTTGAAGTTGCTTCCTCGAAACAGCATGGCTTAAACACATTTACATCTTTATTTAAGATTAGAAATCCAAGATCCTGGCTCCAATTCGAAATAACATTGTTCAAGTAATGAACTAGTATTTGAGCATCGTTTCCTAGTACCAACTATATTTCTTCTGATTTTCATTATTTTTTTTGTGTGTGTGCCCATGCTAACCTTCACAAATAGTTGCAAAAATGAAAAACTCCTGCAAATGTTATAGATCTTACTTTCCAAACGAAAGAAGCCTGCTAGATACTCAAAGAAATGTCGTTTAAGTGACCAATGTAAGAAAATATGCATTCTATGATGGTAGCTCAAACTGATCTTATAGATGTCGTATAATGCAATCATATTATTGTGAACTGAGAATACACTAAGCAAAGAGAACATAGCTAATTCTCCGTTTAATAGAAGAACCAATGAAGTGAAATACTGTTCTACTTGCATCACTTCTATTTTAATCTGCAGTAGCAACTATAGTGTCATACTAACAGGAACTGGCCTACTCTGCACAAATATACAACTAAGTAACTATATTGTCTAGAAACCACCTGTAGTATTTAAAGTTCAGAATGAAACAGAGATTTGAATCGCCCAATTTAAAGTTGCCTGTACAATCATTTAAATTACTTCATTTTTTTAGATAATGGATAGAAATCCAGCCTCTATATCCAAAAGTGGATATACACAGCCAAGGAGAAATTGCTTCATACTTTTTCATTGTAATGCAGTTCACTTTACGCAATAGATTTGTCTGAAACATTGTACATGAACTTGCTTGAATTATCCAGTGATTGAAGTATATTTTGAACTTCTTTTTCATATACGCCTCACCAGCAAGCAGCTTAACTTATCTTCTGGGAATTTAACTTATTATTCTTTATTAAATTAGTTCGATGGTTTTTATCCCATGTCATGTTTCAAAATTGAAGCAGAATCAGGTACTAGAGGACCTACACAGCAAAGATATGGAGATGTTCAGGCAAAAGGTGTATCAGCAAGATGTTCTTGTGCTTTTCGCTTTTTGTTGGTGGTTGGTAAGAAGCTAGTGATGAACCCCAACATGTATGCATGCCTGATAGGTTTAATTTGGGCACTGGTCGGCTTCAGGTATGTTAATGAGTTTATATGAATCAATTTGGCTTCAAGCAGAAATGCAGCTGTTATTGACTTACTTCATACAACTCCATAACATACCCACAGGTGGCACATAAGATTACCGTTGATTGTCAGCAATTCTATAAGGATACTCTCGGATGGAGGGCTGGGAATGGCAATGTTCAGCCTAGGTAAGAATAGCAGGATATCTGATTCAGCTTGATGCAATGCAGATAAACTTCTAAATACGTCTAAACTTTGCGAAAACCAATTATGTTATTATAAATTCTAAATACTTCTAATCACAGGCCTTTTCACTGCTCTACAAACTAAAATTATAGCCTGTGGAGCTAAAAGGATGCTACTAGCATTAGCCATCAGGTTCTTTCTAGGACCAGCACTAATGGGTATGTCTTCTTATGCTATTGGAATGCGTGGAGTATTGCTGAAGATAGCCATTGTACAGGTATATTCTAGTTCTTTCTTTGGACGAGCTATTATTTGTAACTTTGAACAATTCAACCACAGAAATTACGATTAACCTGTCAAAATCACATTCAGGCAGCTCTACCTCAAGGAATAGTTCCGTTTGTGTTTGCAAAGGAGTACAATGTCCAAGCAGATATTCTGAGCACTGCGTAAGTAGATCACCTACCACGATACGATCCTATGCTTGTATATATGAAGAAGCAGGGAAGCATCATTAGCCAACACCTTACACTGATCTCTCTTATGGCAGGATAATTGTTGGCATGATGGTTGCAGTTCCTGTGGCGCTGGCTTACTACTTTGCAATGATCATCCCAGCTATCAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000916