Os08g0505900

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Revision as of 13:07, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0505900| Description = Similar to DNA-damage-repair/toleration protein DRT100 precursor| Version = NM_001068720.1 GI:115477177 GeneID:434597...")
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Gene Name

Os08g0505900

Description

Similar to DNA-damage-repair/toleration protein DRT100 precursor

Version

NM_001068720.1 GI:115477177 GeneID:4345978

Length

1562 bp

Definition

Oryza sativa Japonica Group Os08g0505900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25103807..25105368

Sequence Coding Region

25104181..25105323

Expression

GEO Profiles:Os08g0505900

Genome Context

<gbrowseImage1> name=NC_008401:25103807..25105368 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25103807..25105368 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcatcatctcccgctccaagccccgccgcgccgccgctcctcctcgccgcgctcgcggcgctcgccgtggtcgcgtccgcctccgccgccgcgtgctccgcgggcgaccgggacgcgctgctggcgatccgggcggcgctgtcggaggcgcacctcggggtgttctcgtcgtggacgggcaccgactgctgcaccagctggtacggcgtgagctgcgatcccaccaccggccgcgtcgccgacctcaccctccgcggcgaggccgacgaccccgtcatggcgcccgccggccgcccggcctccggcgtcatgtccggctacatctccgacgcggtgtgccgcctcggccgcctctcctccctcatcctcgccgactggaagcagatctccgggcccatcccgccgtgcgtcgccaccgccctcccttacctccgcatcctcgagctccccggcaaccgcctcaccggcgagatcccgcgctccatcggcagcctctcccgcctcaccgtgctcaacctcgccgacaacctcatcgccggcgaaatcccaagctccatcacctcgctcgcgtcgctgaagcacctcgacctcaccaacaaccagctcaccggcgggatcccggacgacgtgggcgacctcaccatgctcagccgcgcgctgctcggccggaacaagctcaccggcgccatcccaacgtcggtcggctccctgacccggctcgccgacctcgacctcgccgagaacggcctcaccggcgggatcccggacagcctgggcggcgcccacgtgctcacctccctgtacctcggcggcaaccgggtctccggccggatcccggcgagcctgctgcagaacaaggggctgggcatcctgaacctgagccggaacgccgtcgagggcgccatccccgacgtgttcaccgccgagtcctacttcatggtgctcgacctgtcccggaacaggctcaccggcgccgtgccgaggtcgctgtcggcggcagcgtacgtcggccacctcgacctcagccacaaccggctgtgcggctccatccccgccggcccgccgttcgaccacctcgacgccgcctccttcgccagcaacagctgcctctgcggcggcccgctcggcaagtgcacgtga</cdnaseq>

Protein Sequence

<aaseq>MASSPAPSPAAPPLLLAALAALAVVASASAAACSAGDRDALLAI RAALSEAHLGVFSSWTGTDCCTSWYGVSCDPTTGRVADLTLRGEADDPVMAPAGRPAS GVMSGYISDAVCRLGRLSSLILADWKQISGPIPPCVATALPYLRILELPGNRLTGEIP RSIGSLSRLTVLNLADNLIAGEIPSSITSLASLKHLDLTNNQLTGGIPDDVGDLTMLS RALLGRNKLTGAIPTSVGSLTRLADLDLAENGLTGGIPDSLGGAHVLTSLYLGGNRVS GRIPASLLQNKGLGILNLSRNAVEGAIPDVFTAESYFMVLDLSRNRLTGAVPRSLSAA AYVGHLDLSHNRLCGSIPAGPPFDHLDAASFASNSCLCGGPLGKCT</aaseq>

Gene Sequence

<dnaseqindica>46..1188#actctcactctgcagtgcagtgcccacgcgagccgagacgagacgatggcatcatctcccgctccaagccccgccgcgccgccgctcctcctcgccgcgctcgcggcgctcgccgtggtcgcgtccgcctccgccgccgcgtgctccgcgggcgaccgggacgcgctgctggcgatccgggcggcgctgtcggaggcgcacctcggggtgttctcgtcgtggacgggcaccgactgctgcaccagctggtacggcgtgagctgcgatcccaccaccggccgcgtcgccgacctcaccctccgcggcgaggccgacgaccccgtcatggcgcccgccggccgcccggcctccggcgtcatgtccggctacatctccgacgcggtgtgccgcctcggccgcctctcctccctcatcctcgccgactggaagcagatctccgggcccatcccgccgtgcgtcgccaccgccctcccttacctccgcatcctcgagctccccggcaaccgcctcaccggcgagatcccgcgctccatcggcagcctctcccgcctcaccgtgctcaacctcgccgacaacctcatcgccggcgaaatcccaagctccatcacctcgctcgcgtcgctgaagcacctcgacctcaccaacaaccagctcaccggcgggatcccggacgacgtgggcgacctcaccatgctcagccgcgcgctgctcggccggaacaagctcaccggcgccatcccaacgtcggtcggctccctgacccggctcgccgacctcgacctcgccgagaacggcctcaccggcgggatcccggacagcctgggcggcgcccacgtgctcacctccctgtacctcggcggcaaccgggtctccggccggatcccggcgagcctgctgcagaacaaggggctgggcatcctgaacctgagccggaacgccgtcgagggcgccatccccgacgtgttcaccgccgagtcctacttcatggtgctcgacctgtcccggaacaggctcaccggcgccgtgccgaggtcgctgtcggcggcagcgtacgtcggccacctcgacctcagccacaaccggctgtgcggctccatccccgccggcccgccgttcgaccacctcgacgccgcctccttcgccagcaacagctgcctctgcggcggcccgctcggcaagtgcacgtgacgtgccccaaccagagccgtccgatcgatcgggagagcctgatcgaacgtgtggtgtgcgatgtaccgtgtacgatgcaacgaacttacgtgttcgtatatatggttaattagttgctgcttaagtattaactcacttgggctatagttttgggcttgggtacatatagaacaagatgagaatttgtgcctagtgtgtgtgtgtgtgagagaaagaggaagtggttaaggaaaagaagaatgttttctctttcctgcctttctcttctttatacttttaaccttttttgctagtgatttacttgatagttctactttaaagtttgtattgtacaagtgacaaaagcataagaaatgctaaagatcttgtatgag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0505900, RefSeq:Os08g0505900