Os08g0506500

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Revision as of 13:07, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0506500| Description = ab initio prediction with EST support| Version = NM_001068724.1 GI:115477185 GeneID:4345983| Length = 2214 bp| Defi...")
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Gene Name

Os08g0506500

Description

ab initio prediction with EST support

Version

NM_001068724.1 GI:115477185 GeneID:4345983

Length

2214 bp

Definition

Oryza sativa Japonica Group Os08g0506500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25152645..25154858

Sequence Coding Region

25152645..25152923,25153264..25153317,25153409..25153469,25153806..25153879,25154538..25154644
,25154723..25154858

Expression

GEO Profiles:Os08g0506500

Genome Context

<gbrowseImage1> name=NC_008401:25152645..25154858 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25152645..25154858 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggccgccggcttacggctgcgcgccctcggcctgtgccgcggcaaccggggagcgttccccgccgcgcatggcggcggcggcggccggctccacccccgccgcccgcgcctcgcgggcgccttctgctcccttgctacgaccggcaacggagccgccgccgccgttggacccgtcgggagcggcgccgaggtcgcgcgcgccaagaggatgcttcacgtggtgctggtctcccctctgatcccgggaaacactggatcgattgcgaggacatgtgctgcgtcagcagttgggctgcatcttgtcggggtaagatatgttgttgtcaagattcatgactcctggaacgagttccgagattatttcatgaagcaggatggagaaaaacggttactggcatttaccaaaagaggcacgagcattcattcagatttctcatataagcctggggattggttagtatttggctctgagacgaaaggtttaccacaatctgcccttgaggactgctctagagaaggcctaggtggtggaactatacgaattccaatggtggaaacctatgtccggtgcctaaatctttctgttagcgtcggagtagcactgtacgaggcagctagacaactcaactatgaacagctccattatcagccggagctcccggaagaagcgcaaggactattccctgccgaggacatttatgcatga</cdnaseq>

Protein Sequence

<aaseq>MEAAGLRLRALGLCRGNRGAFPAAHGGGGGRLHPRRPRLAGAFC SLATTGNGAAAAVGPVGSGAEVARAKRMLHVVLVSPLIPGNTGSIARTCAASAVGLHL VGVRYVVVKIHDSWNEFRDYFMKQDGEKRLLAFTKRGTSIHSDFSYKPGDWLVFGSET KGLPQSALEDCSREGLGGGTIRIPMVETYVRCLNLSVSVGVALYEAARQLNYEQLHYQ PELPEEAQGLFPAEDIYA</aaseq>

Gene Sequence

<dnaseqindica>1936..2214#1542..1595#1390..1450#980..1053#215..321#1..136#atggaggccgccggcttacggctgcgcgccctcggcctgtgccgcggcaaccggggagcgttccccgccgcgcatggcggcggcggcggccggctccacccccgccgcccgcgcctcgcgggcgccttctgctcccgtgcgtggctgaaccgacccgtacgcccccgccgttcctcccgtctcacgtttcctcctctcgtgtttgtgtttgcagttgctacgaccggcaacggagccgccgccgccgttggacccgtcgggagcggcgccgaggtcgcgcgcgccaagaggatgcttcacgtggtgctggtctcccctctggtaagttttaccgctcggtttgcaactccttgtatactcagtgttcgatgaaatgcagctgttgcctgtactattgtcattaatcatcattactttgttcaaacggagggagaagatttggtttaggagttaggactatcactgttgtgtcagtgtgcggtttggtctggtgatttagaccctgtttagatgggactaaaacttttaagtcactatcacatcgaatgtttggacacaaattataaatattaaacgtagactattaataaaacccattcataatcttggactaattcacgagacgaatctattgagcctaattaatccatgattagcctatgcgatgctacagtaaacattctctaattatggattaattaggcttaaaaaattatctcgcaaattagctttcatttatggaattagttttgtaagtagtctatatttaatactctaaattagtgtctaaatatagggactaaagttaagtccctggatccaaacaccaccttactgatgtagtatggctctgtgaaagtgatttggacgagtgtgtttaaagcatcctacctgaattttctgttctgcatgtggagaatagataggagacttaaaaggagtcgctggttgtcactgaattataactgtacttcaatagatcccgggaaacactggatcgattgcgaggacatgtgctgcgtcagcagttgggctgcatcttgtcggggtaaggttagtgcttattgatagaacattgaatggtttctcttccttttacttgttctgttattcatcgggtactatgtgtgatctgaaaattttgtttgctgcaacgtttccagccattaggttttaaggtagatgacacgaagctgaagcgtgctggattggattactggccgtatcctaccgttttatacgttccacttaaataatgatactttatatgctttctaaagcactcatgctggaaatccagatcctaatgatattttcatgtatctattttgaccttttagtttgagtgatagcaattagcaaatctcaaccttgactgtacctattaagatatgttgttgtcaagattcatgactcctggaacgagttccgagattatttcatgaagcaggtatgttagatcagatgttctcttctaaggttgcatcaatgtagttatcgaatatgtatgaattttgaacctgtgtttttctctacatcaggatggagaaaaacggttactggcatttaccaaaagaggcacgagcattcattcagtgagtaaattacattgatcttttatctctctgtgaatcgtcaggaatttatatgcattttatcaaatcttatctaaacacttaaataagttaaataaccattgtctttttttagtaatgaattgtagctaatggatacatcatcaactgttagtctgttatatttgctttggttttctttaatgatcgatcgcacaaatggacatttctatacagacaaattgacttgaatatctagctgccacagacatgtacaattcaaaatgatatactgatatgtgaggcagattcttcaattaattatgacgattgtttgactgttgttcacatattggtttaggatttctcatataagcctggggattggttagtatttggctctgagacgaaaggtttaccacaatctgcccttgaggactgctctagagaaggcctaggtggtggaactatacgaattccaatggtggaaacctatgtccggtgcctaaatctttctgttagcgtcggagtagcactgtacgaggcagctagacaactcaactatgaacagctccattatcagccggagctcccggaagaagcgcaaggactattccctgccgaggacatttatgcatga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0506500, RefSeq:Os08g0506500