BGIOSGA001034

From RiceWiki
Revision as of 18:08, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA001034

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001034, complete gene.

LocusTag

OS01G0674100

Ensembl Transcript ID

BGIOSGA001034-TA

Ensembl Protein ID

BGIOSGA001034-PA

Length

7103

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30973907..30981009

Sequence Coding Region

30980770..30981009,30979952..30980155,30979579..30979767,30979243..30979502,30978297..30978380
,30978083..30978175,30977604..30977699,30976768..30976863,30976428..30976548
,30976046..30976322,30975251..30975374,30975137..30975156,30974871..30975027
,30974409..30974697,30974113..30974185,30973907..30973989

Genome Context

<gbrowseImage1> name=IndicaChromosome01:30973907..30981009 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:30973907..30981009 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGATACACCAACTAGTTCGGGGAAATCCGAAGTGAATTCATGTGAACCGAGTTGGTGGCCACCAGACTTTTTGGCAAAGATAGAATCTGTTTCCTTATCTAGAAAACAAAGTGTATTTTCTGATAAAGAACCTCGAAGCAATTTGCGATCCTCATCATGGAAGGCTTCTCAATTACTGTGGTCAACAGGGACTTATTCAGGGTTCATCCCTAATGGTTTCTACTCAATAATTCCGGATAAAAAGCTGAAGGAAAATTTCCCAACAATACCATCATTGGATGACCTTCAAACTCTTGAAGCAGATGGACTTAAGGTTGACATAATTATTGTGGACGTTGAGAGAGATAAGAAGCTTTTCATGTTGAAACAGCTTAGTGGCGCACTTGTGAAAGGATTAAACTCTAGTCCAGCTTTGGTGATAAAGAAAATAGCTGGCTTGGTTTTTGACTGCTTCAAGAGCCTAGATCCTGATGTAAGTCCTGCAAGATCTCCAACTGAAGATAATCATTTCTTTGGAAACAAAGGGTCACAACTTCTAGGGCAGATAAAGCATGGATCATGCCGACCCCGAGCTATCCTGTTTAAGGTTCTTGCAGATGCTGTTGGTCTTGAGAGTAAACTTGTAGTGGGTCTACCTGATGATGGTGGAGTTGGATTTGTGGATTCCTACAAACACATGTCCGTGGTTGTTTCACTGAACTCTATGGAGCTGCTAGTTGATCTTATGCGATTTCCAGGGCAATTAATCCCGTTCTCAGCCAAGGCTATCTTTATATCGCATATCTCTGCTGCTGGCGAGAGTGATTCAGCCGAAAATGACTCATGTGATTCCCCTCTTGAGCCCAACAGTCCTCTGTATGGATTATCAGATAAAGTTGAAGCTGAAGGAATTGAAGCTTCATCAAATCTATCTGGGCGTTCATTGCGCAATGTTATGTTGAGGTCAAGAACATTTTCCGAGGGGAAATTGAGCACATCATGCAGCGAGCCAAATATTGCAAATGCCTTTTGGAGGCGAAGCCAGAGAAGAGGAGTTGCTGAAGAACCTCGCGGTGCTAGTTCAAGCCCTGAGCATCCATTAATGAAGACAAGGGCAAGATCTATACTAGGTGGCGAGCAACATTCATTTCAGGAATATGCAGAAAGTGGAGTTACATCAAGATCAGATGGTCTAGGTGGTGCATCAACATCTAAAACTCGAAGAATACGGGGAAGAAGCATTAGCATCACGCCTGAGATTGGAGATGACATTGTGAGGGCGGTTCGGGCTATGAATGAAACACTAAAGCAAAATCGCCTCCAAAGGGACCATGTTAATGAAGGTTCACCCTCGTATGTTGGGGAGGACCAAAACAATGCAAGTGATTGCCCAAATAATGATGATACATCTGGAGGAGTTGTTGCTACCAACAATGGCCCAAGGAACCGAAATGGTTCCACTCAGAAAGCTATGTCATTGCCTTCTTCTCCTCATGAATATAGGGCGCAAATTTCTGAAACAATCAATCCTTGTGATTTTGTAAGTAAAGAAAAGATGGTATTGGCGTGGAACAAGGTTTTGCAGAGTTCCCCATTTCTCAATAAACCTTTATTGCCCTTTGAAGAGTGGAACATAGATTTCTCTGAGCTAACAATTGGCACAAGGGTTGGAATAGGATTCTTTGGAGAGGTTTTCCGTGGTATATGGAATGGCACTGATGTTGCTATCAAAGTATTTCTAGAGCAGGATCTGACAACTGAAAACATGGAGGATTTTTGCAATGAGATATATATCCTGAGCCGGCTGCGGCATCCAAATGTTATATTGTTTCTTGGGGCATGCATGGTACCACCACACTTGTCAATGGTAACAGAATATATGGAAATGGGATCGCTGTACTATCTCATCCATATGAGTGGTCAGAAAAAGAAGCTCAGTTGGCGTAGGAGGTTGAAAATTGTCCGTGATATCTGCAGGGGTTCGATGTGCATACACCGCATGAAGATAGTTCACAGGGACCTGAAAAGTGCAAATTGCCTGGTGAATAAGCATTGGACCGTCAAGATATGTGATTTCGGCCTTTCCCGAGTGATGACTGATAGTCCTATGACTGACAACTCCTCTGCTGGCACCCCAGAATGGATGGCCCCTGAGCTTATAAGGAACGAACCCTTTACAGAGAAATGTGATATTTTCAGCCTTGGTGTGATCATGTGGGAGCTATGCACGTTGAGTCGTCCTTGGGATGGGATCTCCCCAGTTCAAGTGGTATATACTGTTGCAAACGAAGGTTCACGGCTCGAGATTCCTGAAGGACCTCTTGGCAAGTTAATTGCAGATTGTTGGGCAGAGCCCCAAGATCGGCCGAGCTGTCAGGAGATCCTTACCCGCTTGCTCGACTGCGAATATGCCGTCAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MDDTPTSSGKSEVNSCEPSWWPPDFLAKIESVSLSRKQSVFSDKEPRSNLRSSSWKASQLLWSTGTYSGFIPNGFYSIIPDKKLKENFPTIPSLDDLQTLEADGLKVDIIIVDVERDKKLFMLKQLSGALVKGLNSSPALVIKKIAGLVFDCFKSLDPDVSPARSPTEDNHFFGNKGSQLLGQIKHGSCRPRAILFKVLADAVGLESKLVVGLPDDGGVGFVDSYKHMSVVVSLNSMELLVDLMRFPGQLIPFSAKAIFISHISAAGESDSAENDSCDSPLEPNSPLYGLSDKVEAEGIEASSNLSGRSLRNVMLRSRTFSEGKLSTSCSEPNIANAFWRRSQRRGVAEEPRGASSSPEHPLMKTRARSILGGEQHSFQEYAESGVTSRSDGLGGASTSKTRRIRGRSISITPEIGDDIVRAVRAMNETLKQNRLQRDHVNEGSPSYVGEDQNNASDCPNNDDTSGGVVATNNGPRNRNGSTQKAMSLPSSPHEYRAQISETINPCDFVSKEKMVLAWNKVLQSSPFLNKPLLPFEEWNIDFSELTIGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTTENMEDFCNEIYILSRLRHPNVILFLGACMVPPHLSMVTEYMEMGSLYYLIHMSGQKKKLSWRRRLKIVRDICRGSMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRVMTDSPMTDNSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLSRPWDGISPVQVVYTVANEGSRLEIPEGPLGKLIADCWAEPQDRPSCQEILTRLLDCEYAVS</aaseq>

Gene Sequence

<dnaseqindica>1..240#855..1058#1243..1431#1508..1767#2630..2713#2835..2927#3311..3406#4147..4242#4462..4582#4688..4964#5636..5759#5854..5873#5983..6139#6313..6601#6825..6897#7021..7103#ATGGACGATACACCAACTAGTTCGGGGAAATCCGAAGTGAATTCATGTGAACCGAGTTGGTGGCCACCAGACTTTTTGGCAAAGATAGAATCTGTTTCCTTATCTAGAAAACAAAGTGTATTTTCTGATAAAGAACCTCGAAGCAATTTGCGATCCTCATCATGGAAGGCTTCTCAATTACTGTGGTCAACAGGGACTTATTCAGGGTTCATCCCTAATGGTTTCTACTCAATAATTCCGGTAAGGAACTTTCTCTGAACAATTCTCTTTTGTTCCTTGGGGACATATTTTAGGAAAATAACCACCCTAGATTACCTGTGGCATGTCATAGGGCATTTTAGTTAGATGTTTGTTACTTCATGTAAGCCATGCATTTTCTGTAAAAGATGTTTAGTTCTCCAGCTAAATTGTTAACATTGGGCTTGATTTGCATATTTTATTGTTCTGGGCCTCCAGGTGTTTTTGTGGTTTTGTTTAAGTTAACAGTTTCAAAGATGGTCTATTCTACATAGTTTCCTTTCTTGCTATGTTGGGTAGATCTTGGTTAACATTTTTTGGTAGCTTAGCATTGTACACCATTTTATCATTGCCAAATCAGGAAACAGAACAAATTTATGTTTCAAGGAAAAATCTTTCAAATGCCTTAACTTCAATGAGGAAGCAAGTTCATATAGACTAGGGATCAAGGAAAGAAAAAAGAATATGCATGTTATGTTTTAGAATGGTTATCTTCTTCTCTTAATCATTAAATTCAGAGTTTTAGTGAAGTGTTGCTTTGTTTCATTTCTTTGTGAGCTTTGATATTCTCATTTTTGTTGTTATGAAGTTCTCTGTCCTGTGATGCATTCATACAGGATAAAAAGCTGAAGGAAAATTTCCCAACAATACCATCATTGGATGACCTTCAAACTCTTGAAGCAGATGGACTTAAGGTTGACATAATTATTGTGGACGTTGAGAGAGATAAGAAGCTTTTCATGTTGAAACAGCTTAGTGGCGCACTTGTGAAAGGATTAAACTCTAGTCCAGCTTTGGTGATAAAGAAAATAGCTGGCTTGGTAAGTTTTTCAGAAATTATAAAGTGGATATAGTTTTCTATTTCCCACATGTGCAATTTCCCACTATGAGCTCACCTTATGAATCATCAATGGTCAATATTATTTTAACATCTTTGGGCACTTTTGGTGCCTACAGATGTGCTGAATTTATTTGTCTTAAAACTTGCAAGTTATTCTGGAACAGGTTTTTGACTGCTTCAAGAGCCTAGATCCTGATGTAAGTCCTGCAAGATCTCCAACTGAAGATAATCATTTCTTTGGAAACAAAGGGTCACAACTTCTAGGGCAGATAAAGCATGGATCATGCCGACCCCGAGCTATCCTGTTTAAGGTTCTTGCAGATGCTGTTGGTCTTGAGAGTAAACTTGTAGTGGTATGTTGACTTCCTTTACATTCTTCTGCATATTCCATGTTCTTTATCGTAAATCAAGCATTCATGTCTTTCATAGGGTCTACCTGATGATGGTGGAGTTGGATTTGTGGATTCCTACAAACACATGTCCGTGGTTGTTTCACTGAACTCTATGGAGCTGCTAGTTGATCTTATGCGATTTCCAGGGCAATTAATCCCGTTCTCAGCCAAGGCTATCTTTATATCGCATATCTCTGCTGCTGGCGAGAGTGATTCAGCCGAAAATGACTCATGTGATTCCCCTCTTGAGCCCAACAGTCCTCTGTATGGATTATCAGATAAAGTTGAAGCTGAAGGGTATGAGTATATGTCAAATTTCTCCTCTTAGTTCTCTGATTCGGTTCTTCTCGACCTTTTCCAATATTGTAATTTATCCATTGTTGACTATGTTGATAGTTAATGATTCGATCATTGGAGAAAATAATGAATGTAATTGGTGATGGTCCATAGTAACATTTTTTTTTGCGAGGGTCCATAGTAACATTTTAGTTTCCATGTTGAATGTCTAGCAGAATACTTTAGAAAGAAAACAAGTCAACCATGGCTGAACTGCTATCTTAATTATTGGAAAAACAACAGATCCATATTTTTTTCAAGGCAATTTTCCACTATACTGAATAGTGATCATTGTCATTTGCGTGCATTATTGGGCTGGTAGAAGTGCTTCTAAATACAAAGTCGTGTAATAAAACTATAACATCAAATATTCCTCTAGTGCTATAACATCAAGTATTCTTCTAGCATATGTGCATTTGTTTCATTTAGGAAAAAAAATGTTTGTAAGATATGTTGATATATGGCCCTCACTTGTTTTAGGTGGTTGATTGGAACCTTATTGATAGTTTACTGGCTACATAGGTCAATCTTTACATCAGTGAAATAAAGGGAAATGTATAGAACATTTGACTCTGAGAATTTTTTGTTGCCATGATTTAAGTGTCAACATCAAACATATACAGAAATTGAACAGAACAAAATCACTTATGGATATTTCAAGTAGTACAACTGTGGAAAGTAGTAGAATTAAAAAATCAGACAGGTCCTGTATTTTATTTATTTCTTTTCTTGCTGACTTCCAATTTTAACATTAGTTTGATAGAACAATCTAGAGTTTTTAATTTGAGCAAGATGAAAATTTCCCATCTCAATCTCAGTGCAGAATTGAAGCTTCATCAAATCTATCTGGGCGTTCATTGCGCAATGTTATGTTGAGGTCAAGAACATTTTCCGAGGGGAAATTGAGGTAGCACATAACTGATATAATAGATTGCACCGCAATGGTCTGATACTTGTGTCAATAGTTTTGTCTGCCTTGTTCAGTGCATTTTCTAAGAAGGTACTGGTTGCTTGATTCTTTGAAACAGCACATCATGCAGCGAGCCAAATATTGCAAATGCCTTTTGGAGGCGAAGCCAGAGAAGAGGAGTTGCTGAAGAACCTCGCGGTGCTAGTTCAAGGTATCCTCTCAAATCTAGTTATTGATTACGCTAACCATATTTTTAAAATCCTTGTATTGTTTTCGGTTACACTGCTCATAACAGATTCTTGTTTTTAGGTTTCAAAGAGTTCTTTCAGAGGAGAAATGTTTTTATTTTGGGGGTGATATGCAAATGTACTTAACTACTTATATGCCTCTATGGAAATAATCACTAATATTACCAGAATTATTACATTGTAGTTGTGGTTACTTTCACGATTGTAGTTTGTTTCTTTCCTGTGTTTCGGCTAGTAGTGAGCAGTAACGTAACATGTCTTTCTTTTGTTTCATTGCCTTCCTACCTGTTTCATGTGTTGCTGCTATTCTCATGCTCTATGTTTCTCCTTTTGTTTTCTGGTGTAGCCCTGAGCATCCATTAATGAAGACAAGGGCAAGATCTATACTAGGTGGCGAGCAACATTCATTTCAGGAATATGCAGAAAGTGGAGTTACATCAAGGTTTGACAACTGATCTTTTTATTTTTCTGAAGTTTGCATGTTTTCCTCAATTCTTTTCTGTGAAACAATATTGTTAAAAGTGCATAAATTCTCCACTGCTGTCTTCAGTTTACTGTCATATCCCTTTTGTTTTTCTTTTAGCTAGGTGCAATTTTATATATTTCAATGTTACAAATGTAAGTCTTCCACATAATTTTGATCGAAATCTACTTAATTTTTGGGTTATTCTTCATAGTGGCAAACCATTGAGAGCAGATTTTGTTACATATCTGATGTCCATTCACGTCATACGTTAGCTTTCTGCCCAGCATTCTGGGATAAACATGTAACAGGAATAAATTCTTGGATGTGTAACTGATATTTTGGACATTGATAAGAGTGTATAAAGTACAACCTTGGCCACTAATTGTTATAATATAATTGTAAACTTGATAAAACTATAACATTATGAAAATGTTTTTCATGACAAATCTATGCATATGTACATACATCCAATCTTAACATTTAAAAATATATTTATATTCAGTTTTGAAATTGACTTCATACATGTCCAAAACATGTTTGTGACCACAGGGAATAACATTTTTCAATGACTTAGCGTGTGAGTTGCTATTGATACTTAACACTTACTTACCCTTTTCATGGGTCAAACATTTGTCTTGAACATGTTTCAACTCAGTTTCTTTTACCCTTTTTGTGAACCTTCTTATTCATTTGACAAGCCAAGAACACACTTGCAGATCAGATGGTCTAGGTGGTGCATCAACATCTAAAACTCGAAGAATACGGGGAAGAAGCATTAGCATCACGCCTGAGATTGGAGATGACATTGTGAGGTAATTCTTATTTTGAACTATCCTGACGATATTTGAGATGGCATATTGTTTTCAAAGTTGTATTGTATAGCTGTGCTTGGTGCTTTCAACCAAAATATATTGATAATTTTCTTTTAGTTGTATTTTGATTCTAGATATCCTTAAGCATTTGTCTGTATTTTGCTAGATATCCTCAAGGAGTATCAGGAATTCATTGTTTCAATCTTAAATCTTTGACAGGGCGGTTCGGGCTATGAATGAAACACTAAAGCAAAATCGCCTCCAAAGGGACCATGTTAATGAAGGTTCACCCTCGTATGTTGGGGAGGACCAAAACAATGCAAGTGATTGCCCAAATAATGTATGTTCCTGCAAATTCCATTGTTTAATCTTATCTATATTGGTTCTTTATTCCTTGGGAGTTGGAAATATGACTTATTTTGCTCATAATTTCATTTCAATTTAGGATGATACATCTGGAGGAGTTGTTGCTACCAACAATGGCCCAAGGAACCGAAATGGTTCCACTCAGAAAGCTATGTCATTGCCTTCTTCTCCTCATGAATATAGGGCGCAAATTTCTGAAACAATCAATCCTTGTGATTTTGTAAGTAAAGAAAAGATGGTATTGGCGTGGAACAAGGTTTTGCAGAGTTCCCCATTTCTCAATAAACCTTTATTGCCCTTTGAAGAGTGGAACATAGATTTCTCTGAGCTAACAATTGGCACAAGGGTTGGAATAGGCAAGTTACTTGAACTTCCTCAGCCAAAGTTACCGAAGTCTATTGTAAACTGTCAGCCTACCTGCTATGCTTGTGTTCTTGACTCTTCATCTTGTTGCTACTTTTGCTATGCTGCTTTCTCTTTCTAGCATGTTTTCAAAATGAACAAAAACTAAACACAACATGGGTAGTTATTTTCTCCTTAGCTATTACCAACTTCCTGTAAGAATTAGATCCATCAAACTTGGTGTTGAAAAATGATCCAATAAATTCAATCTCCCATAAGATATGACTTGCTATTGTTATTTGTTTCCATATCCACACTTTATTGAATATGTTTGGTTCAGTCAAAATTTACTAACACAAAAAAATTATATATTGGATACCGCAACTGCAAAGTTGAACAGCGATTTACTTTCTGAGGATCATGATGTCACCAACTTTTGATTCTATCATTCTTTAGACCATTTAATGGAGCTTACTCATCCATGGTATTGATAAGCATTATGAATACGAATGTAGGAATATTAATGGGGATGATGCTAAACATGTTATGCCTGAACCATTTGATATGTTGTTTCATACTTCAATGTGTGCTTTTATTTTTGGAAAGCTTTCTTATGAAAATTTTCCTTTCTTGTTTGCCTGTCATGTTTTAACATTTTTGTCACCTTGTCAAATTACTTCATCAGGATTCTTTGGAGAGGTTTTCCGTGGTATATGGAATGGCACTGATGTTGCTATCAAAGTATTTCTAGAGCAGGATCTGACAACTGAAAACATGGAGGATTTTTGCAATGAGATATATATCCTGAGGTACCTGTACTATGCTTGCTTCTGTATTATTGGCAGCCTTCTTTTTAATCATAATATGCACACTAACTTTGAGAACTTCACAATTTCCTTTCAGCCGGCTGCGGCATCCAAATGGTAAGGACTCACTTTGATTAAGTCAAACTACAATACTCAGCAGCTCTGCACTAGATATCATGCAACTGCCATAAATCACGAGTTTCTAAAGCAAATTCCATATCTGTAGTTATATTGTTTCTTGGGGCATGCATGGTACCACCACACTTGTCAATGGTAACAGAATATATGGAAATGGGATCGCTGTACTATCTCATCCATATGAGTGGTCAGAAAAAGAAGCTCAGTTGGCGTAGGAGGTTGAAAATTGTCCGTGATATCTGCAGGTTAAATCTTTCTCATTGTACAATAACTATTACTACTATATATTCCTATTAGCTGGTATTACATATAAACTTTCAGAAGATTCTGATATAATTCTCTTGTCGTGCGGACATCATCTCATAGCCCTCCTTTAGCATTCATTCTCATCTGACAAATTGTTTTGTTTACTTAAAAGGGGTTCGATGTGCATACACCGCATGAAGATAGTTCACAGGGACCTGAAAAGTGCAAATTGCCTGGTGAATAAGCATTGGACCGTCAAGATATGTGATTTCGGCCTTTCCCGAGTGATGACTGATAGTCCTATGACTGACAACTCCTCTGCTGGCACCCCAGAATGGATGGCCCCTGAGCTTATAAGGAACGAACCCTTTACAGAGAAATGTGATATTTTCAGCCTTGGTGTGATCATGTGGGAGCTATGCACGTTGAGTCGTCCTTGGGATGGGATCTCCCCAGTTCAAGTAAGCACCCATCCACTTTGTATCAAAACAGTTGCGTCATGAATGATAGCTGATAAAAGTTATATTCCCTGAAGTTTATGATGAATCTTTCTCTCTAGCGACATGATCAGTTAAAAAATTGCATGCATCATGTTTCCAGTTTGTTGATGTACTTATATATGGCCAACACAGTTCCTTTGACATGGCATTGTTGCCTGAACTTCATGAATTTGGTCCACTGTAGGTGGTATATACTGTTGCAAACGAAGGTTCACGGCTCGAGATTCCTGAAGGACCTCTTGGCAAGTTAATTGCAGGTAATGGTGCTTTTATATGACAGATGTTTCAATTGGGGTATTCCAGTGTTCAGAGTCATGTCGCACCAACATGCATCGGCTTCAGTTATAGCTTAGCAAAGTGTTTGCTTTTGTTTGATGCAGATTGTTGGGCAGAGCCCCAAGATCGGCCGAGCTGTCAGGAGATCCTTACCCGCTTGCTCGACTGCGAATATGCCGTCAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001034