Os08g0509500

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Revision as of 13:07, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0509500| Description = D111/G-patch domain containing protein| Version = NM_001068738.1 GI:115477213 GeneID:4345997| Length = 3571 bp| Def...")
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Gene Name

Os08g0509500

Description

D111/G-patch domain containing protein

Version

NM_001068738.1 GI:115477213 GeneID:4345997

Length

3571 bp

Definition

Oryza sativa Japonica Group Os08g0509500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25358063..25361633

Sequence Coding Region

25358122..25358739,25360555..25360620,25360828..25360887

Expression

GEO Profiles:Os08g0509500

Genome Context

<gbrowseImage1> name=NC_008401:25358063..25361633 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25358063..25361633 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagccggacgccgccgacgacgactacatgggggacctgtcccacttcctcccgccgccgaccccttcctccccgtcgaggagcctcgggcggaggaggcaaccgccggcgcagcaggcgcaggggcaagggaagcgcgcgaagggggtggtgccatggcaggagcggcggcggcgggatcgggagcggaagcagcgggaggaggacgagcggacgatggccgggctcgcggaggccataccggagaccaacgtgggtttcaggctgctgaagcggatggggtacgaccccgcggccggtggcggcgcgggcgccgagccggtgggaatcgagatccgccgctcccgtgcggggcttggggcggagcctgctgtatcggtggcgccgccgcagccgtcggcggaggtggcggagggggagaggaggcgggtggaggagatggcggtggagttgagggcgaggcaaagcacgcagtggaggaaccggagggtggtgtgggattaccggaaggctgaagccgcgctcgcgcagctggagaatcgggaggctgcgccgccaccgccggagggggaggagaaggctgaagaggaggaagaggaggtgatcactgaagaggatttgcaaaatatattggctaagctgcgcgatgaacactactattgcctttattgcggttgcaagtatgaatcagcagaagcattggcaaatgaatgtcctgggccaaatgaagatgaccattaa</cdnaseq>

Protein Sequence

<aaseq>MEPDAADDDYMGDLSHFLPPPTPSSPSRSLGRRRQPPAQQAQGQ GKRAKGVVPWQERRRRDRERKQREEDERTMAGLAEAIPETNVGFRLLKRMGYDPAAGG GAGAEPVGIEIRRSRAGLGAEPAVSVAPPQPSAEVAEGERRRVEEMAVELRARQSTQW RNRRVVWDYRKAEAALAQLENREAAPPPPEGEEKAEEEEEEVITEEDLQNILAKLRDE HYYCLYCGCKYESAEALANECPGPNEDDH</aaseq>

Gene Sequence

<dnaseqindica>60..677#2493..2558#2766..2825#ggcccatctccttccacaccgggacgccggccgccgccgctgccgccgccccgcgcgccatggagccggacgccgccgacgacgactacatgggggacctgtcccacttcctcccgccgccgaccccttcctccccgtcgaggagcctcgggcggaggaggcaaccgccggcgcagcaggcgcaggggcaagggaagcgcgcgaagggggtggtgccatggcaggagcggcggcggcgggatcgggagcggaagcagcgggaggaggacgagcggacgatggccgggctcgcggaggccataccggagaccaacgtgggtttcaggctgctgaagcggatggggtacgaccccgcggccggtggcggcgcgggcgccgagccggtgggaatcgagatccgccgctcccgtgcggggcttggggcggagcctgctgtatcggtggcgccgccgcagccgtcggcggaggtggcggagggggagaggaggcgggtggaggagatggcggtggagttgagggcgaggcaaagcacgcagtggaggaaccggagggtggtgtgggattaccggaaggctgaagccgcgctcgcgcagctggagaatcgggaggctgcgccgccaccgccggagggggaggagaaggctgaagaggaggaagaggaggtgatcactgaagaggtaattgttcgttgttacttccaattctcaccaattttttttatctgttactcaaattcaatcattctgttcctgaattacgctttgttgaaacatttcaaacaaacatggcgcatattatagtcatcttaattagaaaattggaacctgggtgaaggtttcgaaggttgttgcgcgatgccatttgccaactaaactgtcaattgattttggcgctgaagcatagaaactaccgcaggcatgatttattggatgaaatgtggaatatgatttacggaatagaccactatactgatcttatcatcttaagcttcaatatgggtcagtcacaagcacacaacttcaatactagtagttactacttactaccccgtgctttgctgcgggcattggggatttcaaaatagccaaattgaagatagtcacagtaataatatgttgcaaatcattttatagcctgctaagaaatagcttgcaaacaacacaatgataagtcacttctttgctggccaaatggtaaggatgcttgactatgtcaaatactcctagaatacactgaaagagagccagtaacaaaacactgatatgattccagtgaataaaatttaattctaagaaattataattatcctaacagaactgatgggaactgaaagggaaccatttatctattcttgagtgaaatatgaattactaataaatagcagtgtaaaaccttttgtgttcaataacggcaaaaaacatcatcgtcctaacgtaatttgcaattagatatataataaaataatatatgtttttagttcattacatgctatatgaaacatgtgaaaataatgattaaccacttggaagtcatgcacagaagaagaatattcctgcaaagatacttgataacatattttcagatatatagcagtgcaccgtctttacgtagttctaaatctgcaacgagcaagcaagtgtggttggcatctttctaggtgaaaattgacgacagtatcataacatcactctggctttcgtcaaacaaattttaagcatagttagtgaatgattccaggaccatacccacaacaccaataactgaactagcacctatcttaggttctgattgtacagaacaattaaaggataattaatatatgacaaagtactgtaccaatagaaaagtttcaatggtacagactgaacacatacacatgaggatgcgagggatgatgaccaggaagcgttgctgcttggttggaacctgtgcaatatgattgcagagcagatgtaacaactgggacgtgaccaagtttgggccttgttatttctttctgtaggcaagctaatggtccaatgtatgtaggcctgtcaaagataatggggatccaacaatttatcaacacggaacgattgatccaatggttcaaatgtgctgctgacatgagtaaatgtggagcagctttttagaaataaatgctgctagtgggttgtaactatatagaaataaaggatatattgcataggaccttaggcatttcatcacaattttccattgtgacgagcatgataactggtattagtaacgcaattgcctccgtgcctatttggttcctatgaagggctaaccgtaaatgcttaccagctattggttacacatattatgttgtgacaatggaaatagctcgaactttgaattatgaatatacttatgtttgcacattctttccttcatattcttgtctagacttccttttttatctgagaaatcttatgcaagactgcaaattttgctgaaaggacgagattgacctgtgtttattcttgcaggatttgcaaaatatattggctaagctgcgcgatgaacactactattgcctttattgcggttgcaaggtcagcttcattctggaaataagcttcagctctacatagtactagtgtttatgtgcatgcccctactgcctactggacggcattactgttgggaatctgtgattaccatatcatgttggatctttggttttctctgcattttaaatagggtgatcttttatagcatcttccatgcttttaaaattggacgcattgtccccttttcagtatgaatcagcagaagcattggcaaatgaatgtcctgggccaaatgaagatgaccattaattcgctgtgtctggggcaacaaagaatggtccttgttacaacaggtgatgattctgtaagtgcaggaatcttgttcagtaatgatttgcatactgcgttggattcctgatgcactggagcttcagaatcttgtccttatcatacatgttcagttaaggggtatttgtagactgtagtactaatggtctaatattttgatgaattaactgtatcatgcaggatttgcaagttgctgtaaacgatattttgggacctatactgcgaatcacctttcacatttcagtatcacatctcaatgttagaaatgataattctcttgcggcagcttaaagctacaagggtggaactggaaagcttcaggaagagtttacagttctgcatatggtatgctctgctcctccatgtagaaggcttcaaaggagcccttgctacagctcttgaaaagtccaaatcaaggtgcctctcctcacagtgaaaaagagtcgtgtcaatggaacaagtgatctgcgacatatgataatgataagcagatggcgccaaagcaattatacatttctgttttccaatcacggtgataactgttcaagttggtagtactgtgtttaggatggcactgatatttttgattcattctagcaatacatcatacacctgttgctgggatctatcttcaatgcaatgatggttttacaactgtgtcaaatcttgcatgtgacattaagatccataatcactgtttgctgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0509500, RefSeq:Os08g0509500