Os08g0512400
| Gene Name |
Os08g0512400 |
|---|---|
| Description |
HMG-I and HMG-Y, DNA-binding domain containing protein |
| Version |
NM_001068753.1 GI:115477243 GeneID:4346014 |
| Length |
4141 bp |
| Definition |
Oryza sativa Japonica Group Os08g0512400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:25492909..25497049 |
| Sequence Coding Region |
25493310..25493549,25493876..25494037,25494266..25494397,25495156..25495208,25495712..25495940 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:25492909..25497049 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:25492909..25497049 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>gctctcatcggtggatacgaatttccgcggctttgtgttagagtttttggtgatacaagaaacaagcgcgggcggccgaggaagtacggccccgacgggtccatgtcgctggggttggtgacctcgccgacggccgccgcgtcgacgccggtggcgcagggcgtcccagggccgttctcgccgacgcagccgaagccgccggcgagcttcttgtcgtcggggtggccggacggggtgaagaagcgtggccggcccaagggttctaccaacaagccgcgcatcgacgccgtcggatcggcgggagttggatttacaccacacgttattacagttctagctggagaggatgtgtctgcaaagattatgtcgtttgctcagcatggaaatcgtgcggtttgtgttctttcagcaaatggtgccatatcaaatgtaacacttcgccaaactgctacttcaggtggaacagtaacatatgagggccgattcgagatactatcgctgtctggctctttccttctaaccgaccatggaggccagcgtagtcgaactgggggactcagtgtttcactggctggtcctgatggtcgtctgttgggaggcggtgttgccggacttctcatagcagctactccagtccagattgtggttggaagcttcaattctgaagggaaaaaggagccaaagcagcatgctcattcagaacccgcatccgcgccatcgaaagccgtgccgacggccgggatgggacccaacagcccaccttcaagaggcacattgagtgaatcctcaggtggagctggaagcccattgcatccaggcattgctcctcccagcagcaacagccagccgccattcttgtctagcatgccatggaaatga</cdnaseq> |
| Protein Sequence |
<aaseq>ALIGGYEFPRLCVRVFGDTRNKRGRPRKYGPDGSMSLGLVTSPT AAASTPVAQGVPGPFSPTQPKPPASFLSSGWPDGVKKRGRPKGSTNKPRIDAVGSAGV GFTPHVITVLAGEDVSAKIMSFAQHGNRAVCVLSANGAISNVTLRQTATSGGTVTYEG RFEILSLSGSFLLTDHGGQRSRTGGLSVSLAGPDGRLLGGGVAGLLIAATPVQIVVGS FNSEGKKEPKQHAHSEPASAPSKAVPTAGMGPNSPPSRGTLSESSGGAGSPLHPGIAP PSSNSQPPFLSSMPWK</aaseq> |
| Gene Sequence |
<dnaseqindica>3501..3740#3013..3174#2653..2784#1842..1894#1110..1338#786..848#gtgctttacttaccagctgcctgttttttcttctctttccttgaaaaaaaaaaccatctttatttttgttaattagggaaaagaaagagtgcatgtgaagtcaggagtaggagaggttggaaaaaaatagggggaaaaaaaggagatatatattgatgaaggatagttgagatataagcaagaatttgtgagaggctagtaggtaaccaaaatctctgaacctgttctttctcatgtgtgttctactggagtgagtttgtgacatgttttcctgctcctgagcttcatattttttggaggagtgtgaaagtgtgcttctttgttttcttttcattttgtggaaataatttttttccctcttgagattttttttctctctctctctctgcaactgttaggtctgaaactgtggcaatttattgcgttttgtcgcctgcaaaatccggcgaaaagaatgagatctgcaattccggtgctccgtttttgataaatcctaagccaaaagcctagtttttttttaactccatccccctttcttgagcttttcaccatttcccatctccaatttcatcttcttccttcggataatttttcttttatttgtgttttgttttccatttcgtttccttcttctcttctacctcgctctttcttctgtaaaaatctctgggtttcttgcgaggaagatctctttctcttctctctttcagctctgagcagctagggttttatgggattttgcaggttcccaaatccctagccctaatctcctcacgtgctcgtgagctctcatcggtggatacgaatttccgcggctttgtgttagagtttttggtgatacaagaaacgtgttcttggccatggaggtgaggtcggagcaagggctaatggcggggagggatctgttcggcatgccgaagagcccgccggcggcggccgcggcgccgccgcagagcgtgcgcatggcgtacacctcggacggcaccccggtgttcgccccggtgagcgccgcggtctcggcgccgccgggttaccagccgggtggcgccgccggtggcaatggcgcggcggcgctggcggactccggcggggagcccgtggccaagaagaagcgcgggcggccgaggaagtacggccccgacgggtccatgtcgctggggttggtgacctcgccgacggccgccgcgtcgacgccggtggcgcagggcgtcccagggccgttctcgccgacgcagccgaagccgccggcgagcttcttgtcgtcggggtggccggacggggtgaagaagcgtggccggcccaagggttctaccaacaagccgcgcatcgacgccgtcggtaaaatctccatccccattaacatctccatatgctcaaagttaattaggttttgcaccttgctatggtcgagtaggtttttgttgataagaaattgagggggaaaatgactttttttgctttgcgaataattgttctagaaatcattgagaatatacttgtttacaaacagggctcaatgtggcatattggcaccgcttagagtttagatccactgcatagtttgaagaatgtactactagttcatagggccaaactaaaatattcttttgacaagtttatcttccattcattgagtgattctagtgtttatgtctagtcgacgcagtttaatgtggagttgtttttctgtcaaattattgagcatctgctttattctattctaaagttgtattgtatccatccttttgacctattaatgtgaaatcgatgtgtgttgacttcatctttgttgaagtttctatctttcgcataattaatcctaatttggagttctcttgtaggatcggcgggagttggatttacaccacacgttattacagttctagctggagaggtatagtatgctatcttacacttggtcttttggttgctcttggaatgtgtattcagatttttttttatttgcataaaagtattcagattttcttttctgggctctgtttgcatgcccctaatttacctttggaatttccagtttcactttgatggtggtgtttctgtttttctctctgaagtttggttctaatattttggaagctcaagcttgtaacgattttgtgctaagggtagtgtcaatgattgtttttagtaggaaagatactgcaaatctgcaataaattgatgttaagcatcacattgtgataatgtgagtgtagggtactttggcacaaaatcatgtattgactactttggtacattgagattatgttcaatcctgtatttttagttttatcatcctcacatttcgggcctttgaatcttattcaatcttcatcgtcttagataaactatatcaaattaccatttaccattacctatttcattggacacaaagtcctgtctgaaaatcaaatcgatgtaatcttggttatgttttgatgtgcttctttagaaatattatagtttgaacataatccatgtttttttttatggttccttatgatgctgtttttgctctgagtaaattctttcattctatggataacttagcgaatagtgatgctacagtgccattttgtcttggtgagtaaaatatgttgacaaggtttatacagaactaatgaaaaaaaaaatcatgatcccttctttcaggatgtgtctgcaaagattatgtcgtttgctcagcatggaaatcgtgcggtttgtgttctttcagcaaatggtgccatatcaaatgtaacacttcgccaaactgctacttcaggtggaacagtaacatatgaggtttgtactattatccagtagaaattaacacggtataaaggcaatcctctctgcaaacagataccatactgttagctggtgctatcaccattcatgtgattttagatgaaaaattatgcataaggcgcataaatttacagccaagttgcagatatgctgtttattagcaatgtacaatatgctgatcacgaatgttgattgtgatacctccttgatttctcacaacagggccgattcgagatactatcgctgtctggctctttccttctaaccgaccatggaggccagcgtagtcgaactgggggactcagtgtttcactggctggtcctgatggtcgtctgttgggaggcggtgttgccggacttctcatagcagctactccagtccaggtatggttttatcccctgcaatggcccccaaccttatttattggattctgtatgtatatcttgctgtacaacatctgcttgatattcttgaaatcagctgcattttcccccatcttctcccagttatcaaaaatgttttttttccctgaactagattcactgtcctgcaagtagttttacatcactgcagcttttacctcaatttttttttttaaaaaaagcacataatgatatgctccaaccatgatttgctccttcgttgtttgcttaactgaattttactagactaatattctgattatcactattactcctacaatctgtagattgtggttggaagcttcaattctgaagggaaaaaggagccaaagcagcatgctcattcagaacccgcatccgcgccatcgaaagccgtgccgacggccgggatgggacccaacagcccaccttcaagaggcacattgagtgaatcctcaggtggagctggaagcccattgcatccaggcattgctcctcccagcagcaacagccagccgccattcttgtctagcatgccatggaaatgaaatgagaccttttcatccttcaccaaacctggactctgaatctctgatagactttgtcgatgaactgcatcttctgccagaaagtagtagcaaccgttgccacacgttttctctaactagctcctatgatgtagtgtaaatctgaagtttaattaggggagaatttgtagctggtaagtgtagctgtcgtgtaggtttcaccctggatttattatgtattaggtaggtagtggtatcttgagagacatatgatcatgttatcctaatgtcctatatgcaatgttatcaaagattattgttattattatggcctctagttacatcaaattttctcatgggttcatgcatttcaatggatgaaaaaaaaagaaatagaaaaaggcttgcctagaatgaattgc</dnaseqindica> |
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