Os08g0512500

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Revision as of 13:07, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0512500| Description = Similar to Thylakoid lumen protein, chloroplast| Version = NM_001068754.1 GI:115477245 GeneID:4346015| Length = 2472...")
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Gene Name

Os08g0512500

Description

Similar to Thylakoid lumen protein, chloroplast

Version

NM_001068754.1 GI:115477245 GeneID:4346015

Length

2472 bp

Definition

Oryza sativa Japonica Group Os08g0512500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25504187..25506658

Sequence Coding Region

25504244..25504371,25504481..25504578,25504689..25504754,25505161..25505241,25505370..25505452
,25505612..25505687,25505823..25505941,25506224..25506274,25506381..25506407

Expression

GEO Profiles:Os08g0512500

Genome Context

<gbrowseImage1> name=NC_008401:25504187..25506658 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25504187..25506658 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgccgccgtgaccaccaccaccaccgccacaaccacccatctctgccgtggcctctcctcctcctccgccgccgccgccaagccgcggcgagcgacgacgctcagatgcggcgccgctgctcgggtggaagggctggggcggagggaggcgttgctcggcgtgctcctctccacggcgacggcggcgtccgcgcccgtcgccgccgtggccgcgaccgccgagttgcaggaggggttccgcacgtacgaggatgaggccaacaagttcagcatcgccattccacaagactggctgatcggcgccggcgaggtcagcggcttcaagtccgtcacggcgttctaccctgaccaagtcgccgactccaatgtcagcgtagccatcaccggaatcggccccgatttcaccagcctcaagtcgttcggcgacgtcgacgccttcgcagagaccctggtgaacggcctggacaggagctggaaacggccgccgggggtcgccgcgaagctcatcaactccagggcagccaacgggttttactacatcgagtacacgctgcagaaccccggcgagcagcgccggcacattgtctcggccatcgggatggcgttcaacggctggtacaaccggctctacacggtgacaggccagtacatcgatgaggacggggatgtagacaagtacagggctcagatagagaagtgtgttcagtcattcaggttcacatga</cdnaseq>

Protein Sequence

<aaseq>MAAAVTTTTTATTTHLCRGLSSSSAAAAKPRRATTLRCGAAARV EGLGRREALLGVLLSTATAASAPVAAVAATAELQEGFRTYEDEANKFSIAIPQDWLIG AGEVSGFKSVTAFYPDQVADSNVSVAITGIGPDFTSLKSFGDVDAFAETLVNGLDRSW KRPPGVAAKLINSRAANGFYYIEYTLQNPGEQRRHIVSAIGMAFNGWYNRLYTVTGQY IDEDGDVDKYRAQIEKCVQSFRFT</aaseq>

Gene Sequence

<dnaseqindica>58..185#295..392#503..568#975..1055#1184..1266#1426..1501#1637..1755#2038..2088#2195..2221#gcaaggcaggcagcagcgaccagacgaagcagagagagcgcccgcgccgcgccggccatggctgccgccgtgaccaccaccaccaccgccacaaccacccatctctgccgtggcctctcctcctcctccgccgccgccgccaagccgcggcgagcgacgacgctcagatgcggcgccgctgctcggtacgcatccttgacacacgcatatttccagttcgtccgcgccgcgcagattgattggtgattaaactggttggctacctgccgttgtggaattgtggttgtcgatcagggtggaagggctggggcggagggaggcgttgctcggcgtgctcctctccacggcgacggcggcgtccgcgcccgtcgccgccgtggccgcgaccgccggtaatgcgacacctatcacaagccactgcaatcttatccaacgttttcttgtttggcctctgctggttgattccgtgcttatcctgtggagctttttgtgtgttgccaagagttgcaggaggggttccgcacgtacgaggatgaggccaacaagttcagcatcgccattccacaaggtgatttagcttagggcgcgttctgaatgaatagctaattgagcttagttacttctccttttcttttgtttgcacgcttttcaaacggttaacgccgtgaaaaatttctatgtagaatgtgctttaaaagatgcagatctctaccccaatgtcttgtgttcaatccccgacacgctaacaatttctttttaaaataatgttttgagggatgtattttccttcaaatatagtttttaaggtgctttaaaaaatgaaacagatatgttaatatatttttcgttttacgtgcatctaatcagctagaattgtactagaaaagaacacgccctttgttattcttgagctcacagaactgggaggcgagcagagctgagcagctagatagttctcttccttgttggtgcagactggctgatcggcgccggcgaggtcagcggcttcaagtccgtcacggcgttctaccctgaccaagtcgccgactccaatggtatgcagatgcacacgaatccaccgtcgcgtcgcgtcgtgctgcgtctccaagattgaaatcttttgttttttctcctctgggaattcacgagctttttctgcatcttgatgtctgcctctgatcagtcagcgtagccatcaccggaatcggccccgatttcaccagcctcaagtcgttcggcgacgtcgacgccttcgcagagaccctggtacgcatccactcccacttcttgccggtttggctatcccaaaactgtaatgtacatagcaaaattcagacacagcaacatgcttccaaaattcagacataagaatagcagcagtagtagctcgcactgtctcacttggtgctgtggctgcaagagcaggtgaacggcctggacaggagctggaaacggccgccgggggtcgccgcgaagctcatcaactccagggcagccaacggtgagcacaatgacatcatatgacacaatgtttgcactttgcagcatttgtgtgtgccttgctgcctgcatactgatgatcaatgatcgatcctgacatacatggggtttgcttactgctgatctgcgtgtgcagggttttactacatcgagtacacgctgcagaaccccggcgagcagcgccggcacattgtctcggccatcgggatggcgttcaacggctggtacaaccggctctacacggtgacaggccaggtgagcaacaacaatgcactatcaggtttcaactgatcattgggcctgtttagggagcttaagattctgaaaatctgaaaaaactaggaaacacagcttctggcttctacttcattttttggattctaacttcttagaatctgaaccaaaaactgtactgtttgggagaagctgcaacagttagaaactccccccaaacatgccaattgtgtgatcaacgaacattgattttagtagcaaagattttcttctcatatgctgaacttggtgggtgtctcgcagtacatcgatgaggacggggatgtagacaagtacagggctcagatagagaaggtgagatcttggactgaacatctggaaccagcagatatcttgctcatcttgcaattcttttgcctgtcgtttgctggatggatcactgaaggtttttcatttgcagtgtgttcagtcattcaggttcacatgaaagaggagcatcctacacaacatccaacaaggcgaggacgaaaaacattttgtaaaccaacgtatttcgttataattgtaaatcaatcagtatattcatgtcatcagttcaaccaactaaatgtacaccaattgttccgagattttgacgatgcggccttgccgaggccaacatgagctaattatgttgtggcaagtcataagcattgttttctatgcatttttaagggagaaaaaacaggtgtatttgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0512500, RefSeq:Os08g0512500