Os09g0439700

From RiceWiki
Revision as of 07:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0439700| Description = Lung seven transmembrane receptor family protein| Version = NM_001069812.1 GI:115479366 GeneID:4347168| Length = 401...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0439700

Description

Lung seven transmembrane receptor family protein

Version

NM_001069812.1 GI:115479366 GeneID:4347168

Length

4019 bp

Definition

Oryza sativa Japonica Group Os09g0439700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16954508..16958526

Sequence Coding Region

16954874..16955051,16955409..16955545,16955738..16955833,16956020..16956941,16958222..16958487

Expression

GEO Profiles:Os09g0439700

Genome Context

<gbrowseImage1> name=NC_008402:16954508..16958526 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:16954508..16958526 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgtgtcggcggcggccgcccgcctgcaccacctcctgagcctctgcgtggccgtcgctgggctgctgctgatgctgctcggcggcggggaggcgtcggtgcacgagtaccgcgggctcggcttcctcaacaagggcaatgcgttcatcctccacgccggcagcgagggcctctacgcgccgtcctcccccgcgaatgcgacgaccgcggaggacgacgaggatgccgccgccgccgccgtggccgacgccttcatccgatttgacaagattacgtttaggagaccaaaggatgctgcaaaggaaactggttcagcaatggttcagatacttgtttttgagatagaagatcgtgagatgattggtggatcagcatatggaggtcagaaagctatttgttgtacctcagatcttgcgaagttaggagcttgcacggaaggttctgtcatctatcggccatcacaggtgaatcctggctggccacagttgcttttttcatcttttgatggaagtgacacgattgcaacactaccttcaaggatcattcctataacaaaaaccgggatgtacaatatgtacttcatacactgtgatccatcacttgctggtctggagatagaggggcaaaccgtatggaaaaatcctactgggtatcttcctggtcggatggcacctcttaagaacttttttggaattatgtcattcgcttttgttgtacttgggatttattggttctatcagtacatgaagttttggcgtgaagttctgccactgcaaaactgtattactcttgtcattacattgggcatgcttgagatgtcattgtggtattttgagtatgctgagttcaacgagactggtgttcgaccaaagggcatcacattttgggctgtaacatttgggactgttaaaagaacagtagcccgtgttattattctcattgtctcaatgggatatggagttgtcaggcctagtttgggtggtctcacatcaaaggtggttatgcttggaggaacattctttttagctacggaaatccttgaattggtagaaaatcttggtgccgtaaatgatctatctggaaaagctcgattgttcttggtttatcccgtggctattttggatgctgcattcgttgtttggatttttatttcgctagctaagacccttgacaaacttcaggccagaaggtcaatggccaaacttgacatttacaggaaattcacaatagcattggctgtaactgttctggtgtctattggctggattggctatgagatttacttcaaatcaacagatgtattcaatgaacgatggcagtatgcatggataattcctgcgttctggcatgtcttgtctttctcacttctttgtgtcatttcatacctgtgggcgccgtcacagaactcaatgaggtttacctatgatgcaagcgaaaactttgatcgagaggacagtctgtcactaataaggccaggtcccattgcttccaagaacgggtggagtttatcttcttcaccagacaccaaagcaacaaagaacgttacagttacatcttttgatggagatgacgaagaaaacaaaagggagtag</cdnaseq>

Protein Sequence

<aaseq>MAAVSAAAARLHHLLSLCVAVAGLLLMLLGGGEASVHEYRGLGF LNKGNAFILHAGSEGLYAPSSPANATTAEDDEDAAAAAVADAFIRFDKITFRRPKDAA KETGSAMVQILVFEIEDREMIGGSAYGGQKAICCTSDLAKLGACTEGSVIYRPSQVNP GWPQLLFSSFDGSDTIATLPSRIIPITKTGMYNMYFIHCDPSLAGLEIEGQTVWKNPT GYLPGRMAPLKNFFGIMSFAFVVLGIYWFYQYMKFWREVLPLQNCITLVITLGMLEMS LWYFEYAEFNETGVRPKGITFWAVTFGTVKRTVARVIILIVSMGYGVVRPSLGGLTSK VVMLGGTFFLATEILELVENLGAVNDLSGKARLFLVYPVAILDAAFVVWIFISLAKTL DKLQARRSMAKLDIYRKFTIALAVTVLVSIGWIGYEIYFKSTDVFNERWQYAWIIPAF WHVLSFSLLCVISYLWAPSQNSMRFTYDASENFDREDSLSLIRPGPIASKNGWSLSSS PDTKATKNVTVTSFDGDDEENKRE</aaseq>

Gene Sequence

<dnaseqindica>3476..3653#2982..3118#2694..2789#1586..2507#40..305#acgctcagatccagcctcgcttcgctgccccccacctccatggcggccgtgtcggcggcggccgcccgcctgcaccacctcctgagcctctgcgtggccgtcgctgggctgctgctgatgctgctcggcggcggggaggcgtcggtgcacgagtaccgcgggctcggcttcctcaacaagggcaatgcgttcatcctccacgccggcagcgagggcctctacgcgccgtcctcccccgcgaatgcgacgaccgcggaggacgacgaggatgccgccgccgccgccgtggccgacgccttcatccggtaaattaaaatttgattagctcgctgttacttccgctgctgccttgatcgatttcaatctgtgttattccgcgcgatgtggggcttctgcgctggagtcggtctggcagccgacgacccggtggatcttgggtgccgccaccttggggggctctgtaggatgcgtggctggtttgtgttgatggggttttccctgaaaatgtaggaaattcttgtttacgttgctgtttgcttgtggtaagttgatcagctgtgggatggggtgtgttgctcttgggtgaatttgtgtgctagaaatgggagatcccctctctgttttaaataataataataataagataaaataaaagaattgtgtgctagaacgcattgtgagtgctatggagagaatttcttgtaagcaggtgtagatttgctggtatagcttgggcgattgaagatgcttctgatttgtgtgatgagaggtactgagctaaggactaaggtggatagtcagagtcaaagtggttttgtgtgaatagtgatggacttctatgagctccattcaaattcattatgacacattggcgctaatcggagcaagattgatgttgatttgaactccagatgggcattgtgaagttaattgtgcttgatcagcttgatgatagtgttgtcagttggtgtaagtgtgtagctaaaagcctaacacgactatatgaggagtactaaggtaaacttgtgaaggataatatgcatgggatagaacaacttggtaggatcaaacaagctttaagtttgtttaaattgttcttgggccagcatacagtgtccatatatatttaacaagctgaaatgatggaattggtacttatctttttggctttaactacagccccctacccgtacaggctgattatgttttgagttttgcttactactccctctgttccaaaatataagcatttctgtgagttttagcagaaattaaggttgggatgagatggttgtgattggttgagatgaggaagtatgcggagaaattaaacgagagatcggtggtcgtgaatggttgaaatgagaaagtaggtggagaaatccttctattatggtacaaattttaaatcctagaaatgcttatattttggaacataggggattgttaattatgctacaaattggaaacttttgtttatggagatgtagttctagcatttaaaatgtccattttattattgtcatttattataggtgtatccagagcttgcaaatgtaaacttaaaatgtctctcactttctagatttgacaagattacgtttaggagaccaaaggatgctgcaaaggaaactggttcagcaatggttcagatacttgtttttgagatagaagatcgtgagatgattggtggatcagcatatggaggtcagaaagctatttgttgtacctcagatcttgcgaagttaggagcttgcacggaaggttctgtcatctatcggccatcacaggtgaatcctggctggccacagttgcttttttcatcttttgatggaagtgacacgattgcaacactaccttcaaggatcattcctataacaaaaaccgggatgtacaatatgtacttcatacactgtgatccatcacttgctggtctggagatagaggggcaaaccgtatggaaaaatcctactgggtatcttcctggtcggatggcacctcttaagaacttttttggaattatgtcattcgcttttgttgtacttgggatttattggttctatcagtacatgaagttttggcgtgaagttctgccactgcaaaactgtattactcttgtcattacattgggcatgcttgagatgtcattgtggtattttgagtatgctgagttcaacgagactggtgttcgaccaaagggcatcacattttgggctgtaacatttgggactgttaaaagaacagtagcccgtgttattattctcattgtctcaatgggatatggagttgtcaggcctagtttgggtggtctcacatcaaaggtggttatgcttggaggaacattctttttagctacggaaatccttgaattggtagaaaatcttggtgccgtaaatgatctatctggaaaagctcgattgttcttggtttatcccgtggctattttggatgctgcattcgttgtttggatttttatttcgctagctaagacccttgacaaacttcaggtgagcaatatacttttatattattctttatcaactccttttgccctatccaactaacctatttcagatttatcagtgcaatgtcttttatgttatttatttcacaggtaggaggtgacacaatgttgacttatttaaaaatgaaaaataactaaccagctgtaatcgttttcttgtggatcacaggccagaaggtcaatggccaaacttgacatttacaggaaattcacaatagcattggctgtaactgttctggtgtctattggctggattggctatgaggtacgttaatgtgtatcaaaaccatatgttgactgtattgagtccaagaaaatatcattgtcttgcacaaaactggttttgcctcacccgttgtagaggctgcatacttcagagtcatgtatttgttttttaagaatctagtcattttatcttgttcagaatttaaggtgctgtggttgacatttgttgcagatttacttcaaatcaacagatgtattcaatgaacgatggcagtatgcatggataattcctgcgttctggcatgtcttgtctttctcacttctttgtgtcatttcatacctgtgggcgccgtcacagaactcaatgaggtacaatccttatcttttggtgaatttcaacctggataatactcaagttttattgtttcatttagcatttcattgcagtagatgtgctgaatgactagtagacagctaagaaaatgtttctcatcattcagttgcactgtttatttctgacctgtcatactttcccttgaaaagagaacataaaccaacattgtagctttcggtagcatttttctccagtgcatgcacttaggtaccatgtcagaattttgaacctccctgtataatttatgcaatgagatcctacactatagtaaggtaggaaataggccctttgttagaaatggggaatcacatttctttggctacccattttaggtttacctatgatgcaagcgaaaactttgatcgagaggacagtctgtcactaataaggccaggtcccattgcttccaagaacgggtggagtttatcttcttcaccagacaccaaagcaacaaagaacgttacagttacatcttttgatggagatgacgaagaaaacaaaagggagtagaaggggcactgtgcatttcatgagggagagaagatacagccacattcaaattttggtatgcagcagatcacactttactaattctagttgtcgggatacgccaagggaattatggaagtaatctttattgaattcatttcctccatatagtagtttttcacacggtgcgccacgttataggcatcactgtatggatgatgatatatatgataggaacaatttatctatgccatccagaggatgtgtggtgtataatgtgtatttttgtagatttgatgctgcttctggtttatgtgaactccaagattgtcatgtacggtagaagagaatgttgtttttctgtgttttatttatttattcttgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0439700, RefSeq:Os09g0439700