BGIOSGA001608

From RiceWiki
Revision as of 18:12, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA001608

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001608, complete gene.

LocusTag

OsI_02005

Ensembl Transcript ID

BGIOSGA001608-TA

Ensembl Protein ID

BGIOSGA001608-PA

Length

8925

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:17451722..17460646

Sequence Coding Region

17460401..17460646,17454042..17454396,17452464..17452498,17451722..17452024

Genome Context

<gbrowseImage1> name=IndicaChromosome01:17451722..17460646 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:17451722..17460646 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGGGAGGCGCCAATAATAAGGGCTTGGTATGCTTGATCGCCGCCGCCGCCGTGGTGTTGGTATTCGCCGGCAGCAGCGGCATTGCGGCGGCGCAGGCGGCCGGGCTGAAGAAGGGGTTCTACAAGAAGAGCTGCCCCAAGGCGGAGGAGATCGCGCAGCGGGTGGTGTGGAACCGCGTCGCCGGCAACCCGGAGCTCGCCGCCAAGTTCCTCCGCATGTTCTTCCACGACTGCTTCGTCAGGGGGTGTGACGCGTCGGTGCTTCTGGACTCGGCGAGCAACACGGCGGAGAAGAACGCGGCGCCGAACCTGTCGCTGGCGGGGTTCGAGGTGATCGAGGAGGTGAAGGCGGCGGTGGAGCGGGAGTGCGCCGGGGTGGTGTCGTGCGCGGACATCGTGGCGCTGGCGGCGCGGGACTCGGTGTCGTACCAGTACAGGAGGAGCCTGTGGGAGGTGGAGACCGGGAGGCGCGACGGCACGGTGTCCAGCGACCAGGAGGCGCTCGCCGACATCCCGGCGCCCACCTCCACCTTCCCCATCCTCCTCGCCAACTTCTCCGCCAAGGGCCTCGGTCTCCAGGACCTCGTCGTCCTCTCAGAATTACACAATTTTATACATATTCTCTATGTTAATGGGCAGTGCAGGCGTAACCAGCAGGACCCAAACGACAACTCGACGGTGGTGCCGATGGACCCGGGCAGCAGCGTGTCGTTCGACAGCCACTACTTCGTGAACCTCAAGGCGCGGCAGGGGATGTTCACCTCCGACGCCACGCTGCTCACCGACGGCCGCGCCGCCGCGCTCGTCGACAAGCTGCGGGACCCCGGCGTCTTCCTCGACCACTTCAAGAACTCCATCAAGCGCATGGGTCAGATCGGCGTGCTCACCGGCGCCGCCGGCCAGATCAGGAAGAGGTGCAACGCCGTCAACTCCTAG</cdnaseq>

Protein Sequence

<aaseq>MQGGANNKGLVCLIAAAAVVLVFAGSSGIAAAQAAGLKKGFYKKSCPKAEEIAQRVVWNRVAGNPELAAKFLRMFFHDCFVRGCDASVLLDSASNTAEKNAAPNLSLAGFEVIEEVKAAVERECAGVVSCADIVALAARDSVSYQYRRSLWEVETGRRDGTVSSDQEALADIPAPTSTFPILLANFSAKGLGLQDLVVLSELHNFIHILYVNGQCRRNQQDPNDNSTVVPMDPGSSVSFDSHYFVNLKARQGMFTSDATLLTDGRAAALVDKLRDPGVFLDHFKNSIKRMGQIGVLTGAAGQIRKRCNAVNS</aaseq>

Gene Sequence

<dnaseqindica>1..246#6251..6605#8149..8183#8623..8925#ATGCAGGGAGGCGCCAATAATAAGGGCTTGGTATGCTTGATCGCCGCCGCCGCCGTGGTGTTGGTATTCGCCGGCAGCAGCGGCATTGCGGCGGCGCAGGCGGCCGGGCTGAAGAAGGGGTTCTACAAGAAGAGCTGCCCCAAGGCGGAGGAGATCGCGCAGCGGGTGGTGTGGAACCGCGTCGCCGGCAACCCGGAGCTCGCCGCCAAGTTCCTCCGCATGTTCTTCCACGACTGCTTCGTCAGGGTACGCACACAAATTGAATATATCCATATACTGGCCAATCATATATATATTCCCCTCTGTAGATTATAGGATATTTTGACTGATTAAAGTTAAACTACTTCAAATTTAATTAAGTTTGTAGACATATATATATAGGATGTGTTCTTCCCCCTTTTCCCAACTCACATCTCTCGTTTTCCACGCGCACGCTTTTTAAACTGCTAAACAGTGTGTTTTCTGAAAAAAAATTTCTATACAGAAGTTGCTTTAAAAAATCATATTAATCTATTTTTTTAAAAAATAGTTAGGACTTAATGAATCATGTTAAAAGACCGCTCCGTTTTGCGTGTAAAAGAGATGGGTTCCCATCCTGCACTGCCGAACGCAGTCTTAATGAACTGCCCATTATCTAAGAAAATAATTAGTCTCTGTACGTATACTTCTTCAGTGATCGATGCAAGCAATGCAAGAAATTGTGTACGTACCTGAGAGGACGACGAGGTCCTGGAGACCGAGGCCCTTGGCGGAGAAGTTGGCGAGGAGGATGGGGAAGGTGGAGGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTCAACTGTTATTTTGTCTGGTGTTTATATCGCGACATCTCCATTAATTATGCATCACATTCTTGAGATTGCTGGACATCTTAACACTTATGAGAATGATATTAACTTTAGAAATGTTGTTGTTCCCATGAAAAGTAAGTTCTTGGCATACTGGTCTGAGATTCCATTTCTGTATTCATTTGCTTTTATCTTGGATCCTAGGGCTAAGATCAGAGGTTTTAGCAATGTTCTATAAAATATGTCACAAATTTTGACCTCTGATTACTCTACTTATTTAACTGAGGTTAGGGCTGCATTGTCTGACATTTTTCTAAGTATGAAAGTAAGTTTGGTGCTGTGAGATTGCAAAGAACAACCCCAGGCAGTACTGCTAGTAAGAAAAAGACAGCCTGGGGAAAGATTTTTGGTGCCAGTGATGCACTTGGACATGGTGCTGGTGCCAGTCCAGAACCTGGACTTGGTGCTGGTGCCAGTCCAGGTTCTGGACTTGGTGCTGGTCCATTTTCCAGGAGAACTTCTGCTACTGCTTTGATTCAAGCTGTTTCTTCTAATGCTAACTTGAATGCCTCTGAGTTGTCTGCCTATCTTGACTGTGACATTGTCAACCAATTCGACGATGACTTCAATATCCTAAACTGGTGGCATGAGCACAAACACACATATCCTATTATGTCCATATTAGCTAGAGATGTCTTGACTGTTCCTGTTTCTACTATATCGTCGGAGTCTGCTTTTAGCTTAACTGGCAGGATCATCGAGGAGCGACGACGGCGTCTAGGTCCTAACATGGTGCAAGCTTTGGCATTGATCAAGGACTAGGTGCAGGTAGACAAGAAGTTGCAGCACACTGCTGAGAATGTAGAGCCTATAAAATCATTTGAGAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACTTAGACACCTCAGCGCCACATCAACTAGCGCTGAATACCGTACCACCGCAGATGGGAGGCTAAGTCAGCGTGCCAACGTACATTCAGCGCCACACGATTTAGCGTTGAACAGAAGGGTCAGTTTTGAAATAAGTTTTGACGGCGGTTTATTTGTAAAAATAGTTTTGCAAAGGGTTAAATTGTCAAAATTTGTGCGCTAGCTGTGAGTTAACTAGCCACTCTATATATTTCTGAGGGTGTTTTTTTTATACAGCTTTAAAAGTTCTGGGTGAAAAATAATTGCTTTTTGTAGTTAGGGAGAAAATTAGTCTTTGAGCAAGTTAGACGTCAAAAATGTACTTTACCCAATTAATAGCATCACCAACAACATTGGCTAAATTTCATCTCCAAAAATATGAATTTGAGAATCTTAAATGAAATTTGATGTGTAAAAATAGTTATCTTCTGTTAAAAAAATTGGGTAAAATTAACCCCTAAAACCAAAAGGTGGGCCCTATATGAAACTAACCAAAAGGTGGGCCCTATATGAAACTAACATAATATCGTACAGACGGGCACCTGTTAATCAGTACTACAGTTGTACAAACTACAACGTAAAATATGACAATGAAAGTAGATATTGAATTAAATTATTGTGATCCTATGTATTTTTCTTCCAACACCTAAATTAATTAAAGTGGACTATCATCGAAGGGCAAGCATGTTGCCCGTGTACGTTCAGATTAACGGAATAAGCACCACTACGTACTAAAACAGATTCTTGCGTAGGATCGGAGACGAGAGACGTTGAAATGTTGACATCCTATCATGATGATCCCCCTTAATAGCTCGGGCTGGTGGTTGCCACTTGCCTGCAGCCCTGCTGATAAAGTCAGGATCTATCTGTAATCTGACATCCGCTCACATTAATCCCGTGACAGAGATCTGCAGACGCTCAACACTCGCATAAAAGAAAGGCAAGAATTTTGCCGGCGACTTGCATTGGTGTACGTTGATCGAGTTAGTTAGCTGGGCTACACTAATTGGAAATATAATTAAGCACATGTGGGTACACTAAACATGCATGTATATCAATAGATCCATATCATATGTAGTATGATTTATACATGTATACGACAGCACTGCATGTGAATAGATCAACACGAAACATAGTCGAAACGTACTGATGGTTTAGTTCTAAAGGACGCACAACACCACTGCTACAAAATACTTCATATCTTATAGGAAATTGCTCGTAGGTAAAACCGACACATATAAACTTTTTCTACATCCGTGTGATGAAAAAAATATAGAACTAGCATTTTTAAACACTATAGATCCACATCCGTGATGAAAAAAATATAGAACTAGCATCTTTAAACACTATGGATGCCAGTTCTTAAAAAAAAAAGGGCACTTATACTTATAAGTACCGACACATATAATCCTATGTATATATTCTTATATAATTCATCTCCTCCACTAAATATAATTAATGCTATTCTCTCTTTTTTCATTAAGCCACATCACCTCAATTATTTTTAGTCTTTGGATGATAGGTCTATGGTTCAAATTGTCTCTTTTTTCTTCTCTCATAACAGCTATGCGATCTCACTTGTTTTTAGGATCAAAATTCATAAATATCAATTTATTTTAGTTTTAATAATCATATTGCATCTTATTGTATATATTATGAAACTTAATTTTCCACGGTAACGCGGCGGAGTATTCATCTATACCAAACCGAGCCGAGCCGGTGAACCGAGCGCCATCCTTATCTACTCCCATCCAGCGCTCGCGTCCTATCCATTTCTCTCGTCTCTCTCCCTCGCGTCTCTATGCCTCCCCTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGTTGGGAAGATGGGGTGCCGAACTCAGCCTAAGTACATTCATGAAAGCATCCGTTTTCTGAACAAAACTGATGAACTCGACCAAAACACAACGACGCACACGGAAGAAGAATAAAAGAACAGTACCGGCCGGTACTCCCCCTATTACATCTTAACTTGAACAAACTCATTAGCTAAGTCCAAGATGGTTACGCCATCCAAAATTAGACCACAAAGCACAGGGACAACTAATCATTGGGGTTGATTTCTTGATTTATCACTTCAGCAGTATCAAAATTGTTTAACTAGCTAGGGCCTATTTTGTTTATTTGTATATGCCTAGTATTAGCCTGTAATATGTTTTCCAAGTTGTCCTAGTGACCTAGTTCACGACATTTCTCAAGAAAAATTCTACTTTGACATTTCTTAATGCAAAAAGGGAAATAATTTTACCATCTTTGTAAAGGTAAAAAAGATAACATATTTTCGAATTGTAAAATTTGGTATCTACTAATATCTCAAGGTATTAAAGTTTTTAGTTTAAAATCTTGATACATTTAGTTACTTTCTCAAGTAAAGTAAAATTTGTAAAAAGAAAAAGAAAACCGTCCATATGAAAGGTTGCATGGATTTGAATTGAAGCATGTTGATTAAAGACAACTGTTCCCGTAGTGTGAAAACAACCGCTTGATTGCAATAGCCCAGCTGAAAATGACATAATTGTCGGTGATGGGGCAAAGAATTAATTAAACTTCACCACAGGCCACATGCACGTCCGGTTAATGCGCATGTGAGCCAAAACAGTATACGAAGATGCAACCACCAGATTGGATAGATTTAGCTTCAATTCGGTAGGTAAAAAAAAAACAATCCTTGGGAAAGTAATCCCAGTCAAGATAGCAGCTTTAGGAATTAAAAAAATTCAAATCAAACGTCGGATAAAAAAAATTATACCAAACATGAATGTTTTTTTATTCATATTCAACATTATTACCACAGTCCATTTTTGGATTGTTGTAAGACGGACTACTCACCGTACTAAAGTAGGATGGATGACTGCAGTACTTAATTAGAATAGACGGTACCGCTTAGATAGCAGACAATCCTCCTAATAGCATGCGACCCATACTTAGAGCGCGTGAAACTCATCACATGTTATCTTGAGCGGTATGTTACTAGCCAGCGTCGGTTTCTCATCAGTGTTACTATCATACAGCTGTTCAACTTAAAAGCTACTCGCTCTGTGGTTCGCATGGGTCGTGCCACTATCTATTGGACAAGACCCATAAACATAAATCCTTCGAATAGAATTACACAATTTTATACATACTCTCTATGTTAATATAAGTCCTTGTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATTAAATTTATAATTGAATATATTTCATAATATATTTGTCTAAATTAGTTTTAGATCGATAATTGAATATATTTTTATGATATATTTGTTTTGTGTTAAAAATATTTTTATTTTTTCTATAAACTTAGCCGAACTCGAAAGTCAGAACGAGTTATAAACTGAAATAGAGAGAGAGAGTATATCCAAACGATACACCATGCACAATTGTATTCTTGATGTGTGCAAATGGATATATAATGTACATGAAGGGGTGTGACGCGTCGGTGCTTCTGGACTCGGCGAGCAACACGGCGGAGAAGAACGCGGCGCCGAACCTGTCGCTGGCGGGGTTCGAGGTGATCGAGGAGGTGAAGGCGGCGGTGGAGCGGGAGTGCGCCGGGGTGGTGTCGTGCGCGGACATCGTGGCGCTGGCGGCGCGGGACTCGGTGTCGTACCAGTACAGGAGGAGCCTGTGGGAGGTGGAGACCGGGAGGCGCGACGGCACGGTGTCCAGCGACCAGGAGGCGCTCGCCGACATCCCGGCGCCCACCTCCACCTTCCCCATCCTCCTCGCCAACTTCTCCGCCAAGGGCCTCGGTCTCCAGGACCTCGTCGTCCTCTCAGGTACGTACACAATTTCTTGCATTGCTTGCATCGATCACTGAAGAAGTATACGTACAGAGACTAATTATTTTCTTAGATAATGGGCAGTTCATTAAGACTGCGTTCGGCAGTGCAGGATGGGAACCCATCTCTTTTACACGCAAAACGGAGCGGTCTTTTAACAAGATTAATTAAGTATTAGCTATTTTTTAAAAAAATAGATCAATTTGACTTTTTAAAGCAACTTTCGCATAGAAATTTTTTTTAAAAAAACACACTGTTTAGTTGTTTAAAAAGCGTGCGCGTGAAAAACGAGAGATGCGGGTTGAGAAGATGGAGTGCCGAACTCAGCCTAAGTACATCCATGAAAGCATCCGTTTTCTGAACAAAACTGATGAACTCGACCAAAACACAACGACACACACGGAAGACGAATAAAAGAACAGTACTGGCCGGTTACGCCATCCAAAATTAGACCACAAAGCACAGGGACAACTAATCATTGGGGTTGATTTCTTGATTTATCACTTCAGCAGTATCAAAATTGTTTAACTAGCTAGGGCCTATATATTTTGTAGATTTGTATATGCCTTGTATTAACCTGTAATATGTTTTCCAAGTTGTCTAGTGACCTAGTTCACGACATTTCTCAAGAAAAATTCTACTTTGACATTTCTTAATGCAAAAAGGGAAATAATTTTATCATCCTTGTAAAGGTAAAAAAGATAACACATTTCGAATCGTAAAATTTGGTATCTACTAATATCTCAAGGTATTAAAGTTTTTAGTTTAAAATCTTGATACATTTAGTTACTTTCTCAAGTAAAGTAAAATTTGTAAAAAGAAAAAGAAAACCGTCCATACGAAAGGTTGCATGGATTTGAATTGAAGCATGTTGATTAAAGACAATTGTTCCCGTAGTGTGAAAACAACCGCTTGATTGCAATAGCCCAGCTGAAAATGACATAATTGTCGGTGATGGGGCAAAGAATTAATTAAACTTCACCACAGGCCACATGCACGTCCGGTTAATGCGCATGTGAGCCAAAACAGTACGAAGATGCAACCACCAGATTGGATAGATTTAGCTTCAATTCGGTAGATAAAAAAAAAACAATCCTTGGGAAAGTAATCCCAGTCAAGATAGCAGCTTTAGGAATTAAAAAAATTCAAATCAAACATCGGATAAAAAAAATTTATACCAAACATGAATGTTTTTTTATTCATATTCAACATTATTACCACAATCCATTTTTGGATTGTTGTAAGACGAACTACTCACCACAAGTACTAAAGTAGGATGGATGACTGCAGTACTTAATTAAGTAGAATAGACGGTACCGCTTAGATAGCAAACAATCCTCCTAACAGCGTGCGACCCATATTTAGAGCGCGTGAAACTCATCACATGTTATCTTGAGCGGTATGTTACTAGAAAGCATCGGTTTCTCATCAGTGTTATTATCATACAGCTGTTCATCTTAAAAGCTACTTGCTCTGTGGTTCGCATGGGTCGTGCCACTATCTATTGGATAAGACCCATAAACATAAATCCTTTGAATAGAATTACACAATTTTATACATATTCTCTATGTTAATGTAAGTCCTTGTTTTTCGCAAAGTTAATATTTGAAAACTAATCTTAATGAAACCAGTCAAATTTAATTTTGGAACTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTTCAACTTCACCGGAAAGAACAACCCCAGCGACGTCGACCCGTCCCTCAACCCATCCTACGCCAGATTCCTCCAGGTAATTAATTAACCTGTTAATTAGTGGAGTAATGGCTAATCTCTGCAGTAATTTAATCGCATCATGTCTTGCAAAATTCAGAATTAAGATCAGTAGCTGCAAAAAGGGAAAAAAAAAGCATAGAAAAATATGTACTACAGCAATAATTGTGTGTGTGTGTGTGCGCGCGCGCGCAAGTGCAGGGGCAGTGCAGGCGTAACCAGCAGGACCCAAACGACAACTCGACGGTGGTGCCGATGGACCCGGGCAGCAGCGTGTCGTTCGACAGCCACTACTTCGTGAACCTCAAGGCGCGGCAGGGGATGTTCACCTCCGACGCCACGCTGCTCACCGACGGCCGCGCCGCCGCGCTCGTCGACAAGCTGCGGGACCCCGGCGTCTTCCTCGACCACTTCAAGAACTCCATCAAGCGCATGGGTCAGATCGGCGTGCTCACCGGCGCCGCCGGCCAGATCAGGAAGAGGTGCAACGCCGTCAACTCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001608