Os08g0519300

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Revision as of 13:08, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0519300| Description = Glycoside hydrolase, family 18 protein| Version = NM_001068793.1 GI:115477323 GeneID:4346055| Length = 906 bp| Defi...")
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Gene Name

Os08g0519300

Description

Glycoside hydrolase, family 18 protein

Version

NM_001068793.1 GI:115477323 GeneID:4346055

Length

906 bp

Definition

Oryza sativa Japonica Group Os08g0519300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25866461..25867366

Sequence Coding Region

25866461..25866883,25866938..25867366

Expression

GEO Profiles:Os08g0519300

Genome Context

<gbrowseImage1> name=NC_008401:25866461..25867366 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25866461..25867366 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctgatccgacgccggctcctcccaattctgtcccttctcctcgccgtcaccttcctcgccggcgttgcgacggcgaagaagaccggccaactcaccgtcttctggggacgcaacaagaacgagggcacccttcgcgagacctgcgacacgggactctacaacatcgtcatcatctccttctacagcgtgttcggccatggccgctactggggcgacctctccggccacgacctccgcccaatcggcgccgacaacaagcactgccaatccaaacacatctccgtcttcctctccatcggcggcgccggcaatgattactccctcccatcctcccaatccgccgccgacgtcgccgacaacatctggaacgcgcacatggacggccgccgccccggcgtgttccgcccattcggcgacgccgccctcgccgtcaagctctacgcatacaacaaattgtaccgtgctcggacgccggtgaggctgacggcgacggtcaggtgtatgttcccggacatgaggatgacgaaggcattggacacgaagcttttcgagcgaatccatgtcaggttctacgacgacgccaagtgctcctacaaccatgggggcctcgccggcgtgatggcgcagtggagcaaatggacggcgaggtacccgaacagcgaggtttatcttggtctcgcggcggtgaacttgccggggaagaatgacaatgtgtttgtcaagcagctctactactatctgcttcccaatgtgcagaaggcgaagaattatggtgggattatgctttgggacaggttctttgacaagcagactggttacggcaaaaccgtcaagtactgggcttaa</cdnaseq>

Protein Sequence

<aaseq>MALIRRRLLPILSLLLAVTFLAGVATAKKTGQLTVFWGRNKNEG TLRETCDTGLYNIVIISFYSVFGHGRYWGDLSGHDLRPIGADNKHCQSKHISVFLSIG GAGNDYSLPSSQSAADVADNIWNAHMDGRRPGVFRPFGDAALAVKLYAYNKLYRARTP VRLTATVRCMFPDMRMTKALDTKLFERIHVRFYDDAKCSYNHGGLAGVMAQWSKWTAR YPNSEVYLGLAAVNLPGKNDNVFVKQLYYYLLPNVQKAKNYGGIMLWDRFFDKQTGYG KTVKYWA</aaseq>

Gene Sequence

<dnaseqindica>484..906#1..429#atggcgctgatccgacgccggctcctcccaattctgtcccttctcctcgccgtcaccttcctcgccggcgttgcgacggcgaagaagaccggccaactcaccgtcttctggggacgcaacaagaacgagggcacccttcgcgagacctgcgacacgggactctacaacatcgtcatcatctccttctacagcgtgttcggccatggccgctactggggcgacctctccggccacgacctccgcccaatcggcgccgacaacaagcactgccaatccaaacacatctccgtcttcctctccatcggcggcgccggcaatgattactccctcccatcctcccaatccgccgccgacgtcgccgacaacatctggaacgcgcacatggacggccgccgccccggcgtgttccgcccattcggcgacgccgccgtcgacggcatcgatttcttcatcgacaacggatcgcccgaccactaagacgagctcgccgtcaagctctacgcatacaacaaattgtaccgtgctcggacgccggtgaggctgacggcgacggtcaggtgtatgttcccggacatgaggatgacgaaggcattggacacgaagcttttcgagcgaatccatgtcaggttctacgacgacgccaagtgctcctacaaccatgggggcctcgccggcgtgatggcgcagtggagcaaatggacggcgaggtacccgaacagcgaggtttatcttggtctcgcggcggtgaacttgccggggaagaatgacaatgtgtttgtcaagcagctctactactatctgcttcccaatgtgcagaaggcgaagaattatggtgggattatgctttgggacaggttctttgacaagcagactggttacggcaaaaccgtcaagtactgggcttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0519300, RefSeq:Os08g0519300