Os08g0519600

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Revision as of 13:08, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0519600| Description = Protein of unknown function DUF1666 family protein| Version = NM_001068795.1 GI:115477327 GeneID:4346057| Length = 5...")
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Gene Name

Os08g0519600

Description

Protein of unknown function DUF1666 family protein

Version

NM_001068795.1 GI:115477327 GeneID:4346057

Length

5304 bp

Definition

Oryza sativa Japonica Group Os08g0519600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25905766..25911069

Sequence Coding Region

25906267..25906759,25907381..25907788,25909929..25910125,25910659..25910904

Expression

GEO Profiles:Os08g0519600

Genome Context

<gbrowseImage1> name=NC_008401:25905766..25911069 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25905766..25911069 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatttcttcaagatcaagaagttggggaaggcccggaagagcggcgggggcgggggagaggttgtagaatcagaggaggaaaccaaggctgggaacaatgcagcttccgatgagcagaagggcaagatcttggaggatgatcctgcggcggcagcagccggtgcgggtatggatgcagatgcaggcaatggggccgtggaagggcaggaggaggatgatgacgatgatgatttcatcaccaatgaggtgaagcgtaggctcaaggagctgaggaagaacagcttcatggtgctcatccctgaggaggagtgtgctgaggtggaggaggatggggaagaggaggaggaggaagggagtagttccagggagtggatggagtccgacgtcggcgacgggttcccgctatgcgggttcgattcgctctatgagaagtattgtgagaggatggcggtgttcgataagatgatcacgcagcttctcaaggatccagggtccttcaacatctcaaaaaagtcgcctagatcagcatccaaattggcatcaaccctgcgcaacctctctttcaaaaggagggatgacctccaggaggactgcgaacatcttcagcaacagcagagcgaggatgatccctaccaaacacttgagacagcatatgttgggcatgtttctttaagttgggaggctcttcattgtatgtatgtgcacctgagtctgatactcgcagctcaacctgataatcccaccacctacagctgtgctgctcaagcattccagcagttccaggttctattgcagagatttgttgagaatgagccatttgagcaaggttcacgggttgagatatatgcacggtctcggagttccttgtcgaagttacttcaggtccccacttttcaagttgcagatgggaaatataatgctgaagatcaagtggaaccttcaatttttgcatctgacctcatcaaattattagaggagtctatcatgactttccgtcttttcctgaaaaaggacaagaaaaagaatagtgccctcatgagtgttcatagtcatactggaagctcgattcaacaagttcaatcctctcttgataagaaggaagtgaaagtgaaggagctattcaagaagaagaaaggatggaagagcaagacctggccagccacaatggaggaagttcagctgctttttgccttaatcgacatcaaggttgtgtcaagggtcctaaggatggcgaagctcagcaaggagcagctcctgtggtgtgaggagaagatgagcaagctggatctctccgacaacaagctgcggcgcgatggatccccaatcctgttcccctgttga</cdnaseq>

Protein Sequence

<aaseq>MDFFKIKKLGKARKSGGGGGEVVESEEETKAGNNAASDEQKGKI LEDDPAAAAAGAGMDADAGNGAVEGQEEDDDDDDFITNEVKRRLKELRKNSFMVLIPE EECAEVEEDGEEEEEEGSSSREWMESDVGDGFPLCGFDSLYEKYCERMAVFDKMITQL LKDPGSFNISKKSPRSASKLASTLRNLSFKRRDDLQEDCEHLQQQQSEDDPYQTLETA YVGHVSLSWEALHCMYVHLSLILAAQPDNPTTYSCAAQAFQQFQVLLQRFVENEPFEQ GSRVEIYARSRSSLSKLLQVPTFQVADGKYNAEDQVEPSIFASDLIKLLEESIMTFRL FLKKDKKKNSALMSVHSHTGSSIQQVQSSLDKKEVKVKELFKKKKGWKSKTWPATMEE VQLLFALIDIKVVSRVLRMAKLSKEQLLWCEEKMSKLDLSDNKLRRDGSPILFPC</aaseq>

Gene Sequence

<dnaseqindica>502..994#1616..2023#4164..4360#4894..5139#accaccactgccactgtagcgtcatgctgtaacgctcgcttaaacccaagcacgcagcacacgctctccattccattcccctcccgattgatctccgcctcgatcccccccgacgccgccatatggagctcaccgccgccgcgtgatgagctgccccggtcgcgattgctgggctccgctggtgattcgtcggttggatcttggaggttttttatccccattattcaagctggttactcgggtgggtggtttcttgaggctggtgcgtggttgcatttcacggatttatgagttcttttttttatttttatttttattttgttattagtttggggcttgttctttcgttgtttgcttcacttggtgatttgattcttgtggtgcttgcagggaagacaaaaaggggagtgaggttttggattaaggaaaggggaaggggatcttctttagcatcgatcggatcctctctgttgggatttcgaagcttctgcgcttccacggatggatttcttcaagatcaagaagttggggaaggcccggaagagcggcgggggcgggggagaggttgtagaatcagaggaggaaaccaaggctgggaacaatgcagcttccgatgagcagaagggcaagatcttggaggatgatcctgcggcggcagcagccggtgcgggtatggatgcagatgcaggcaatggggccgtggaagggcaggaggaggatgatgacgatgatgatttcatcaccaatgaggtgaagcgtaggctcaaggagctgaggaagaacagcttcatggtgctcatccctgaggaggagtgtgctgaggtggaggaggatggggaagaggaggaggaggaagggagtagttccagggagtggatggagtccgacgtcggcgacgggttcccgctatgcgggttcgattcgctctatgagaagtattgtgagaggatggcggtgttcgataagatgatcacgcagcttctcaaggatccaggtgaaatatttagcccgcggagtcgttctcgtatggttgattgtacattttgcatgtcttagttgaatgcgaaacctaatgtatattcatgttaaccacttggtcttagataacccctctgttattgccgttcatttgtttgtgggacattaattggccatatgattgcacgtgcgtgcatggtatcaattttagtacatatatgatacgatagattatataaatctaaatgactgttgaatatcatatactttgccattccttatgtgatgagtacataactaccatatgagtgtcatatgcttcatatggagattcttatgctaattgatggtatcattttgtatgataataaattgtcgtcttccgtaggtagttctattctgttaaccaatttcagcattttactggccaacagttcctgagtaatgtttcctttatgcatacatcagtgcctattaactttttgtcggacttgagggttccgtcttttccttgtgtagcaaggctacacttatgcatacacatttgcttacctaatcagacagtttcttttgccgttctattctataaagtctcaacaatttatcctttttaatgattggtaaacaaacttcctagggtccttcaacatctcaaaaaagtcgcctagatcagcatccaaattggcatcaaccctgcgcaacctctctttcaaaaggagggatgacctccaggaggactgcgaacatcttcagcaacagcagagcgaggatgatccctaccaaacacttgagacagcatatgttgggcatgtttctttaagttgggaggctcttcattgtatgtatgtgcacctgagtctgatactcgcagctcaacctgataatcccaccacctacagctgtgctgctcaagcattccagcagttccaggttctattgcagagatttgttgagaatgagccatttgagcaaggttcacgggttgagatatatgcacggtctcggagttccttgtcgaagttacttcaggtccccacttttcaaggtatgatttttaggtttgcaatctttaaacggacataacccatcatttgacaatcgaatatctttccgtgagcggtacaattcacccttaatcctcctggcagcttattgacttttttattttctagaaaataattatatcattgggttgagtttctgtgtagcatagtaattcatcgattttattacctgatgtttcttttaatcaaataatttctgtgcacattagtttcttttacaaaagccattacatttgtttggttgaaattttgtgtcttattgaacttaacttctgatagattgcccagtgacaaagccagcaagatgtacgtaccgttttggcatatgaagtaaaaagctctagcaattataggtaggtacattggcatactctcagaaaaaaaaaaggatacatcagctgtgcacactaatgcctcatctggcaaggcccaaatcttagtttaaattcctggtccatctctagggatgggctgggatttggacattgccaaacaaggcctaagacaccatggtttaccattggtaacatgtccagaatgacctactatgcagttctgtaagtaccagttactacagctaggacctaagcacattgaagatatcgtgctgtaggatggagatttctgacaatttttgcatcttcttcctcctacctgtaggttactcctgtgcaacacaaagtaatgcataccctttttttttgtgattgggttgtcacgtgcttgatatattgatctttattgttgctcgtacatctttcatcaggtcaacttaatctatttgcttatccaactaatgacattgtttagtacatgttttcacaatctgttaatctggtgctgctcttgggtaggtccttggtgataagctatggtactaagatgcatttaaaaatcaaatgtgttgacactaatgttggagagttataagtgtatgactggggtagattcagttgagagctttcatccttagatgtttaactcaagatgagtttaggatctagaacatactatgcatttgtccgtacagtctatatctcagttactagctgttgtgccagatgatagtttcttttttaaatcacacttatgtttaggatctaaaactttcagctactgattaacaacttgcgatttatggcaatgtctcccagaagtacaatcaaattggtaatgacttaatataattatgatggaaatgtttaagggccattagcccattataggagatatatagatcttacatcatgtttatccacatcagcatgtttgtcgtattaaacgacatgcagatactgccctggacgtagattattttaactttttaagtgtgactatctttggctttggcattgaatagcctagacattgcacatgctataagccattttgatctgctgtacattatggcactattaatggccagtattgcaccaccattggatcttttttcctttcaattctgtttcacatttcgtctgcgaccaagaaagatattaacagcagtcagatttataacatcattgagtaattatgtgaatatggcaacacctgaacactatatgtatccaagaattaagagccacatgtttcgtactgttgatttctgcaacatgtgctcaacctgtgactgaaatggtgtacacaagctttaagagcattctttgcaaatttaagatgtgtcagaatgccatgcccataaacttcctcatttattccataggattttgaaagatttctatcagtctagactcacagcaggacttggtacaggtataaattgtattacctagatgcaagctaatcggttggttgaaccaaatcttgtttaatgtgatgcttagtacaaaaaaatccctgaactccccaaaagatttccttgcatcagattttactttggtctaccagcaaggcagtaagttctgaatgcaataaacactgttgtctcttctgtggggccatggcttcacttttgcttttgttacaggattttttttttatgtttttgcattcatttgagaactgggttctttaaacacaatttttacacgactctgttaattaatgccattcttgtttttaattaatatatttcttttcatttttgtattctctatacagttgcagatgggaaatataatgctgaagatcaagtggaaccttcaatttttgcatctgacctcatcaaattattagaggagtctatcatgactttccgtcttttcctgaaaaaggacaagaaaaagaatagtgccctcatgagtgttcatagtcatactggaagctcgattcaacaagttcaatcctctcttgataaggtaatatcttattcttatatgtggctgattgactaacaaaacctcgagctccttggtaggtttctttagttcatatctgctgggtgctggttattcagtgtctcacggggtagttttatatttgatgaaacggggtagttttatattcattgttgctaacttttattggcttggttttcatatgatctctttctgaaatgtgctagtagtataatcactttttcctcaaatagatctgatgttcgtctcatatgaaacaaaagctctgaaagttatttgcatggatatggtatttgtacttgcacatggtggttgagtctgcatgccttcaagatttctttacagcatatgttaccaaacgtggcacgtcgagaaataaatgccatattactaatgcagcatctattcttagcaacgtgagcccaattagctgattcgattgttcacacgctctttcagtctcagatccgtgtatatctacagtttgtctttatacgactctttgtttctaatggatccctccaaacctgcagaaggaagtgaaagtgaaggagctattcaagaagaagaaaggatggaagagcaagacctggccagccacaatggaggaagttcagctgctttttgccttaatcgacatcaaggttgtgtcaagggtcctaaggatggcgaagctcagcaaggagcagctcctgtggtgtgaggagaagatgagcaagctggatctctccgacaacaagctgcggcgcgatggatccccaatcctgttcccctgttgacccatcgagtgcctgaggcaccgcaaaatgtggcatctgctacactttgaatactttatagcttagctgctgtatgagctgataccaccctattatatgtaaatgcctttaggtttaaatgctcatactaaaacgatacctaagaagagttgctgctagatcccc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0519600, RefSeq:Os08g0519600