Os08g0520000

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Revision as of 13:08, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0520000| Description = Mitochondrial substrate carrier family protein| Version = NM_001068799.1 GI:115477335 GeneID:4346061| Length = 4278 ...")
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Gene Name

Os08g0520000

Description

Mitochondrial substrate carrier family protein

Version

NM_001068799.1 GI:115477335 GeneID:4346061

Length

4278 bp

Definition

Oryza sativa Japonica Group Os08g0520000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25936691..25940968

Sequence Coding Region

25937014..25937264,25937428..25937665,25937932..25938265,25938745..25938839,25940708..25940947

Expression

GEO Profiles:Os08g0520000

Genome Context

<gbrowseImage1> name=NC_008401:25936691..25940968 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25936691..25940968 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcatggaggaggagggggtggcgcgcggcggcggcggcaagaagctcgcgctcgccagcatcggcttcgcggacgtccgtgtcggcgccgtggctggcggcggcggcgccggcgccggcggcgggtacaaggaggacttgttagtcgtgggcctgcccaaggacgacgacttcgatgtcgccaaggtcgtcggggacgtggccgtcgggctcccggacgtcggcgccgccgtcaggaatttcctgaggaatagagaagttggagaattcgtgagtggggcattagctggtgctatgactaaagctgttcttgctcctctagaaactatcaggacaagaatggttgttggggtaggatcaaaacacatttttggtagttttgtggagatcgtcgaacaaaatggctggcaaggactctgggcaggtaatacaataaatatgcttcggattattccaactcaagcacttgagcttggcacatttgagtgtgtcaaaaggagcatgacagaagcacaagagaaatggaaggaagatgggtgcccaaatatacaaattggcaatttgaaaattgagctaccacttcacttgctctctccaattgctgttggtggtgcggctgctggaatagttagcaccttagtgtgccatcctcttgaggttcttaaggaccgcctgactgtcaaccgtgaggcttatccaagtatcggccttgccttcaacaagatataccaaactgatggtattggtggtctctatgctggcctctgcccaacactagttggcatgcttccttatagcacctgctactatttcatgtatgagacgatcaagacttcttattgccgtgcacataaaaagaagtccttgagccgtcctgagctactcattattggagctctttcaggtctaactgcaagtacaataagcttccctctggaagtggcgaggaagcggcttatggttggaaccctgcaagggaaatgcccgccccacatgatcgcggccttagctgaggtgttccaagaggagggcatcaagggactttaccgcggatgggccgcaagctccctgaaggtgatgccgacctccggcattacctggatgttctatgaggcatggaaggacattcttttggctccagagctgcacacctag</cdnaseq>

Protein Sequence

<aaseq>MGMEEEGVARGGGGKKLALASIGFADVRVGAVAGGGGAGAGGGY KEDLLVVGLPKDDDFDVAKVVGDVAVGLPDVGAAVRNFLRNREVGEFVSGALAGAMTK AVLAPLETIRTRMVVGVGSKHIFGSFVEIVEQNGWQGLWAGNTINMLRIIPTQALELG TFECVKRSMTEAQEKWKEDGCPNIQIGNLKIELPLHLLSPIAVGGAAAGIVSTLVCHP LEVLKDRLTVNREAYPSIGLAFNKIYQTDGIGGLYAGLCPTLVGMLPYSTCYYFMYET IKTSYCRAHKKKSLSRPELLIIGALSGLTASTISFPLEVARKRLMVGTLQGKCPPHMI AALAEVFQEEGIKGLYRGWAASSLKVMPTSGITWMFYEAWKDILLAPELHT</aaseq>

Gene Sequence

<dnaseqindica>3705..3955#3304..3541#2704..3037#2130..2224#22..261#ttgcgttcctctcgagtagccatgggcatggaggaggagggggtggcgcgcggcggcggcggcaagaagctcgcgctcgccagcatcggcttcgcggacgtccgtgtcggcgccgtggctggcggcggcggcgccggcgccggcggcgggtacaaggaggacttgttagtcgtgggcctgcccaaggacgacgacttcgatgtcgccaaggtcgtcggggacgtggccgtcgggctcccggacgtcggcgccgccgtcagggtaaggggagggacacagatcttggcgtctgggggtagtgggatattggacgttttggagactgtttgggcggcaaatttgcaagcttgttttgtttaaaactggatttgctgtgcttgattgttgatgtcggaataggattttgcaactgggacaccttgttctgattcatggaggggttttttcatgttcgatctgtagctgttttatctagcgaacagttctaattcgttgatggcttgatgcttttctgtgttcagagtacttcagtttcaggctgtcaagtactccgtatatttctttcttgaagtttcagctcctgattttcattattcgtttcaactctattttaagtcttctttttaactgtttgatgtaccagtttcaagtctaagtacttcaactttttaattgcttaactatttggataattttgttgatggtgtactcttgaatcttgatctgtgtacttctgataaagacataaaggctcagctacacgttgcaatttttattagttaatgtactgttaaaaatctgcttttgtcggaaagtttctttcatgcttattggagtattttcttgatctaggcgcattccaaatggtttctgttggctcgttttggtgaagtactgaagtgtacaggttataggaagctgtgacctcgtttttgcccccctgtttagcttgctttagctacttgtttatccagttaagtgatgaactagtgttacttattatggcactatttatttaggattagttcaacgcgttcgtcctatttcccattgccatgtgccagtagacgacacgtgctgactgctgactagtattctttgtattgatcgtaggcagatatttcttcagaaatagacgtcgagccaaatacttgacaaccacatatagaaatacgagtaaactgtccgaaaacattattcacggtgaacaacccttttacagttttacagtattttatatatttcatatatatggaaattgtgggacaataaacttctggctgtcagcgatcatcagctctgttttagtgtgagtagggcaagtcttttttttgtgtgttatctgattaactcaattagttttcatcgggttgagaatagtcttctagaatttggtaggatgagatgtttctttcaacgaagacaccaattttgtcatctggtacctgagatttttcttggtcttctcaaatctaccatgtgtagaaaagagtggtcttttagttgttatcccttatttttctccttccaatttccaacaccgaatttggactggatcatgtgaaataacaattcaaatttgccctactactagtgatgttgcctctgtggaggaactttcgtgctgacaattaggcaaacccagcacactgtagtttaggaactcacaattttgatcaaattttcaaaccggaaatgtgtcctggaaagttaatgctgtagtttggattagatacagatgacaggcaagaagtagtgaccgaacacaaaataattacttgaatacctcgggtaccttccagatccatttaggtgtttatagcatagaaatccacaaacaagtgcagtcagtaattggacatatagcttccgctttctttcctattcaaaagggaaaatattgaatttatagctttgcagtgggtgatgaaaagttcgttgcaatcatctccatagcagctctaccacatcaaaacgcttgtaggtgtttttttggatgcattcagggttaacacttccagaaatagttctttcactgatttatattctacccaaagttgttcgtaagttttaaatcatggtgttgttattaattgttaacattggaaccattactatatcttatgcagaatttcctgaggaatagagaagttggagaattcgtgagtggggcattagctggtgctatgactaaagctgttcttgctcctctagaaactatcaggtattcactttacatccatcactgcattcatttactcacttctgtaacattgtcttcttttctgattacatggtttagttggcttggtgattaagtaggctcttggagtaccagctgcttttcttttttgctttgcttattttttgttggtacacttgaggagatttctagaattatgccttataaacataattgagatcagttctttaccattatgtttctcggctttgttgaacagtcgtatgcaccatttagttcaaatgttagaatcaaaatatagtagttgcttgattgtttcttttattatgaacaacggatatttactaacaaagtactcatagtcatataagcttaagcttagtcacaaaataaaaaaaaggagtggtcattttttttgtgtgtgtgtgtgttttacaaaaaaatattttcaatcgactgctgttgaattatgcattatgttacatggtgtctgatttcaggacaagaatggttgttggggtaggatcaaaacacatttttggtagttttgtggagatcgtcgaacaaaatggctggcaaggactctgggcaggtaatacaataaatatgcttcggattattccaactcaagcacttgagcttggcacatttgagtgtgtcaaaaggagcatgacagaagcacaagagaaatggaaggaagatgggtgcccaaatatacaaattggcaatttgaaaattgagctaccacttcacttgctctctccaattgctgttggtggtgcggctgctggaatagttagcaccttagtgtgccatcctcttgaggttcttaaggtacttcataatctacagcgtattaatggtctaaactatctgttggcttttccagctgtgaaaattggaattcatgatgtgttttatgctatatttcctttttaattaaactgtaggttttgtagttctatgttcaaagtagtgcaaaatactgacaaacttcaaaatagttttacgtagcttgagtctgattattttttatatctttctgctggcaagccatttatccatgtacatcagtctgatactctgatgttctatcataggaccgcctgactgtcaaccgtgaggcttatccaagtatcggccttgccttcaacaagatataccaaactgatggtattggtggtctctatgctggcctctgcccaacactagttggcatgcttccttatagcacctgctactatttcatgtatgagacgatcaagacttcttattgccgtgcacataaaaagaagtccttgagccgtcctgagctactcattattggagctctttcaggttagcattcagtgccacttcacctgctgattagaaattcactagctaacaatttaattcccaaaaattctgataaacctgagaaatgggataattcacgagaagtttagcatttgatttgagtatacccctcttttcacaattttgatgttggatcttctaggtctaactgcaagtacaataagcttccctctggaagtggcgaggaagcggcttatggttggaaccctgcaagggaaatgcccgccccacatgatcgcggccttagctgaggtgttccaagaggagggcatcaagggactttaccgcggatgggccgcaagctccctgaaggtgatgccgacctccggcattacctggatgttctatgaggcatggaaggacattcttttggctccagagctgcacacctagcactagcagtctagcatgcctggaattgttcaacatggcaggcattgctacagaataaatttcttgtgctgtgaggcagtgtgggatttccttcttttttttttcttctttgaaatcccacacatgccagtcatctagctaagaggccattttgtgccaatgattagaagcattagttaattggctttattcaacctggattgtttaagccagtaattgttgacaaggggggcagacattccatgccatgtggcttgagttatgcattgcccccaaaattctgtgaaattccccaagtaatgaagaaaagggggttaattccc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0520000, RefSeq:Os08g0520000