BGIOSGA001816

From RiceWiki
Revision as of 18:13, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA001816

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001816, complete gene.

LocusTag

P0682B08.30

Ensembl Transcript ID

BGIOSGA001816-TA

Ensembl Protein ID

BGIOSGA001816-PA

Length

4152

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12174784..12178935

Sequence Coding Region

12178657..12178935,12174784..12176019

Genome Context

<gbrowseImage1> name=IndicaChromosome01:12174784..12178935 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:12174784..12178935 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGCGCGCGGCGGCCACGGCGGCGCTCCGGCGCCTCCCACAGTCACAGGCCCCGAGGAGACAAGCGCGCGGTCTCCAGTACGCGAGCCCGGAGCGGCGACCGCTGGATGGTGCGAGGTGGGCGCTCTACGCGAGGCTGTCGGCGCACCTGCCGTCGGGTGGAATGGTGGAGGAGCTCGGCCGGTGGCTCCGCGAGAGGCGCCCGCTCTCGGAGGAGCAGGTCCTCTTCTGCGTCCGCAGGTTCCGCAAGTTCAAGCAGAACAAGCACGCCCTCCAGTTGATGGACTGGATGGAAGCTCGTGGAGTGAACTTGGAGCTCAAGCATCATGCTTTGCGGCTTGACCTTGTTAGCAAACTGAATGGTATACATGCTGCAGAAGAGTACTTCGGGAGCCTTCCAGATATTTTCAGGTCAAAGCAAACTTATTCCACTCTGCTTAACTGCTATGCTGAGCACCGGATGGCAGAGAAAGGCCTAGAACTCTATGAAAATATGAAAGCGATGAACATTGTTTCAGATATATTGGTGTACAACAATTTGATGTGCTTATACCTGAAGACAGATCAACCAGAGAAAATCCCCACTACAGTTGTAAAAATGCAAGAAAGTGGTATACAACCAAACAAGTTTTCATACTTTGTGCTAACAGAAAGCTACATTATGATGAATGACATAGAGTCCGCTGAGAAGGTCCTGAAAGAATTGCAGGAGGTAAATTCAGTTCCTTGGTCCTTGTATGCTACACTTGCTAACGGTTATAATAAGCTGCAGCAGTTTGACAAGGCAGAATTCACCCTTAAGAAAGCTGAGGAAGTTCTGGACAAGCATGACGTTTTCTCTTGGCATTGTCTTCTCTCCCACTATGCCAATTCCGGCAACTTGTCCGAGGTCAAGAGAATCTGGGAGTCTTTAAAGTCTGCATTCAAGAAATGCACAAATAGAAGCTATCTAGTGATGCTTAAAGCTCTGAAAAAGTTGGATGATTTTGACACCCTGCAGCAAATCTTTCAGGAATGGGAATCAAGCCATGAGCACTATGACATGAAAATACCAAATATTATCATCCAAGCTTACCTTGATAAGGGCATGGTAGACAAAGCTGAGGCTATGCGTCAGACAACCATGGCTCAGGATCATTCCAACTACAGAACATTTTGCATATTCGCAGAATTCTATTTGGAGAAATCTAAAATGAATGAGGCACTGCAGGTCTGGAAAGATGCAAAGAAAATGGTGAAGGGGCAGGATTGGGTGCCAGAAAAGCTTGTGAACAGATATCTGAAGCACTTTGAGGATTCAAAGGATGTGGATGGGATGGAGACGTTCTGTGAATGCCTGAAGAATCTCGGTCGCCTTGATGCTGAAGCCTATGAAGCCTTGATCCGGACCTATATATCTGTAGGTAGAACAAATCCATCCATCCCTCAGCGCATGGAAGTTGACAGGGTTGATATTCGGCCTGAAATGTTTGAATCGCTCAAAGCTATCTCCACTGAAGGAGTTGAGAGTTGA</cdnaseq>

Protein Sequence

<aaseq>MLRAAATAALRRLPQSQAPRRQARGLQYASPERRPLDGARWALYARLSAHLPSGGMVEELGRWLRERRPLSEEQVLFCVRRFRKFKQNKHALQLMDWMEARGVNLELKHHALRLDLVSKLNGIHAAEEYFGSLPDIFRSKQTYSTLLNCYAEHRMAEKGLELYENMKAMNIVSDILVYNNLMCLYLKTDQPEKIPTTVVKMQESGIQPNKFSYFVLTESYIMMNDIESAEKVLKELQEVNSVPWSLYATLANGYNKLQQFDKAEFTLKKAEEVLDKHDVFSWHCLLSHYANSGNLSEVKRIWESLKSAFKKCTNRSYLVMLKALKKLDDFDTLQQIFQEWESSHEHYDMKIPNIIIQAYLDKGMVDKAEAMRQTTMAQDHSNYRTFCIFAEFYLEKSKMNEALQVWKDAKKMVKGQDWVPEKLVNRYLKHFEDSKDVDGMETFCECLKNLGRLDAEAYEALIRTYISVGRTNPSIPQRMEVDRVDIRPEMFESLKAISTEGVES</aaseq>

Gene Sequence

<dnaseqindica>1..279#2917..4152#ATGCTGCGCGCGGCGGCCACGGCGGCGCTCCGGCGCCTCCCACAGTCACAGGCCCCGAGGAGACAAGCGCGCGGTCTCCAGTACGCGAGCCCGGAGCGGCGACCGCTGGATGGTGCGAGGTGGGCGCTCTACGCGAGGCTGTCGGCGCACCTGCCGTCGGGTGGAATGGTGGAGGAGCTCGGCCGGTGGCTCCGCGAGAGGCGCCCGCTCTCGGAGGAGCAGGTCCTCTTCTGCGTCCGCAGGTTCCGCAAGTTCAAGCAGAACAAGCACGCCCTCCAGGTGAGCCCCCTCACCCCCACACACACCCACCCCCAGACCCCAGTCCCCTCCCGCGAAAACTCTGGCTTAATTTGGATTGGGGATGTAATGGTAAGGTTTCAGTCGATTGGATCCGGTTGAAACTCCAATTGTTTCGTCCTATCTACACTGTATTTTAGGGGTAATTTTGTGTTTAACAACTCCGTTTGTAATATTATAGCATTTGCCAATATCTTAGGGAACTATAATGTACTAGTAGTAATCTAGCAGCATAATGTGTTTTCCCCGTTATTTCGAGAATTTGTTAAGGGAAACGCAGGCCAGAACTGAGAACCTATATTTGTTGATTCTTTAACGATTGTGACTGAACTGAATATTTGCTTCTGGTATTCCAAGAACTGTCATACTGGATTAAGCTTAATCCTACGCTTGATTAATGTATTGTAGAAGAGGGGAGAACTCAGAAGGTCCTTGTCTTGTTTAAAGTTAGTCTGTTTTTTGTTGGTCATATGGATCAAAATATATTTTACTGTGGATTTTTCTTCATGATCTTCAGACTACCTAAACTGCCTCTGTATAATTTGATGGATAATACGGAATGGTTGATGTATACCAAGACCAAGATGTTAACCATCAGGTTTCCATTTTTATGTGGAACTTTGCTTGCTTGTATAATTCCTTTTTTCAAAAAAAAAAATCCATATCCATATCCATATTGAAGCAGTTCAAGTGTGTTTTGATGTGCAGTGAGGACAGTACAGGAAAGAAACTACCTTTACTCAGCAATACACCCAGTAATGGGCTAACGGCAGAGGAAATATTGCCGATGGAGAAGAGCTGAACTGGCTCTCCCAAGTGGGCAAGCAGATGAAGAATGTCCAACTCGCACATGCCTGCTTCCTTTGTTTCTGTAGTGCAACCAAATGGGGAGCCCTGCTTCTCTTGGCTAAGCCCAAATGAGCTAGTTCGATCCAGTTTAACGATGCAAGATAAACCAGGGGTAGTCGTGTTAGTCATGTACCTGTGTTTTCCTAGGAGCTGTGTGTCCTTGATCTCTATGTATCACCCCATCAGGTTACATTAGCTCTGTACTACTAGTTGTTTTCCTCATAAATCTGACATGTTATCATGCCTATATCCTGAAATGGACTACATTAGCAATGCAGCAGTTTCCTTCTAAACCTAGCACACGTAACCCTCCTTGACTGATACCACCATTGTTTAGTAGGTCATTTTTCCACATTGGAGCTATGTGACAGGGAAGGGGCATAATACCTTTTCCGTTTACTGATTCAGTGTATGTGCTGGGGATTATATGCCATATTAGCAAAAACATACTACATCCATGGTAGAAATGGATCCGGCTTTAAATGCTTATTTTCTTAATCCTCTGTCCTCATAGTTCATGTGAATAATATTTGCTTTGCCCTTTAATCTTTCCTTGGATGCATTTATGTGATTCAGAATTCTGAAGCAACATTGCATTCCTTAAGTTTAAAGTAGTCTTAACTTGAGTTACTGAATTAGTTTTAGGTTGCTACCATTATCCTTCATTTTACTAAATTCAATGATATGTTTGATTCCTAGTTTAATTTATCATATGACATGTCATCACTCTTGCTCTTTAATAAGACCTTCCTTACAAATAGAAGAAAACTTGCCATTATCATCCTTATCTCTACTAGCTTTTGTACTAATGAATATATGCAGTCTCTCGCATCTTGTTTAATGCACACAACTGTCATAACAAGCTGTTATATTTTGCTCTGTTCGTCACAATGTATAGCTACCTTTAGCATTAAAATTTTATTCCAAAATATAGCTGCTACTTCATCACTTTCTCATCTCAACCAATCACAACCATCTCTCATTTAATTTCTTCATCTACTTTCTTCTTTCAACCAATCACAATCATCTCTCATTTAATTTCTCTACATACTTCTTCGTCTCAACCATATTTCATTTAATTTCTCTATCTACCACCTATCTCAACCAATCACAACCTTCATCCATTTAATTCTATATACTTTCATAATCTCCTTGAGAAGTCCTAAAGGTAGCTATATTTTTGGGAGGGAGGGAGTAGCTTTTACATAGTTTAGCAATAATCGTCTTCCATAAAACAGAGCCTGCAATCAACTGATTGTTTTTCATCACAGAAATTTGGTACAGTAACACTGTCAAACAAATAGTAATGGTATTGCTTACACTGCCACTGGTGAAGCAATGTTGGGTGGGTGGCAATATCTATTCGCTACACTGAGCGGTTGACCTAAATTGGAATGGCATGCTGTATTTGGTCTCAGTTCTTTTCTATCAAAAGCTTTGTGGGCTCCTTTGTGCTTATTACATTTCAACTTTGTGTGGTAACCACATAAAGATGTTCCTGTCACTTTGGTTATATATTTGTAATTGTATGTCCGATATAAACTGATGTCAATTTGTGTGATTTACTTTTTGTAATTTCGAGTCTTTTGCACCATTGCAATCATCAGAAAAGATAAATACTCTGTTTTACAGAACTGTTCTCTTTCCTTCAGGGTTCTGTATCATAAGAAACATTGAACATTCGAGTTGGGTTTTCTCCCTTTTGGGGGCAGCTGGGCAAGGTATTTTTCGTTGGCCATGTGATGACTGACCATGTTTTCATGTTTACAGTTGATGGACTGGATGGAAGCTCGTGGAGTGAACTTGGAGCTCAAGCATCATGCTTTGCGGCTTGACCTTGTTAGCAAACTGAATGGTATACATGCTGCAGAAGAGTACTTCGGGAGCCTTCCAGATATTTTCAGGTCAAAGCAAACTTATTCCACTCTGCTTAACTGCTATGCTGAGCACCGGATGGCAGAGAAAGGCCTAGAACTCTATGAAAATATGAAAGCGATGAACATTGTTTCAGATATATTGGTGTACAACAATTTGATGTGCTTATACCTGAAGACAGATCAACCAGAGAAAATCCCCACTACAGTTGTAAAAATGCAAGAAAGTGGTATACAACCAAACAAGTTTTCATACTTTGTGCTAACAGAAAGCTACATTATGATGAATGACATAGAGTCCGCTGAGAAGGTCCTGAAAGAATTGCAGGAGGTAAATTCAGTTCCTTGGTCCTTGTATGCTACACTTGCTAACGGTTATAATAAGCTGCAGCAGTTTGACAAGGCAGAATTCACCCTTAAGAAAGCTGAGGAAGTTCTGGACAAGCATGACGTTTTCTCTTGGCATTGTCTTCTCTCCCACTATGCCAATTCCGGCAACTTGTCCGAGGTCAAGAGAATCTGGGAGTCTTTAAAGTCTGCATTCAAGAAATGCACAAATAGAAGCTATCTAGTGATGCTTAAAGCTCTGAAAAAGTTGGATGATTTTGACACCCTGCAGCAAATCTTTCAGGAATGGGAATCAAGCCATGAGCACTATGACATGAAAATACCAAATATTATCATCCAAGCTTACCTTGATAAGGGCATGGTAGACAAAGCTGAGGCTATGCGTCAGACAACCATGGCTCAGGATCATTCCAACTACAGAACATTTTGCATATTCGCAGAATTCTATTTGGAGAAATCTAAAATGAATGAGGCACTGCAGGTCTGGAAAGATGCAAAGAAAATGGTGAAGGGGCAGGATTGGGTGCCAGAAAAGCTTGTGAACAGATATCTGAAGCACTTTGAGGATTCAAAGGATGTGGATGGGATGGAGACGTTCTGTGAATGCCTGAAGAATCTCGGTCGCCTTGATGCTGAAGCCTATGAAGCCTTGATCCGGACCTATATATCTGTAGGTAGAACAAATCCATCCATCCCTCAGCGCATGGAAGTTGACAGGGTTGATATTCGGCCTGAAATGTTTGAATCGCTCAAAGCTATCTCCACTGAAGGAGTTGAGAGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001816