Os08g0526100

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Revision as of 13:08, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0526100| Description = NAD-dependent epimerase/dehydratase family protein| Version = NM_001068830.1 GI:115477398 GeneID:4346094| Length = 1...")
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Gene Name

Os08g0526100

Description

NAD-dependent epimerase/dehydratase family protein

Version

NM_001068830.1 GI:115477398 GeneID:4346094

Length

1955 bp

Definition

Oryza sativa Japonica Group Os08g0526100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26253073..26255027

Sequence Coding Region

26253526..26254962

Expression

GEO Profiles:Os08g0526100

Genome Context

<gbrowseImage1> name=NC_008401:26253073..26255027 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:26253073..26255027 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgccgcactccggcgtggtggacgcggcggcgaagggggtgaagctggggggcggtggtggcggggcgctgatggtgcgccgggtggcgagcggcaagctcctgtcggcgtcgtcgcacctgctgttccgggcaaccatcctggcgacgctctgcctcgtctgcctcttcaccgtgcactacccgtcgctgctgtcccactccttccacctctcctccgccgccgccgccgcgaacgggaagcacagggcggcgtcgcggtcgtcgcaccggagcttgcttgggtcgtcggcggcggtggcgtatgggggcgcggcgtgggagaaggaggtgaggaggagcgcggcgccgaggagggacgggggcttgtcggtgctggtgacgggcgccgccgggttcgtcggcgcgcactgctcgctggcgctccgggcgcgcggggacggcgtggtggggctcgacaacttcaactcctactacgacccgtccctgaagcgggcgcggcagcgactgctggcgtcgcgcggcgtcgccgtgctcgacgccgacatcaacgacgccgcgctgctggagcggctgttcgacgcggcgcgcttcacgcacgtgctccacctcgccgcgcaggccggggtgcgctacgcgatgcgcgcgccgcagacgtacgtcgcgtccaacgtcgccggcctcgtcagcgtcttcgaggtcgccgccaagcacgccgacccgcagccggcgatcgtgtgggcgtcctcgtcgtcggtgtacgggctcaacaccgacgcgcccttctccgaggagcaccgcaccgaccggccggcgtcgctgtacgcggcgaccaagaaggccggcgaggccatcgcccacgcgtacaaccacatctacggcctctccatcaccggcctccgcttcttcaccgtgtacgggccgtggggccgccccgacatggcctacttctccttcgcccgcagcatcgtcgctggcgagcccatcacgctgttccgcaccgccgacggcgccgacgcgcgccgcgacttcacctacatcgacgacgtcgtcaagggctgcctcggcgcgctcgacacggccggcgagagcaccggcaccaagtccggcaagaagcgcggcccggcgccgctccgcgtctacaacctcggcaacacctcgccggtgccggtcacccgcatggtcgccatcctcgagaagctcctcggcaggaaggcgaacaagcgcgtcgtcaccatgcccagcaatggcgacgtgccgttcacccacgccaacgtcagccacgccgcgcgcgacttcggctaccgcccggcgacccccctcgacgccggcctccgccgcttcgtcgactggttcgtccactactacaagctcgacacggccaagatcgccaagggcaagaggaaatccatggccatgtccgccgcgtcgtga</cdnaseq>

Protein Sequence

<aaseq>MMPHSGVVDAAAKGVKLGGGGGGALMVRRVASGKLLSASSHLLF RATILATLCLVCLFTVHYPSLLSHSFHLSSAAAAANGKHRAASRSSHRSLLGSSAAVA YGGAAWEKEVRRSAAPRRDGGLSVLVTGAAGFVGAHCSLALRARGDGVVGLDNFNSYY DPSLKRARQRLLASRGVAVLDADINDAALLERLFDAARFTHVLHLAAQAGVRYAMRAP QTYVASNVAGLVSVFEVAAKHADPQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLY AATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFARSIVAGEPITLFR TADGADARRDFTYIDDVVKGCLGALDTAGESTGTKSGKKRGPAPLRVYNLGNTSPVPV TRMVAILEKLLGRKANKRVVTMPSNGDVPFTHANVSHAARDFGYRPATPLDAGLRRFV DWFVHYYKLDTAKIAKGKRKSMAMSAAS</aaseq>

Gene Sequence

<dnaseqindica>66..1502#actctcactctcacactctcgcgcacgcggtcgaacaccttggcagcaaacagcagcagcagcagatgatgccgcactccggcgtggtggacgcggcggcgaagggggtgaagctggggggcggtggtggcggggcgctgatggtgcgccgggtggcgagcggcaagctcctgtcggcgtcgtcgcacctgctgttccgggcaaccatcctggcgacgctctgcctcgtctgcctcttcaccgtgcactacccgtcgctgctgtcccactccttccacctctcctccgccgccgccgccgcgaacgggaagcacagggcggcgtcgcggtcgtcgcaccggagcttgcttgggtcgtcggcggcggtggcgtatgggggcgcggcgtgggagaaggaggtgaggaggagcgcggcgccgaggagggacgggggcttgtcggtgctggtgacgggcgccgccgggttcgtcggcgcgcactgctcgctggcgctccgggcgcgcggggacggcgtggtggggctcgacaacttcaactcctactacgacccgtccctgaagcgggcgcggcagcgactgctggcgtcgcgcggcgtcgccgtgctcgacgccgacatcaacgacgccgcgctgctggagcggctgttcgacgcggcgcgcttcacgcacgtgctccacctcgccgcgcaggccggggtgcgctacgcgatgcgcgcgccgcagacgtacgtcgcgtccaacgtcgccggcctcgtcagcgtcttcgaggtcgccgccaagcacgccgacccgcagccggcgatcgtgtgggcgtcctcgtcgtcggtgtacgggctcaacaccgacgcgcccttctccgaggagcaccgcaccgaccggccggcgtcgctgtacgcggcgaccaagaaggccggcgaggccatcgcccacgcgtacaaccacatctacggcctctccatcaccggcctccgcttcttcaccgtgtacgggccgtggggccgccccgacatggcctacttctccttcgcccgcagcatcgtcgctggcgagcccatcacgctgttccgcaccgccgacggcgccgacgcgcgccgcgacttcacctacatcgacgacgtcgtcaagggctgcctcggcgcgctcgacacggccggcgagagcaccggcaccaagtccggcaagaagcgcggcccggcgccgctccgcgtctacaacctcggcaacacctcgccggtgccggtcacccgcatggtcgccatcctcgagaagctcctcggcaggaaggcgaacaagcgcgtcgtcaccatgcccagcaatggcgacgtgccgttcacccacgccaacgtcagccacgccgcgcgcgacttcggctaccgcccggcgacccccctcgacgccggcctccgccgcttcgtcgactggttcgtccactactacaagctcgacacggccaagatcgccaagggcaagaggaaatccatggccatgtccgccgcgtcgtgacgtgtccacccaattgtccttggaggctagcactcgtcctgcaacttttttcagtgctaatttgtttaaaagattgctgctttgtttctccatgatggatgcaatcaaccatgctgaattttgcttatgctgcttaagcaaaatccatggctagtagagagaaaaagaaatggactggagtatagataagatgacagagcaaaaaaaggaaggagccagggcagaagaagaaagatgatgtcactggaatccttctggtttagaatattttcctctgaacttattcttttcagttaattaccatcttgttcttgttcatttggtctcatttggtgtgattcctgaatgatcatgccagcaacaagaacacaagatgctgtagtgggtgtaaatccaagcagcttcaggctgccataaaaaaatttatatatatactttaaattttggcggtgg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0526100, RefSeq:Os08g0526100