Os09g0441000

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Revision as of 07:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0441000| Description = Similar to SBT1 protein (Subtilisin-like protease)| Version = NM_001069818.2 GI:297609536 GeneID:4347174| Length = 3...")
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Gene Name

Os09g0441000

Description

Similar to SBT1 protein (Subtilisin-like protease)

Version

NM_001069818.2 GI:297609536 GeneID:4347174

Length

3150 bp

Definition

Oryza sativa Japonica Group Os09g0441000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17010418..17013567

Sequence Coding Region

17010448..17012136

Expression

GEO Profiles:Os09g0441000

Genome Context

<gbrowseImage1> name=NC_008402:17010418..17013567 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17010418..17013567 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcagccacccttcctcctcgctctagccgtcctcgtcgttgtctcgtcgtgcgtgcggctcgtctccggcgccggcgatggggcggcgacctacattgtctacctgaacccggcactcaagccggccccgtacgccactcacctacactggcaccacgcccacctggcctccctctccgtcgacccctcgcgtcatctcctctactcctacacctccgccgcgccgtcagccttcgccgcgcgcctcctgccgtcgcacgtcgcggcgctccgcggccaccccgccgtcgcgtccgtccatgaagacgtcatcctcccgctccacaccacgcgctcgcctctgttcctccacctcccgccgtacgacgcccctgacgccgacggtgcgagcaccgacgtcatcattggcgtgctcgacaccggcgtctggcccgagagccccagcttcggcgacgtcggcatgggcccggtgccttcgcggtggcgcgggagctgcgagaccaatgccaccgacttcccgtcgtcgatgtgcaaccgcaagctcatcggcgcccgcgccttcttccggggatatggggccggcggcggcgggaacggttcccacgtcagcctcgagttctcctcgccgagggaccacgacggtcacggcacgcacacggcgtcgacggcggccggcgccgtcgtggccgacgcgggactcctcggctacgcggaaggcacggcccgcggcatggcgcccggtgcgcgcgtcgcggcgtacaaggtgtgctggaggcaggggtgcttcagctccgacatactagccggcatggagaaggccatcgatgacggcgtcgacgttctctcgctgtctcttggcggcggcgcgttcccgctctcgcgtgaccccatcgcggtcggcgcgctcgcggccactcgccgcggcatcgtcgtggcgtgctccgcggggaacagtggtccttctccgtcgtcgctggtgaacactgctccgtgggtgatcaccgtcggtgcaggcacgctcgacaggaacttcccggcgtacgccgagctcgggaacggcgagacccacgccggcatgtcgctctactccggcgacgggctcggcgacgagaagctcccggtcgtgtacaacaaaggcatccgcgccggcagcaatgcgagcaagctctgcatggagggcacgctggacgcggcggcggtgaagggcaaggtggtcctgtgcgaccgcggcggcaactcgagggtggagaaggggctggtggtgaagcaggccggcggcgtcggtatggtgctcgcgaacaccgcgcagagcggcgaggaggtcgtggccgacagccaccttctccccgcggtggccgtcggcgccaagagcggcgacgccataaggaggtacgtggagtcggacgccgacgccgaggtggggctaaccttcgccggcacggcgctcgacgtgcggccggcgccggtggtggccgcgttcagctcgcgtgggccgaacaggcaggtggcgcagctgctcaagccggacgtgatcgggccgggggtgaacatcctcgccggctggacggggtccgtcgggccgaccgggctcaccgtcgacgagcggcggtcgccgttcaacatcttgtcaggtcagtgcacgctttgccccctccatgcaagtagccctgtacgtagactgtag</cdnaseq>

Protein Sequence

<aaseq>MQQPPFLLALAVLVVVSSCVRLVSGAGDGAATYIVYLNPALKPA PYATHLHWHHAHLASLSVDPSRHLLYSYTSAAPSAFAARLLPSHVAALRGHPAVASVH EDVILPLHTTRSPLFLHLPPYDAPDADGASTDVIIGVLDTGVWPESPSFGDVGMGPVP SRWRGSCETNATDFPSSMCNRKLIGARAFFRGYGAGGGGNGSHVSLEFSSPRDHDGHG THTASTAAGAVVADAGLLGYAEGTARGMAPGARVAAYKVCWRQGCFSSDILAGMEKAI DDGVDVLSLSLGGGAFPLSRDPIAVGALAATRRGIVVACSAGNSGPSPSSLVNTAPWV ITVGAGTLDRNFPAYAELGNGETHAGMSLYSGDGLGDEKLPVVYNKGIRAGSNASKLC MEGTLDAAAVKGKVVLCDRGGNSRVEKGLVVKQAGGVGMVLANTAQSGEEVVADSHLL PAVAVGAKSGDAIRRYVESDADAEVGLTFAGTALDVRPAPVVAAFSSRGPNRQVAQLL KPDVIGPGVNILAGWTGSVGPTGLTVDERRSPFNILSGQCTLCPLHASSPVRRL</aaseq>

Gene Sequence

<dnaseqindica>31..1719#aactccctccattcgctaacactgcccagcatgcagcagccacccttcctcctcgctctagccgtcctcgtcgttgtctcgtcgtgcgtgcggctcgtctccggcgccggcgatggggcggcgacctacattgtctacctgaacccggcactcaagccggccccgtacgccactcacctacactggcaccacgcccacctggcctccctctccgtcgacccctcgcgtcatctcctctactcctacacctccgccgcgccgtcagccttcgccgcgcgcctcctgccgtcgcacgtcgcggcgctccgcggccaccccgccgtcgcgtccgtccatgaagacgtcatcctcccgctccacaccacgcgctcgcctctgttcctccacctcccgccgtacgacgcccctgacgccgacggtgcgagcaccgacgtcatcattggcgtgctcgacaccggcgtctggcccgagagccccagcttcggcgacgtcggcatgggcccggtgccttcgcggtggcgcgggagctgcgagaccaatgccaccgacttcccgtcgtcgatgtgcaaccgcaagctcatcggcgcccgcgccttcttccggggatatggggccggcggcggcgggaacggttcccacgtcagcctcgagttctcctcgccgagggaccacgacggtcacggcacgcacacggcgtcgacggcggccggcgccgtcgtggccgacgcgggactcctcggctacgcggaaggcacggcccgcggcatggcgcccggtgcgcgcgtcgcggcgtacaaggtgtgctggaggcaggggtgcttcagctccgacatactagccggcatggagaaggccatcgatgacggcgtcgacgttctctcgctgtctcttggcggcggcgcgttcccgctctcgcgtgaccccatcgcggtcggcgcgctcgcggccactcgccgcggcatcgtcgtggcgtgctccgcggggaacagtggtccttctccgtcgtcgctggtgaacactgctccgtgggtgatcaccgtcggtgcaggcacgctcgacaggaacttcccggcgtacgccgagctcgggaacggcgagacccacgccggcatgtcgctctactccggcgacgggctcggcgacgagaagctcccggtcgtgtacaacaaaggcatccgcgccggcagcaatgcgagcaagctctgcatggagggcacgctggacgcggcggcggtgaagggcaaggtggtcctgtgcgaccgcggcggcaactcgagggtggagaaggggctggtggtgaagcaggccggcggcgtcggtatggtgctcgcgaacaccgcgcagagcggcgaggaggtcgtggccgacagccaccttctccccgcggtggccgtcggcgccaagagcggcgacgccataaggaggtacgtggagtcggacgccgacgccgaggtggggctaaccttcgccggcacggcgctcgacgtgcggccggcgccggtggtggccgcgttcagctcgcgtgggccgaacaggcaggtggcgcagctgctcaagccggacgtgatcgggccgggggtgaacatcctcgccggctggacggggtccgtcgggccgaccgggctcaccgtcgacgagcggcggtcgccgttcaacatcttgtcaggtcagtgcacgctttgccccctccatgcaagtagccctgtacgtagactgtagtataccgactgaaagtatgttgcttactctaattagtaattagtgtgttgcaccgaaagttcgagcacggactttacggtccggcgtgctcgagaatagatcagtaccagctaacagtagctgtttgatgccgttatgatcatatttggtcatgatggtgctgtttagctttcaagtgctgtagtgcagttcgcatgcacccaaatggcatgatatgctcgacagtcggcatgactttagttgcacgatattctgacatgtgtctggctatgtctctctttttttgcactgaaccttggtagtagattcgtaatttacattgctgaaagctgcactctcagcttaattatatattttgagccataaaattaactagagtgattaaagactcaatcgtgatatcgcaggaacatccatgtcatgcccgcacatcagcggcctcgccgccttcgtcaaggcggcacacccggactggagccccagcgcaatcaagtcggcgctcatgaccaccgcatacaccgtcgacaacaccggctcgccgatcgtcgacgccgccagcaacaccacggcgacgccgtggtccatcggcgccggccacgtggaccccgtcaaggccctctccccgggcctcgtctacgacacctccgtcgacgactacgtcgccttcctgtgctccgtcggcacgtcgccgccgcaggtccaggccatcacggcggcgcccaacgtgacgtgccagcggaagctgtccagccccggggacctcaactacccgtcgttctccgtcgtgttcggccggcggtcgtcgtcgtcgcgcagcaccaccgtcaagtaccggcgcgagctgaccaacgtcggcgacggcaggtcggtgtacaccgcgagggtcaccgggccgagcgacatagccgtggccgtgaagccggcgaggctcgcgttcaagaaggccggggacaagctgaggtacaccgtgacgttcaagtcgacgacgcccggtggcccgacggacgccgcgttcgggtggctgacctggagcaacggcgagcacgacgtgcgcagcccgatatcgtacacgtgggggatgtgacacgtatcgattattacgggcttacggcgattaattaaccagcatgctaacatgacgggcaagatgggagattggaagtgttcgaccggaggctggaagaattctggcttcgtttatgtgttgctatgttggttgtcctggcaagctagctgggcgcgcggtcatcggtatgtgttatccggtgatatctttcagctttatgagtttcccaaagagggattataaggccgctctagttcgtcgccgtcagctggctcccggtgtagctaattttacttcacggtgttgtacttctgttaatcacggcgaagcaaagaaaataagagacatgacatgtacgtcgatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0441000, RefSeq:Os09g0441000