Os08g0526700

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Revision as of 13:09, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0526700| Description = UBA-like domain containing protein| Version = NM_001068835.2 GI:297608868 GeneID:4346099| Length = 7187 bp| Definit...")
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Gene Name

Os08g0526700

Description

UBA-like domain containing protein

Version

NM_001068835.2 GI:297608868 GeneID:4346099

Length

7187 bp

Definition

Oryza sativa Japonica Group Os08g0526700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26300814..26308000

Sequence Coding Region

26300814..26300917,26302410..26302504,26302701..26302777,26303018..26303088,26303695..26303749
,26304373..26304434,26304519..26304600,26305317..26305387,26305464..26305545
,26306006..26306080,26306155..26306229,26306541..26306660,26306770..26306948
,26307850..26308000

Expression

GEO Profiles:Os08g0526700

Genome Context

<gbrowseImage1> name=NC_008401:26300814..26308000 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:26300814..26308000 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctagcagagtcgggggtggggcaacgatcggcatctctgcttggcggcggagattgcaagcgttcagccggcgacgaggttgtccgccgctcatgctcgccgatggctaccccacaattggacaagagaattcttagcgaacttgaacttatgggattccctactgctcgttcaattagggcactccatttttctggtaattccagtcttgaatctgcaataaactggcttctggaacatgaaaatgatccagacattgatcagctaccactgattccaagagaaatcaacattgaatgtggtgatacaccaaatgaagcgagaaatgacattcaaggaatgagggctgatgcccaggagagtaaaccagaagagtcaacagcagctggaagacagaaggaaacatcacaggtagaaagagaacttaatgcagatcaaaacgaggacgaagtcagaaggaggatcatagaattgttcaagtcaaaacaggatggtcaagaaagagaaagaggtagaatccggaatcaattacaagaggataagagggagaggattcgagctgctaaagatcttatggaagcaaagaggactcttgaggaaaatcaaagaaaacgtgtgatggagagtcgaaaagcagatcaagaggaggagaaaagaacaagagagagaatccggaagcgtattgaagatgataaggcagaaagaaggcgaaggcttggtttgccaatggaaaacccagtagcttcagtcccaaccttaactccaacgaagataaaacctgttgaacctgctgtgtcaccagaacaactgagagactgcctacgaaatctgaaaaagaattacaaggatgacactactaaagtcacaagagcattccaaatactgctgaagataattgccaacatagtgaagaacccagaagaggagaagttcaggaggattcgactaaacaatcctgttttcaaggaaagagtgggcaatttgcaaggaggcgtagaattcctggagctgtgcggattcatgaagctcgcgatcagcggctacctggtaatgccgagggataatatcaacttggcacttctcaatgctgctggagttgaggtagcatctgcaatggaaaacccctactttggcctactctccaatctcctggaagagaagagtgaagagaaggatagtgtggaggcaggggaccagcttactctgaagtctgaagagaattgggagattgcttcttgtcttgttgacaagctgcttctgctgctgctgatactgataatgatgagttggttctaa</cdnaseq>

Protein Sequence

<aaseq>MLAESGVGQRSASLLGGGDCKRSAGDEVVRRSCSPMATPQLDKR ILSELELMGFPTARSIRALHFSGNSSLESAINWLLEHENDPDIDQLPLIPREINIECG DTPNEARNDIQGMRADAQESKPEESTAAGRQKETSQVERELNADQNEDEVRRRIIELF KSKQDGQERERGRIRNQLQEDKRERIRAAKDLMEAKRTLEENQRKRVMESRKADQEEE KRTRERIRKRIEDDKAERRRRLGLPMENPVASVPTLTPTKIKPVEPAVSPEQLRDCLR NLKKNYKDDTTKVTRAFQILLKIIANIVKNPEEEKFRRIRLNNPVFKERVGNLQGGVE FLELCGFMKLAISGYLVMPRDNINLALLNAAGVEVASAMENPYFGLLSNLLEEKSEEK DSVEAGDQLTLKSEENWEIASCLVDKLLLLLLILIMMSWF</aaseq>

Gene Sequence

<dnaseqindica>1..104#1597..1691#1888..1964#2205..2275#2882..2936#3560..3621#3706..3787#4504..4574#4651..4732#5193..5267#5342..5416#5728..5847#5957..6135#7037..7187#atgctagcagagtcgggggtggggcaacgatcggcatctctgcttggcggcggagattgcaagcgttcagccggcgacgaggttgtccgccgctcatgctcgccgtatagttcttgttgcctttgtttatgggtcgaagtagtggtcacataggaatggggattttaattccaaatgtttgtgcctgcaagttaaagggttttcgctgctaattataatatactcctataagacaatgcaatgcagcttccttgacgaaagcactagttcttgagatggtgaattggtgatggcacgataggctttggcgatatgtgcaatataagattggtcattctaaagggaattatggttttgctcttggaagtcttacatacactttaaattgctttcttatgtgtttttggacagttttgggatccatgaacagcataatgtggctgcactggtgcaacagttagtatggacaacagtcggtgattcatcaagcatggggcagcagctgcaatggcatggccgtgctcaaggaaacaaagctaacctatgtcccatcttttgaagcactgctacaaaattgcaaattgaaatttactcctcattagtcccatttcctgctgagttgttgccttattggtcttcctagtgatttattatgagcttttcaccccagaagaggttactgatccagctgtaagcatggtgttgattcaagaggaaacttaagtaggaagaaaggtataagtaaccgcaggaaggaagatgtcactagagtctcctgaggtccaaagaaccatctgggaagaaaagataagaatgaagtgcagaagaagcaaaagctctgatcctcctcaaataattttcttacttccttctgcatttggagtaatgcattgctttctgcactacttatagaggattcgtacagccacctgggtccaaagtttgaaagtgaaaagaaattttgaaaaggtaagaaattctgttcaccattcatcttgttcatgcagtcgaaaactttcaacattttcctttgatgttctgtcaagataacctggaaaatgctttgattatttcgcccaactacttgaatcctatgttttgctgtttctaccatattaccatcctgtaagtatgcacaggtgtgatgccaaattatgcaaatgtctcagccttcttcagttccctaactgtgccataatagcctgtaattctagactatgcttaccaggcagttttccgttctcctattcaaccaagaatgataattacacaaataggctatggaatgagatcagtgcgtggacagattgtagacattaaacttcagaatgttgtaactttactaaacatgagttagaagtatttgcatatagatcactccaaagatatctcaacttcactttactggtaacatttgctaattctttgtccttaaaaaggctagttcgcaatttagatctttaatttttatgggagatctagcttcaagtgtaccaacttttctcatgaggataacatttcattcctattttgttctaattttgcatttatggtcagtagaatgctcttattcttattcatatatgtatcttctaggatggctaccccacaattggacaagagaattcttagcgaacttgaacttatgggattccctactgctcgttcaattagggcactccatttttctggtatgtctatttcaaaaggaatacaaggtagacatattgtaataaactattttatggtaggctgaatggcatagtattcaattagaacagtaaaggatatttaatttcgtctatggttgcatggctgtaatcctgtttgtgaatttcttcaacacatatccgaatcggtttggttaaaacaatcggtctttatcaggtaattccagtcttgaatctgcaataaactggcttctggaacatgaaaatgatccagacattgatcagctaccactggtatgttatttataaaaaaataactgttcaacatgagttcattgaaatatgcattgttctgtaattggtggaataattatcaatcgggaaacctatcagaagtttttcacttcaagcattttaaaagagagcttccctctatatcagttacatacttacatagtattgcacattgtcatgtaaaatagtgcttttgttaattttcaccttttgttctgagtacttgctttcattttctagattccaagagaaatcaacattgaatgtggtgatacaccaaatgaagcgagaaatgacattcaaggaatgaggtcagctcttatttcttaaatggtttcagatgagagctgataaaatatcagagtattatttcagggaaaaggcatttttttccttccctgttacatagctacgtaatcaatcaagaaatctgcactctacatatccactgtatttttcatatggcaacagccagatatgtcctagtaatgctgtaggttcagaatctgatatacctcaagaaacaagtgtcttattggggatgccttacaagagcaattgcacatttgacctttggtactgctattataattgtaaaatgattgctatatggacctgtcctttagcctgtgcatttgataaatccgaacagttctgatgttatccattagttctcctaactggtacaagtacactgtatgtgttgatttcaccatgcatttttatcatgccatatgccattgtcaaatactttatgttacaaaatacaaacaagtggagacaaaaggcaccatctgttaatccatatagatttgtgaaacttgtatactcaagtaactcaaagaatgtatgatcgcattcttttcttcgatatgtgctgcactgtaaaatgtgtaataggcatggttgttttgtagggctgatgcccaggagagtaaaccagaagagtcaacagcagctggaagacagaaggtttactcagagaacttcctaattttgacaccttaaccattttccattacatcagtgtgttatggacaaaccctttattgttatacttgaaggagtaaaacctgcaaagtgcatcatgttgaggcaactcttataggaaaggttaaacaaggtggcaatttgcatcagtttcttttccaattttgtcagaacacatcctcagattctaatagtacactggactagaagttgtgcataagaacatacaaggggcaatagcaaatatattcccttatccttgtctcaaaattgtacttgatttgcatatcctgtttagtagtctagtgttattacattagacaatttgggtcattgttagatctgcttacagcatagttagacagaaaattaaggaatatttcagtataatttgcaaatttatatgattgaccaaagatattggtcaattagtgggctactttactttcgttgttactgcctaatgtgaaggatgccaatatggaacccatttcactttctagcagtttgtttttctacctgattaattgatctggattctgcagccagtgctttatactttcataaactgttgtcacacctcacacctgaacttcctgtatcaggaaacatcacaggtagaaagagaacttaatgcagatcaaaacgaggacgaagtcagaaggaggtatgtaatttgctttggacagatatcatgtctttgatgatattgtttatcgttctggtaagtctagcgtgcgtgccgtttcaggatcatagaattgttcaagtcaaaacaggatggtcaagaaagagaaagaggtagaatccggaatcaattacaagaggataaggtctgataaaacaaaatacacttttttgggtcttatttttcatctcacttcattttggtaaccacgcaataaatccatgctggcctgcactgtccccctttgggatgccatatgcatgtgatatgctgccttaagcccttgaagcagaaagctaccaaaaagtgttaggcaaattaaatgggaactattcatatgttccctatcatgtttttttacagcatattcctcatccctaattgttactggatggttgttgaagcatcataattgaaggctatagtacgacatgactggaatactatttgttaagaaacaacaagatgtttttttacagcatattcctcatccctatttgttactggatggttgttgaagcaccataattgaaggctatagtacgacatgactggaatactatttgttaagaaacaacaagacattgtctctttgaaattttttatttgattgcaagaatggaaatctattgtgataaacgtatatattatgctaactaacaactgaatcatatagtatgctaactaacaagtgaaccatatagtctacatgatacaaccgataataacatatactgtggtctacaatgtgtagtgcccctgtgctgacatcattttttttctgagagagattgttggactgcatcacatccttcagcatttcttgtcatgcaaaacttacttttgtcatacattgtgaagagggagaggattcgagctgctaaagatcttatggaagcaaagaggactcttgaggaaaatcaaagaaaacggtttgtttcatatgcaacttgtatgtgatattccaacttaagggtgcttacttaagacacggtttttttagtgcagtgtgatggagagtcgaaaagcagatcaagaggaggagaaaagaacaagagagagaatccggaagcgtattgaagatgataaggtccccctgatccaatggttttaacttttttttttaacttcaaaatttcccttcatcagtttttttttcagttcaatccaattgttttctaggatagttcaatctcctggtgccctcacaattgttcatttaaagtatggctatctgaaaccgtaaattcattgatcattgtaattgtctttttattgttattggatttccacattgactatgttattgccatgtatatcacctcagaccacagtcatatgcattagtacagcctacattttacaattgcagttcattgcatgacctccaaacaaccagctagttcaatgatgacattgcttattgccatagtgtgattacactattactccatgaccagagtgacatgattttagtacgcttcaatcagtgacatgctatgttacttgttgaagtaccaaagagccttaaatccttatctcctatgcaggcagaaagaaggcgaaggcttggtttgccaatggaaaacccagtagcttcagtcccaaccttaactccaacgaaggtctaaaatttccagagcacctctatttttcatgcgaccttgaaacaacatttctcacctttttagctcctcagataaaacctgttgaacctgctgtgtcaccagaacaactgagagactgcctacgaaatctgaaaaagaattacaaggtaaaacagtattctgattgcagatacgaattatgcctgcgatcattttgacaccgaagcattgagctattgactgttactggacactgttgatatgatgcttcgtaaacacaattgtagtttatcgtatatatgttcttccacatcatcgttcagagaaaatgttgatatgttctcaaaagctcaccctcgtagaatccaacaatttgtgcctcataaatgcaaaatagcattgcgttaggcagcaaaactcttgtgtcatgtttcagataccgtttcatgagttacatacatatcaactttatttgtaggatgacactactaaagtcacaagagcattccaaatactgctgaagataattgccaacatagtgaagaacccagaagaggagaagttcaggaggattcgactaaacaatcctgttttcaaggtaactatgaaaagcgatgtgcaaggaggcatagaattccttaattatttcataaaaactttttcattcatttctcttatcctgaatccaccattctcctcttaaacaggaaagagtgggcaatttgcaaggaggcgtagaattcctggagctgtgcggattcatgaagctcgcgatcagcggctacctggtaatgccgagggataatatcaacttggcacttctcaatgctgctggagttgaggtagcatctgcaatggaaaacccctactttggcctactctccaagtgaatggaagatcctttcggctacttcatcatgaggaggcagctggtgctgctgcttctctacatcgtacaatcctcctactagtgatcagtgaatggccgccactacaatgggtccatcacagctgctagaatctgtttcctgtcgccaacattcgtgtacgatatctctcggttaatttggaactaacgacagatctaacacctgggtaaaaaacactggtgcttctcaagttgtaacgcatacgatgtgtcatgtgtatgttcatccaggaggaataaaaaatgaaaaatatatacatcacctgcaatgctgttatggtaactacagtaagttgcattggtttctctcgttactgactgaatgacaagcagatcagggccatccatccatataaatggacaggtagctttgtctcaaaatttatagccatctcaaagaaatcaatagagagggaaaaagatcaaatacccattgttaatagaaaactagtattgtcagtggtagataaatggtatcgaatggataaaatttctcgatttgtggacaggtggtagataaaagaatagaaacaactcattttaaggataaattttgaactctaaaaatcgaacatttatttttttttgcaactgagggagtatgtcactgttgcttgtggagagaaacattaattggcatctgtcctcaagggagataggaatgaaagatgaaagaaagaaagggagaggtgtgctaggtcagctgcattgctgcttgccggcacatgacatgcttggctcaactgtactgtctctactgtacttggtgggcttcaattctggcagatgagaattgagatgtgagaggagccgtcatctcatctcacttccttccttgctggtccctcctctctactagtctcctggaagagaagagtgaagagaaggatagtgtggaggcaggggaccagcttactctgaagtctgaagagaattgggagattgcttcttgtcttgttgacaagctgcttctgctgctgctgatactgataatgatgagttggttctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0526700, RefSeq:Os08g0526700