Os08g0528500

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Revision as of 13:09, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0528500| Description = Protein of unknown function UPF0016 family protein| Version = NM_001068847.1 GI:115477432 GeneID:4346111| Length = 2...")
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Gene Name

Os08g0528500

Description

Protein of unknown function UPF0016 family protein

Version

NM_001068847.1 GI:115477432 GeneID:4346111

Length

2936 bp

Definition

Oryza sativa Japonica Group Os08g0528500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26395449..26398384

Sequence Coding Region

26395542..26395730,26395845..26395904,26396097..26396180,26396657..26396742,26397359..26397431
,26397534..26397632,26397773..26397886,26397998..26398054,26398155..26398241

Expression

GEO Profiles:Os08g0528500

Genome Context

<gbrowseImage1> name=NC_008401:26395449..26398384 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:26395449..26398384 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctagacgcgtcagcaccacccgcctcctcctcctcctcctcctcgtcgccgccgcggcggcggcggcggcggccggagaccaggaggacccgcgtggcggcggcgacaacggcaccgcccgcttggatcgccgcaccaagatgttcctgcacgcggcgcgggcgagcgacggcggcgccacggggatggagaaggccgggctgggtctcttcgacgccttcttcgctagcttgtccatgattctggtcagcgagattggggatgagaccttcatcatcgccgcgctgatggcgatgcgccaccccaaatccaccgtgctctcaggcgctctgtcggcgctggtcgttatgaccatcttgtccaccgggcttggcagaatcgttccaaatttgatatccaggaagcacactaacagcgcagcaactgtcctttatgcgttctttgggctacggctgctgtacattgcttggaggtcagattctaaggcatcacaaaagaaggaaattgaagaagtagaggaaaagctggaagcaggacaagggaaatcaacatttagacgcatcttctcaaggttctgtactcctatttttttggagtcgtttgtgttgaccttcctggcggagtggggcgaccgaagtcagattgccacaattgcgttggccactcacaaaaatgcggtaggggtcgctgtgggagcaaccttggggcacaccatctgcacatcgttcgctgtggtgggtggcagcatgctggcatccaagatatctcagggcacagtggccaccattggaggcctcctcttccttggcttctctctgtcatcatatttctacccaccattgtga</cdnaseq>

Protein Sequence

<aaseq>MARRVSTTRLLLLLLLVAAAAAAAAAGDQEDPRGGGDNGTARLD RRTKMFLHAARASDGGATGMEKAGLGLFDAFFASLSMILVSEIGDETFIIAALMAMRH PKSTVLSGALSALVVMTILSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRS DSKASQKKEIEEVEEKLEAGQGKSTFRRIFSRFCTPIFLESFVLTFLAEWGDRSQIAT IALATHKNAVGVAVGATLGHTICTSFAVVGGSMLASKISQGTVATIGGLLFLGFSLSS YFYPPL</aaseq>

Gene Sequence

<dnaseqindica>2655..2843#2481..2540#2205..2288#1643..1728#954..1026#753..851#499..612#331..387#144..230#aatccatctcaaacactggcgcgtcggcggtcagtggcccgtccactcggcccctcctctttttaactctctctctctctctctccggccgccaccccctcgccgcgccgacgtctcgcctccgccgcctcgttctcgttccgatggctagacgcgtcagcaccacccgcctcctcctcctcctcctcctcgtcgccgccgcggcggcggcggcggcggccggagaccaggtcagcattccaccctcgcctctcctcgcgccccgcgcaccacctcttgtctctcgcactctatctaaaccctgcgtcgtggttcatctcctttctccaggaggacccgcgtggcggcggcgacaacggcaccgcccgcttggatcgccgcaccaaggtgaggagctaggacccgcgcgtgtgcgtctgtttcgatgtccggattctgttcttggagctgtgggggttggtggtaatctcatcgaggcactggcgatccccgtcacagatgttcctgcacgcggcgcgggcgagcgacggcggcgccacggggatggagaaggccgggctgggtctcttcgacgccttcttcgctagcttgtccatgattctggtcagcgaggtagtaggtgacatttcgggatggaaattaattagtcttactactctagctgctctgaatttgcttttttctttttgtatctgtatctgtggagtgatcacttaacttagtgttgcttgtttatgcattgcttggtgaagattggggatgagaccttcatcatcgccgcgctgatggcgatgcgccaccccaaatccaccgtgctctcaggcgctctgtcggcgctggtcgttatgaccgtaggtgaaactgcagcttgcagatgcagcggttgtctgtcaaggcaagattgggctgcagtgtagagtctaactaatccttacttggctctactgttgtagatcttgtccaccgggcttggcagaatcgttccaaatttgatatccaggaagcacactaacagcgcagcaactggtatgactgatctgattgctacattattgcgccgtgataaagcctagtatgaagtgatgtgttagatttttctattgaattatgtatcacgagcctggaagtcggagaaaagtgatcgaatcatcataataaattaagtggtatggttaattgctccaaaagcatctacagacatacaaacattattaagactgtagtactggatttattgtttcaagttttcgtactatactgctgtgcactagatagtcagcattgccatagttatcaagggaccattgtcagaaaatcagatgttacagtttcacagtacatcacatgaaagttcagacatttaggcatgcacccgcattggctactagttgcttcaaaaacagtgtcccttagatatagaaacaaatagaagctgtttgaaatctcatgctacggtaattaaagatatatgcttttctaccgacttaaaaggagtccaagggcctccacattggtatagaaaagttccctaagaaaccaactcctctttggcatcccaactgtttgcatgccatccagttaattttaacaattcaccgtgctcacctaatattttgtatcctctttggtattttgtactcagtcctttatgcgttctttgggctacggctgctgtacattgcttggaggtcagattctaaggcatcacaaaagaaggaaattgaagaagtacgcacattttattacatttactctttgcctctacagatttgcattagcatttttcttttgacagaaaactgcattagcttaatattgttagtttatattttgttgcgttaattttatccttttttgtgcatattcagtatactagaatctctaatttgcagcatctattgttgttgtatccagtgtaactgaatatctcttggagctttctgactttggattactctctgctggaccaatttcagcatttctttgccctgttgtgcttaaaaaatagaactagactgctgaagatatttagttatttgggaagatacatgtttactgtattgaactattggtagtccttttaattactattatttggttgtttatattatgcattataattggctctgacctttgatatcgtccaattgtttggtatgctacttgaaccatcttatatattttgaatcccttgacatacacaggtagaggaaaagctggaagcaggacaagggaaatcaacatttagacgcatcttctcaaggttctgtactcctatttttttggaggtacattccgctcttatcgttataaattttggtgcttcttggcaaaagtgcatttgctgccatctgatttcagatggatactgaattatcaaacactcactttttaccaacaaatggttgataaacacgtgatccaatttgtgtctttttaaatgaattcatccaatgtgtatgaacgacttgaaaatgcagtcgtttgtgttgaccttcctggcggagtggggcgaccgaagtcagattgccacaattgcggtaaggcctacccccttttcagcaattttccaacacttctcttcttgctcaattccccagcacttcttttcttgttcacaaaccgtaaacttgttgcatttcttgccaatgcagttggccactcacaaaaatgcggtaggggtcgctgtgggagcaaccttggggcacaccatctgcacatcgttcgctgtggtgggtggcagcatgctggcatccaagatatctcagggcacagtggccaccattggaggcctcctcttccttggcttctctctgtcatcatatttctacccaccattgtgaattttgtgatgaactgatgacatcctaccaagggggtgtatattccgttgcagccaagcatgctggcttgaaatataaacgcaggcgctacat</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0528500, RefSeq:Os08g0528500