BGIOSGA002220
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
BGIOSGA002220 |
|---|---|
| Description |
NAC-type transcription factor |
| Definition |
Oryza sativa Indica Group BGIOSGA002220, complete gene. |
| LocusTag |
P0710E05.32-1 |
| Ensembl Transcript ID |
BGIOSGA002220-TA |
| Ensembl Protein ID |
BGIOSGA002220-PA |
| Length |
5734 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:5263803..5269536 |
| Sequence Coding Region |
5269456..5269536,5269148..5269339),complement(5268818..5268995,5267690..5268279),complement(5266662..5266916 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome01:5263803..5269536 source=RiceIndica01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome01:5263803..5269536 source=RiceIndica01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGTACACCTCTCCCACACTCCTTGCTCTCTCGTTTGCTCTTCTACTGCTCATCCTCCTCCTCTACTACTCGTCCTCTTTGCTCTATTCACAGCTAGCAACAAGAAGGAGGCTTACACATGCATGTGCACGGTCTCTGCCGGACGCATATGAATCAGGCATGAATAGGGGGCACATCAGCAGCTCGGAGCTCATCGACGCCAAGCTCGAGGAACGCCGGATCTCCACGGCCAAGCACTGCCCCAGCTGCGGCAACAAGCTCGACTGCAAACCGGATTGGGTGGGGCTACCGGCAGGAGTCAAGTTCGATCCGACGGACCAGGAGTTGATCGAGCACCTCGAGGCCAAAGTGAGGGAAGAAGGCTCAAGATCTCATCCTCTCATCGATGAGTTCATACCCACGATAGAAGGGGAGGACGGCATATGCTACACCCACCCTGAGAAACTTCCAGGTGTGACAAGGGACGGCCTGAGCAAGCACTTCTTCCACCGGCCGTCGAAGGCGTACACGACGGGGACGAGGAAGCGGCGGAAGATCCAGACGGAGTGCGACGTGCAGAAGGGGGAGACGAGGTGGCACAAGACCGGCAAGACCCGGCCGGTGATGGTGAGCGGCCGGCAGAAGGGGTGCAAGAAGATACTGGTCCTCTACACCAACTTCGGCAAGCACCGCAAGCCGGAGAAGACCAACTGGGTGATGCACCAGTACCACCTCGGCGACCTCGAGGAGGAGAAGGAAGGGGAGCTCGTCGTCTGCAAGATCTTCTACCAGACGCAGCCTCGGCAGTGCAGCTGGTCCTCCGACCGCGGCGGCGGCGCCGCCGCCACCGCATCCGCCGTGACGACGGCGGCGGTGCAACAGGATCAGCAGCGCAGGAGGGACAGCGGCAGCGGCAGCTGCTCGTCGACGAGGGACCACGAGGTGTCGGCGACGTCCTACTCGACGGCCGGGTACGCCGTCGCCGCCGCCGTCGAGATGCAGCATTTGAAGCATGCCGCCGACCATTTCAGCTTCGCGCCTTTCAGGAAGAGTTTCGAGGAGGTTGGTATAAGTGGTGATCAGGTACACTCCAATCAGCTTGGGAGGTCGGAGCAGCAGCATGCTGGCCAGGAACAACAGCCGCACCGGCCGTTGCTTGCAACCACGACGGCGGTGCCTGCCACGGCCTTCCTGATCAGCCGGCCGACGAACCCTGTATCAAATATAGTGCCACCAGCAATGCAGCATGCATCTGTCGTTCTTGATCATGATCAGTTCCACGTGCCAGCAATCCTTCTCCACCACGACAAATTTCAGCAGCAGCAGCAACAAAAGCTTGACAGGAGGTCTGCCGGCTTGGAGGAACTGATAATGGGCTGCACGTCTTCGAGCACAAAAGGAGAAGCTTCAATTCCTCACTCCCAAGAGACAGAATGGCCTTACCAGCCATACTGGACTCCTGACAACCAGGATCATCATGGATAG</cdnaseq> |
| Protein Sequence |
<aaseq>MYTSPTLLALSFALLLLILLLYYSSSLLYSQLATRRRLTHACARSLPDAYESGMNRGHISSSELIDAKLEERRISTAKHCPSCGNKLDCKPDWVGLPAGVKFDPTDQELIEHLEAKVREEGSRSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSKHFFHRPSKAYTTGTRKRRKIQTECDVQKGETRWHKTGKTRPVMVSGRQKGCKKILVLYTNFGKHRKPEKTNWVMHQYHLGDLEEEKEGELVVCKIFYQTQPRQCSWSSDRGGGAAATASAVTTAAVQQDQQRRRDSGSGSCSSTRDHEVSATSYSTAGYAVAAAVEMQHLKHAADHFSFAPFRKSFEEVGISGDQVHSNQLGRSEQQHAGQEQQPHRPLLATTTAVPATAFLISRPTNPVSNIVPPAMQHASVVLDHDQFHVPAILLHHDKFQQQQQQKLDRRSAGLEELIMGCTSSSTKGEASIPHSQETEWPYQPYWTPDNQDHHG</aaseq> |
| Gene Sequence |
<dnaseqindica>1..81#198..389#542..719#1258..1847#2621..2875#3916..3999#5651..5734#ATGTACACCTCTCCCACACTCCTTGCTCTCTCGTTTGCTCTTCTACTGCTCATCCTCCTCCTCTACTACTCGTCCTCTTTGGTTTGCTTCCGGCCTCTTCTTCCTGCATAGCTTCTGTTATTCGATTTCGATGATCTTGTCTTCTCCTTGAATTGTGTGTGTATTAATTAACTGTATGTTTGTTTGATCCCTTGCAGCTCTATTCACAGCTAGCAACAAGAAGGAGGCTTACACATGCATGTGCACGGTCTCTGCCGGACGCATATGAATCAGGCATGAATAGGGGGCACATCAGCAGCTCGGAGCTCATCGACGCCAAGCTCGAGGAACGCCGGATCTCCACGGCCAAGCACTGCCCCAGCTGCGGCAACAAGCTCGACTGCAAACCGGTATGTGAAGAGTGAAGTGATCAACTTCGTTTTGCCTAGCTCTTTTCAGTAATTGCACACTTGCACCTCGATCGGTAGCGAGGGTTCTTGGGCTTCTTGCTGCCTGGTGCAAAACTTGTTCTTATGGAATTAATTGGTGTAACTGCAAGAAGGATTGGGTGGGGCTACCGGCAGGAGTCAAGTTCGATCCGACGGACCAGGAGTTGATCGAGCACCTCGAGGCCAAAGTGAGGGAAGAAGGCTCAAGATCTCATCCTCTCATCGATGAGTTCATACCCACGATAGAAGGGGAGGACGGCATATGCTACACCCACCCTGAGAAACTTCCAGGTGAGAGTGAGAGAGCTAAGGTAGCTATAGCTCAAAACATTGCACCCCCCGCATAGTTTTGATACAGATATATTCCTGGCTTTTTGCAAAACTTTATCGGGTTTTTTTTGCTTTCCATGGAGTGATATATATTGTATGCTGGGATTGTTTCGCCATGAATTATGGGTCGTGGTTTTGGATTTTGGGATATGGCATATATTCCCTTGTTGTTCTTGATGTGCTCTCCCCCCTCTCTATTCTTATTACTAGTGTTTCTCTACATGTGCTCTTGGCCGGTATATGCAAAGAGAATTATTGTTTATGGAAAGTTGTGCCTAGTCTCATCTCCCACTCTCTCCTCTCTGTCATGATGGTAAGATGCTTCTGAAGTTTCCAAATAGGTTTCTTTCCTCTCTTCCTCTTTTTCAGAGAGGTTTGTTGCATCTGTCAAGAAGCATAGGCCACCCACTCCACACTATACTCTTGGATCTCACAAAACTCTCTATACTACCTTGATCCTGCTAATTATTCTGTTTGTGCTGATCGATCGATGGAGCAGGTGTGACAAGGGACGGCCTGAGCAAGCACTTCTTCCACCGGCCGTCGAAGGCGTACACGACGGGGACGAGGAAGCGGCGGAAGATCCAGACGGAGTGCGACGTGCAGAAGGGGGAGACGAGGTGGCACAAGACCGGCAAGACCCGGCCGGTGATGGTGAGCGGCCGGCAGAAGGGGTGCAAGAAGATACTGGTCCTCTACACCAACTTCGGCAAGCACCGCAAGCCGGAGAAGACCAACTGGGTGATGCACCAGTACCACCTCGGCGACCTCGAGGAGGAGAAGGAAGGGGAGCTCGTCGTCTGCAAGATCTTCTACCAGACGCAGCCTCGGCAGTGCAGCTGGTCCTCCGACCGCGGCGGCGGCGCCGCCGCCACCGCATCCGCCGTGACGACGGCGGCGGTGCAACAGGATCAGCAGCGCAGGAGGGACAGCGGCAGCGGCAGCTGCTCGTCGACGAGGGACCACGAGGTGTCGGCGACGTCCTACTCGACGGCCGGGTACGCCGTCGCCGCCGCCGTCGAGATGCAGCATTTGAAGCATGCCGCCGACCATTTCAGCTTCGCGCCTTTCAGGAAGAGTTTCGAGGAGGTAATTAATTTAATTACCACTTGTTACATGCATACTGCCACTTTTCTGTATACATACTGTATGAATCTTTGATCAGTTTTCGGAGTAATGCTGGTTAGGTTACGCATCCTAATCAGTTTCTCTCCAAGTAAACTGCTGGTTAGGTTCTGTGCCGTTTTCTGCATGCATCTTAATCAGTGCACGTCATGCAGATCATGCAAATTAACCATGGTCCATATTCCCATGCACGCATGCATGGATATATATACACTCGCTCGCATGGATATATACTGACTTTCTGTTTTTCTAGGTGCAGATTGGGATACATATACTTTCTGTTTGATTAGATGAGCTTCCTTCAATTTGTTGCGTATGGATGAGCGGTTTGGGGCGGGGTAGCTGACCAAATGTGTAGGATGCGCCAATTTAAAGCAAAAGATGAGCTACACATCACACAGCAGCATGGACCCTTTTAATTAGTTCGAGCCTCACATCATTTTACTCAGATTGCAAGCAACCCTAAAACCATCCACGATCCACCCACCGTGAAAGCAAAAACTAGTAATATATATTTTCTGAATAATTGGCCCGGTCTCATTCTTTCAATTATTCCAACCAAAAAATGTATATTTCAAGAAAGTTCAAATAATATACATACTACTGTAACATACATACTAACTGAAAGGGAGTGATAAAAGACAAATATAATGGGAACATTATGCATGTATGTTAGTTTTATAAAAAACATTATGCATGCATGACATGGAATTTTTCCATTTGTTTGCATCAAACAGGTTGGTATAAGTGGTGATCAGGTACACTCCAATCAGCTTGGGAGGTCGGAGCAGCAGCATGCTGGCCAGGAACAACAGCCGCACCGGCCGTTGCTTGCAACCACGACGGCGGTGCCTGCCACGGCCTTCCTGATCAGCCGGCCGACGAACCCTGTATCAAATATAGTGCCACCAGCAATGCAGCATGCATCTGTCGTTCTTGATCATGATCAGTTCCACGTGCCAGCAATCCTTCTCCACCACGACAAATTTCAGGTGTGATTTCATCTCATCTTATACATTTTCTCCTCAAATAAAACATTTCCATTATCTAAAATAATTCCCTAAAATTAATACTAATTTCTCTTTTTCTAGCAGCTGGGTAATAGATTGGGCACGGTAGCTGTTGAAAAAAAAAACTATAGGAACACATATATGCATGCATTTATGAAGAATATTCTTTACATATTCAGAATGTTAAATTTAAGTAAGGAGTAACAAACCATCTCCAACAAAAAACAATTTCAGGTTGAAAACAAGCAATGGACTCGCTAGGCAGTACATTTCATACTTCCCATCTAGACAAACTTAATTAGTACGGCTTGGTCTAAAGTCCACATTTTCCTCCTTCAAGCTAAGAGTTTCTTGCTATCATAGGATCCCTTTGAATTCTCTAAAAATAAACTAAAAACCATTCTCAGCTTTCAATTTCAATAAAAAGAATCAAGGATTTGTGATAATCTTAAGTGTCAAAATTAGTCATTTTTAGTTGGTCATACTAAACATATTGGGCAATAATTTATACAAATAATTGTGATATACAAAATATTAAAAAAAATTCTAGTTATGGCACTTCTAATGTTGATTTGTACATATGTAGGGTTTTTCAAGTCGTGTAATTACTATTTGATATGAACTATGTTTTTTTATATATATACCAAGGAAGTTGCATATGGATGAAATTAAGCTGTCTGAAGATGCATTTTCTAGACTATAAATATAGAGCCTAGACAATTCTGGAAGGATTCTTTGTTTACCCATATATATATGTGTAATCTGGTAATGAATCTGCTTTGTATTTCCACCGTTCCTATATATATGTATCACTTTAGGTAAATCTATATACAATTGAACTGTTTATTTCATATATATCAAGATACTAATGCATTGTCTCAGCTCATTCTTCATCTCTTTGGTGATTTACTTAATTATATTATTGTAGCTCCTTTACTTTTTTTTTTCGTTTTGCTCTTTACTAAAGAATGCTTTAGCTACTGTTCTATCCCAACATAATTAACAACGAACATGCAACACAGCAGCAGCAGCAACAAAAGCTTGACAGGAGGTCTGCCGGCTTGGAGGAACTGATAATGGGCTGCACGTCTTCGAGCACAAAAGGAGTAAGTTTCTCTTGCATTTCTATTTGATTGCCTCCTCAGCATGGATCCAAGCCGATAATTTACCAGTCAGAGGCTCTACGCATGCAGTAAAGCATTCCTGCACATATCCAATTGGAATTAATATATATGCATGTACGTAGCAATTGCATGTGAGACGCATGCATGTGTCCCTTTTAAACGGTTTTAATCTGAACATTAGCTCAGGCCAAATTTAATATAATTGTAGTTATTTATATATACTGATTTAAACATATAATACATGGGTGGGAAAGCTGCAAGCTATGTCTTATAGGCGAGGTGAGGGGTTTAGAAAAGAAAGACTGCTCAGGAGGGTCCTGAGGAAACTTCAGTGTGGGGCCTCATAGTTTCTTTGTCGTCCTAGCCAGCACTTTGAAACAGGCCCTTCACCTTGACAGCTTTTTCCTCTCATTTGTTTCCCTATTTTTAAATTCGCCATTTTAGGTGTGCTTTTACAGCAAGCATGCCGACGAGAGAGAGAGAGAGAAATCTTCAGTACTCCTAGTGAGATAGTAGATAGAAGAAACATCATGAATATATGCAAACAAGGACCACCCTTTGCTTTGCTTTTGAGTGCCAAAGGGGGAGAGCCAAAGACCAGCGTAAAAACAAGACCATACTTTCCTTGCTTTCATGACCGTATAGGTGAAAACGAGAGCTTTCTCTCCATGTCAGTAGCCCCTCTCCTCGCTTTTCTGACTGTATGGCTATAAGAATAGTTGTTTACTGTTATCTCTTGCGAAAAGAGCAAAAGAAAAGGAGGAAATATCATTCGTTTCTTGCTCTCTTTTGTCTCTTTTCTATGAAATGAATTCACACTGACACCATGCATGAGGATAAGAGAATCATTATTGTGAAATTTGTTTGCATTAATCGTTGTGAACTTGTTCTTGTATTACATTACTAAAAATTAAAATCTTGACATTTACAAGGTAGTATATGCATGCACGTTCAGGTAATATAGAACAAAAGTGTACTTATTTTTGTCAAAACTCCATTGGATGATTAGACATTAGTACATCCGTCTCAAAATATAATAACTTTTAGCTACGAATTTAAACAAGAGTATGTCTAGATTCGTAGTCAATAATTGCTATATTTTCGAACAGATCAAGGTAGTAATGATATGTGTATTGCATAGTTATTCAATGAGATCGTTCTTTGACATGTTGGCCTCATTAATAATATGGTGCAATGCGTTATATTGGAGATCAATCATTCTGACCCCGACTATATACTCCGTATAAGTAAGTGACAAAAAGAGTTATGCCTTACTACTTTTCCCCTCCTTTGTTTTCGCGTTGAATTATATGGGAGATTAATTAATAAAGTACTGTGACAACACAACTATAGTACTACTAGTCTACTACCGTGGTATCTGCTATATCTCTCACCAGAGATCCGAATTGGCTACCTTGATATTATTTAAATGAACATTTCTGGTATCATCTGGAGTGTAAATAAGAGCAAGTACTATAAAACTTGCTCTAAGGTAGTCCGTACTTGAACAGTTGAAAATTTTGAATTATCTCCCTACTGACATTTTAAAGTGATACCGTATCTTTCTTATTCAACTGTTGCACTTCACTGAGCTGATCTTTTTTGACCCCCCCTTTTCCATATTCTATTGCAGGAAGCTTCAATTCCTCACTCCCAAGAGACAGAATGGCCTTACCAGCCATACTGGACTCCTGACAACCAGGATCATCATGGATAG</dnaseqindica> 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