BGIOSGA002441

From RiceWiki
Revision as of 18:17, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA002441

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002441, complete gene.

LocusTag

OsI_00289

Ensembl Transcript ID

BGIOSGA002441-TA

Ensembl Protein ID

BGIOSGA002441-PA

Length

5245

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2312419..2317663

Sequence Coding Region

2316991..2317663,2315791..2316408),complement(2314739..2315464,2313902..2313934),complement(2313528..2313782
,2312419..2313356

Genome Context

<gbrowseImage1> name=IndicaChromosome01:2312419..2317663 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:2312419..2317663 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCCGAGCTTCTTCTTCGCCTTGGTCGTCGTCTCGGCTTGGTGGACAGCGTTCATGCTCGCCGTGGCGGCGAGGGAAGCTGAGGAGAGAGGAAGCGGCTGCCCGGCCAAATGCGGCAACCTGAATATCTCCTCGCCGTTCTGGATCACCCAAAGACAGATGGATAGGCCGTGTGGTCCTCTGGATTTCCAGGTCGACTGCAACCAATCCACCGGTGTCGGGACTCTTCGGACCTCTTCAATTTTCGGGTTTCAGATCATCAACATATCTTACGGGGAACGTACTCTGCTCGCCTTAGACCGTCGCAAGCTGGATGACCTGACAAGCTTGAACCGCTGCCAAATCCCGAGCTGGAACACCTCCGCCAAGCTAGCCGTCCCGTTTAGGATCAGCTCTGCTGCCAATCTCGACCTCGTCTTCTACAACTGCACCAAGGCGCCGCCGGCGGAGCGGCATGAACAACTGGGGCTCGTGGAGACGAGATGCCGTAACAACTCGTTTGCTCGCCTAGGAGAGCGTTACGACGACCGGAGCAACTACGACGCCTACTACTTGGAAGGCTGCAGAGCCACGTTCTTGCCGGTGCTGGAGCCGCCTGGTGGCAAGGCGAACGCCAGCAGGTATGAGGAGCTCGTGCGTGGAGGCTTCCTCATAACATGGGACCTGCCAGCGAATACGGCGGCAGACAATCGTCCACAAGAAGGCTGCGCGGCCAGTACTGTATGTGGCAAGGTGACCATCTCGTCGCCGTTCGCCGTCGTGCCGGAGCAGGCAACGGAGAGCAAATGCGGCTGGCTTGGATTCCAGGTTATCTGCCGCAACGACACTCCATACCTCGGCTACTACAAGCTCGGTTATCGGATCCAGGTCCTCGACATCTTCTACGGCAACAATTCATTGCTCGTCTCTGACATCCACAAGCTCGGTGACTTCGATGTCTTCTCCGGCGTCAGCAAAGAATACCCCTGCCATGTTCCGACGAGCAACACCTCCTCCAAGGTCGCCCTCCCGTTCTCCATCAGCACCACCAATCTCAACCTCTTCCTGTACAATTGCAATAAGACGCTTGTGCCGCGGGACGGAGACGACGACCTCGTGGAGACGAGGTGCGGCAACAAGACGTTTGCTCGCGTAGGAGGGAATTACAGTGTTTCGGGCGATTACGCGGCGTTTTACATGGAAGGCTGCAACGCTACCGTCGTGCCGGTGATGGGCACGGACGCGGGGAGCTATGAGCAGCTCATCCGCGACGGCTTCCTCTTGACATGGCAAGGGCCGCCGTCATCTGCTTGCTTCCTCAAGTTGCCGGCACCGGCGAGCTCGTCGAACTCGTCTAGTCCTGGCTGCTTGCCCACGCCATGCGGCAACCTGACCATCTCCTACCCGTTCTGGCTGGAGGAGCCCGGCCGGCCGCCGTGCGGGTCGCCGCCGTTCCAGCTCAAGTGCAACGCCAGCGGCGCCTACCTCACGCACACCATCTACGAGGCGTATCGCGTTGTTGATATCTTCACCGGAAACAACACCGTCCATGTGGTGGACGAGAATCTCCCGCTCGCCACCGGCTGCCCGGCGCCGCCGTTCAACATCTCCGATGGCATCTGGCAGGCGCCGTTCGTCATCAGCGAAGCCAACGCAGAGCTGCGCTTCCTCTCGTGTAACAAGTCACTTCCGGCGGCGGCTGCTCCTCCCGGCTTCCACAGACTGCCTTGTGATGACCAAAACTCCTCCGTCCGGCTCGTCAGCGACCACCATTTACACGAGGATGGGATTCCACCGGGCTGTAACTTCACAGTTGTGCCGATCGTTCAGCGTCACAATGGGAGTATGGCCGGCTATATTGCCAGCATGAGGAGTGGGTTTCTACTAGAGTGGGCGGTGGTTTCAGGGGATTGTCCCAAATGTCAAGTAAGCGGCGGAAATTGCACGTACAGCGACGACCTGGAGTTCGCCTGCAATTGCCCCGACGGGATGCACCCTGACAAGTGTAGAGAGTTCAGAAAATCGGAAGAGCACGGTTCAAGAAGCAAGAGTCGCATAATAAGAATAGCATGTGGATCAGGCGGCGGAATATTATTGATTGTATCTATATTCATTTTTGCTTGGCACAAACGCAAGAAGAGGAAACAAACCCGAGATTTGAAAGATCTCATGCATAGTTCATCTTCAATGCAATCATACAGCAAAGACCTTGAGTTGGGTGGTTCTCCCCATATCTTCACTTACGAGGAACTTGAAGAGGCTACTGCTGGATTTAGTGCCTCCAGGGAACTTGGTGATGGTGGTTTTGGAACTGTTTACAAAGGAAAGCTCCGGGATGGGAGAGTAGTTGCAGTGAAGCGCCTTTACAAGAACAACTACAGACGAGTAGAGCAATTCCTAAATGAGGTAGACATCTTGTCCCGCCTACTGCACCAGAACCTTGTTATCCTATATGGCTGCACGTCTCGTTCTAGCCGTGACCTTCTCTTGGTCTATGAGTACATCCCAAATGGGACAGTTGCAGACCATCTACATGGACCTCGTGCAGGAGAACGAGGCCTCACATGGCCTGTAAGAATGACAATTGCGATAGAAACGGCTGAGGCACTGGCATACCTTCATGCAGTTGAAATCATACACCGTGATGTCAAGACCAACAACATATTGCTGGACAACAACTTCCATGTCAAAGTTGCGGACTTTGGACTATCGCGCCTGTTCCCGCTTGAAGTCACCCATGTATCAACTGTTCCACAGGGCACACCAGGGTATGTTGACCCAGTGTACCACCAGTGCTACAAGCTAACCGATAAGAGTGATGTGTATAGCTTTGGTGTTGTGTTGATAGAGCTAATTTCCTCAAAACCAGCTGTGGACATGTCCAGGAGCCACAGTGACATTAACTTGGCTAACATGGCTCTCAACAGAATTCAGAACCATGAAGTTGATCAGTTGGTTGATCCAGAGATCGGCTATGAGACTGACAGTGAAACAAAGAGGATGGTAGATCTGGTGGCCGAGCTGGCCTTTCAGTGCTTGCAGATGGACAGAGATAGCAGGCCACCAATTAAGGAGGTAGTGGAGGTCCTGAATTGTATCAAGAACGGGGAATGTCCAGCGGAAAAGATGAACAAGAATGCGTCTCCAAAGGAAGATTCACATCTGCTGAAGGACAACCTACAGTATTCGCCTGACTCAGTAATCCATAGATTTCATAGCCAATCTACTAACCACTCGGTAGCATCAAACTCTAGCGGATGA</cdnaseq>

Protein Sequence

<aaseq>MAPSFFFALVVVSAWWTAFMLAVAAREAEERGSGCPAKCGNLNISSPFWITQRQMDRPCGPLDFQVDCNQSTGVGTLRTSSIFGFQIINISYGERTLLALDRRKLDDLTSLNRCQIPSWNTSAKLAVPFRISSAANLDLVFYNCTKAPPAERHEQLGLVETRCRNNSFARLGERYDDRSNYDAYYLEGCRATFLPVLEPPGGKANASRYEELVRGGFLITWDLPANTAADNRPQEGCAASTVCGKVTISSPFAVVPEQATESKCGWLGFQVICRNDTPYLGYYKLGYRIQVLDIFYGNNSLLVSDIHKLGDFDVFSGVSKEYPCHVPTSNTSSKVALPFSISTTNLNLFLYNCNKTLVPRDGDDDLVETRCGNKTFARVGGNYSVSGDYAAFYMEGCNATVVPVMGTDAGSYEQLIRDGFLLTWQGPPSSACFLKLPAPASSSNSSSPGCLPTPCGNLTISYPFWLEEPGRPPCGSPPFQLKCNASGAYLTHTIYEAYRVVDIFTGNNTVHVVDENLPLATGCPAPPFNISDGIWQAPFVISEANAELRFLSCNKSLPAAAAPPGFHRLPCDDQNSSVRLVSDHHLHEDGIPPGCNFTVVPIVQRHNGSMAGYIASMRSGFLLEWAVVSGDCPKCQVSGGNCTYSDDLEFACNCPDGMHPDKCREFRKSEEHGSRSKSRIIRIACGSGGGILLIVSIFIFAWHKRKKRKQTRDLKDLMHSSSSMQSYSKDLELGGSPHIFTYEELEEATAGFSASRELGDGGFGTVYKGKLRDGRVVAVKRLYKNNYRRVEQFLNEVDILSRLLHQNLVILYGCTSRSSRDLLLVYEYIPNGTVADHLHGPRAGERGLTWPVRMTIAIETAEALAYLHAVEIIHRDVKTNNILLDNNFHVKVADFGLSRLFPLEVTHVSTVPQGTPGYVDPVYHQCYKLTDKSDVYSFGVVLIELISSKPAVDMSRSHSDINLANMALNRIQNHEVDQLVDPEIGYETDSETKRMVDLVAELAFQCLQMDRDSRPPIKEVVEVLNCIKNGECPAEKMNKNASPKEDSHLLKDNLQYSPDSVIHRFHSQSTNHSVASNSSG</aaseq>

Gene Sequence

<dnaseqindica>1..673#1256..1873#2200..2925#3730..3762#3882..4136#4308..5245#ATGGCCCCGAGCTTCTTCTTCGCCTTGGTCGTCGTCTCGGCTTGGTGGACAGCGTTCATGCTCGCCGTGGCGGCGAGGGAAGCTGAGGAGAGAGGAAGCGGCTGCCCGGCCAAATGCGGCAACCTGAATATCTCCTCGCCGTTCTGGATCACCCAAAGACAGATGGATAGGCCGTGTGGTCCTCTGGATTTCCAGGTCGACTGCAACCAATCCACCGGTGTCGGGACTCTTCGGACCTCTTCAATTTTCGGGTTTCAGATCATCAACATATCTTACGGGGAACGTACTCTGCTCGCCTTAGACCGTCGCAAGCTGGATGACCTGACAAGCTTGAACCGCTGCCAAATCCCGAGCTGGAACACCTCCGCCAAGCTAGCCGTCCCGTTTAGGATCAGCTCTGCTGCCAATCTCGACCTCGTCTTCTACAACTGCACCAAGGCGCCGCCGGCGGAGCGGCATGAACAACTGGGGCTCGTGGAGACGAGATGCCGTAACAACTCGTTTGCTCGCCTAGGAGAGCGTTACGACGACCGGAGCAACTACGACGCCTACTACTTGGAAGGCTGCAGAGCCACGTTCTTGCCGGTGCTGGAGCCGCCTGGTGGCAAGGCGAACGCCAGCAGGTATGAGGAGCTCGTGCGTGGAGGCTTCCTCATAACATGGGACCTGCCAGGTAAGTTCACCCTCCTGAAACTATTCTGTTAGGATCAAGTTCGTATGGAAAATCCACTGTATATCCTGATACTTCCGATCTCCAAGCGAGTACTAGTAGAATACAGTTCTCGCTCATCAGCGTGTAGGACAGGGAATCTATCGGTTGGCTGATAAGGTCGTCATCTTGCCCAATCGTGGCGGCTGGGCAACAGGGATGAGCAAGAATTAAACTAAAATTAAAGTGATCAAAGCAGTGGACCATGACCGTCCTTTCGCATTCCATCTCACTCCGGTGCCATTCCTTCCAATCTTCGATCCTGTTCTGGTACATGACTGAGAAGACCATGCACATCTGTTGGAATTGGAACCGATACGGCAAGACGATGAGGCCGTAGACAGCATCCAGTCAATTTTTTCGGCCACTACAGAGAATTCCCAAAGTTAAATGTGTCGTACTAGAAGAAGAAGTAGCAGTATTAATTCTCTCATGTCTTCCTCAATCCTCATCAACAACACATCACCAATTCATCCTCTTTGTTTTCGATGCCCTCTCCTTCCTTGTTCCTCTTGTTCGCCTGCCTCGCCTGGGCGAGTCAAGCAGCGAATACGGCGGCAGACAATCGTCCACAAGAAGGCTGCGCGGCCAGTACTGTATGTGGCAAGGTGACCATCTCGTCGCCGTTCGCCGTCGTGCCGGAGCAGGCAACGGAGAGCAAATGCGGCTGGCTTGGATTCCAGGTTATCTGCCGCAACGACACTCCATACCTCGGCTACTACAAGCTCGGTTATCGGATCCAGGTCCTCGACATCTTCTACGGCAACAATTCATTGCTCGTCTCTGACATCCACAAGCTCGGTGACTTCGATGTCTTCTCCGGCGTCAGCAAAGAATACCCCTGCCATGTTCCGACGAGCAACACCTCCTCCAAGGTCGCCCTCCCGTTCTCCATCAGCACCACCAATCTCAACCTCTTCCTGTACAATTGCAATAAGACGCTTGTGCCGCGGGACGGAGACGACGACCTCGTGGAGACGAGGTGCGGCAACAAGACGTTTGCTCGCGTAGGAGGGAATTACAGTGTTTCGGGCGATTACGCGGCGTTTTACATGGAAGGCTGCAACGCTACCGTCGTGCCGGTGATGGGCACGGACGCGGGGAGCTATGAGCAGCTCATCCGCGACGGCTTCCTCTTGACATGGCAAGGGCCGCCGTCATCTGGTAAGTTCGTTCGCGAAATTATCCATTTAATCATCACTTTCCGGAGGAGGAAATGCGTAAAATTTATGGTGTCAACTTTATCGAATCCGTTAATCAATCAGTGACTTGTTTATTGGTTGATAAGGCAGTCGTCATCGCTAATCCATCGACTTTGACCGGTCAAAACCGCTTCGCCACCGTCCTTTTGCCCCACGCCTCATATCCCATCCCTCTATCTCTCGTCCCCTTCTTCTCTCATATAATCCATTTCACCACTGCATTCCGTAGTTGATATGCGTGCCCAAGTACACCAGATATGCCTCCGCTCATACTGCTACTGCTGGTAGCTTGCTTCCTCAAGTTGCCGGCACCGGCGAGCTCGTCGAACTCGTCTAGTCCTGGCTGCTTGCCCACGCCATGCGGCAACCTGACCATCTCCTACCCGTTCTGGCTGGAGGAGCCCGGCCGGCCGCCGTGCGGGTCGCCGCCGTTCCAGCTCAAGTGCAACGCCAGCGGCGCCTACCTCACGCACACCATCTACGAGGCGTATCGCGTTGTTGATATCTTCACCGGAAACAACACCGTCCATGTGGTGGACGAGAATCTCCCGCTCGCCACCGGCTGCCCGGCGCCGCCGTTCAACATCTCCGATGGCATCTGGCAGGCGCCGTTCGTCATCAGCGAAGCCAACGCAGAGCTGCGCTTCCTCTCGTGTAACAAGTCACTTCCGGCGGCGGCTGCTCCTCCCGGCTTCCACAGACTGCCTTGTGATGACCAAAACTCCTCCGTCCGGCTCGTCAGCGACCACCATTTACACGAGGATGGGATTCCACCGGGCTGTAACTTCACAGTTGTGCCGATCGTTCAGCGTCACAATGGGAGTATGGCCGGCTATATTGCCAGCATGAGGAGTGGGTTTCTACTAGAGTGGGCGGTGGTTTCAGGGGATTGTCCCAAATGTCAAGTAAGCGGCGGAAATTGCACGTACAGCGACGACCTGGAGTTCGCCTGCAATTGCCCCGACGGGATGCACCCTGACAAGTGTAGAGAGTTCAGAAAATCGGAAGAGCACGGTAAATTTGTCCAGTCAATTATCAATTAGAATAAAAATTTTAACATAGTTCTGTGAACATGCAGCCTAGGCCATCCTAACCGATTCAATGCATCCAAAGTGTGTTCATCTAGTTGATAGTTTTCTTTATATATATAGAAAAGAATGACACATCATTTCGTTATACAGGAAGATTTCCATGCTACTGTGGCCTAATGTCCACTAGATAAACTCTTATTATAATAATGTGCGTGACATCTAGTTTTGCTATCGAGGAAAGAAATTAAACACGGCATTGTCACAGCAATGTTCATAAGAATATAAAATGCAAAGTGGATATTGATATTTTTGTTTTGAATTATGAGTGTTTGCTTCAAGTTCCTGCTGTTTTGGTTGTTAGTTCCTCATCAAACAATTATTTCACTGATGGGAACATTGGCATCTGGCAGCTTATGGAATCCTAGTCAAACGTGTTACGTGTAGTTTGAAGTATTCAACTACACTATCTGATAAAGATATCATACCAATATCAATGTTCCTATATTTTCTTCTGCTGATTGCTGACTGACGAAGAAATCCCTCAACCGATTGACAGCAAATACCCTTTAATTTTCTAATCCTTAATTAGTGTGTTCCAAACATGTGGAAAGCATAAATTGCATCTGTATTTCTGTTGAATTAGGCTGAAAAGTTGTATAAGCACTGTCCTTCGTTTCAACAGGGGGTTAGGGGAGCAATGATACCCTAACAATGTGATTATGAATGATCATTCTATTTGTTCATGGCATATTTGTGCAAGGTATTAAAAGTCTGTGTTCTTCTGCAGGTTCAAGAAGCAAGAGTCGCATAATAAGAATAGGTGAGTATAATTCATTCTTGTTTCTTGGACTTCCCCAACCATTCAAAATGTAATTATGAAGATATGCTTCAGATCCTTGGTTCTCACATATTGATAGTGCTCTGTCTCTGTTATTGCAGCATGTGGATCAGGCGGCGGAATATTATTGATTGTATCTATATTCATTTTTGCTTGGCACAAACGCAAGAAGAGGAAACAAACCCGAGATTTGAAAGATCTCATGCATAGTTCATCTTCAATGCAATCATACAGCAAAGACCTTGAGTTGGGTGGTTCTCCCCATATCTTCACTTACGAGGAACTTGAAGAGGCTACTGCTGGATTTAGTGCCTCCAGGGAACTTGGTGATGGTGGTTTTGGAACTGTTTACAAAGGTAGGAGAATATGTTTGCACAACTCCCTTGTTGTTAATAGATTTCTCATCTAATCACTTCCTCATTAGCATGCCTAATTGCATGTGACAGGGGCTCCGTTGAACTTTGTTCCATAATAGATAACTTCCCCTATTAACTTAGCAATTACAATTCTTCCTTTCTGCCATTCAGGAAAGCTCCGGGATGGGAGAGTAGTTGCAGTGAAGCGCCTTTACAAGAACAACTACAGACGAGTAGAGCAATTCCTAAATGAGGTAGACATCTTGTCCCGCCTACTGCACCAGAACCTTGTTATCCTATATGGCTGCACGTCTCGTTCTAGCCGTGACCTTCTCTTGGTCTATGAGTACATCCCAAATGGGACAGTTGCAGACCATCTACATGGACCTCGTGCAGGAGAACGAGGCCTCACATGGCCTGTAAGAATGACAATTGCGATAGAAACGGCTGAGGCACTGGCATACCTTCATGCAGTTGAAATCATACACCGTGATGTCAAGACCAACAACATATTGCTGGACAACAACTTCCATGTCAAAGTTGCGGACTTTGGACTATCGCGCCTGTTCCCGCTTGAAGTCACCCATGTATCAACTGTTCCACAGGGCACACCAGGGTATGTTGACCCAGTGTACCACCAGTGCTACAAGCTAACCGATAAGAGTGATGTGTATAGCTTTGGTGTTGTGTTGATAGAGCTAATTTCCTCAAAACCAGCTGTGGACATGTCCAGGAGCCACAGTGACATTAACTTGGCTAACATGGCTCTCAACAGAATTCAGAACCATGAAGTTGATCAGTTGGTTGATCCAGAGATCGGCTATGAGACTGACAGTGAAACAAAGAGGATGGTAGATCTGGTGGCCGAGCTGGCCTTTCAGTGCTTGCAGATGGACAGAGATAGCAGGCCACCAATTAAGGAGGTAGTGGAGGTCCTGAATTGTATCAAGAACGGGGAATGTCCAGCGGAAAAGATGAACAAGAATGCGTCTCCAAAGGAAGATTCACATCTGCTGAAGGACAACCTACAGTATTCGCCTGACTCAGTAATCCATAGATTTCATAGCCAATCTACTAACCACTCGGTAGCATCAAACTCTAGCGGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002441