Os08g0532500

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Revision as of 13:09, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0532500| Description = Conserved hypothetical protein| Version = NM_001068875.1 GI:115477488 GeneID:4346139| Length = 2557 bp| Definition ...")
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Gene Name

Os08g0532500

Description

Conserved hypothetical protein

Version

NM_001068875.1 GI:115477488 GeneID:4346139

Length

2557 bp

Definition

Oryza sativa Japonica Group Os08g0532500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26631230..26633786

Sequence Coding Region

26631232..26631820,26632299..26633050

Expression

GEO Profiles:Os08g0532500

Genome Context

<gbrowseImage1> name=NC_008401:26631230..26633786 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:26631230..26633786 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atcccccaccatccaatttcgttttcgttttcgtttcttccgccgcaagcctcgccgcccgccctcgcaccggcggccgccgccgccgcggcgcgcgatggagtcgacgtgctggtcgtgcggcgagggcgcggtggtggcggacccggacaccggtgtgctcgtctgcacctcctgcggccgcatccacgactccggctcgtcggagttcgtccaccagtcgatctgcaccgacaacggcgtgtacgacctccgcgcctcctccttcgtctaccaccagtcgcagtcgcagtaccgggaccagaagctctcgaacggcgtcgtcaccatcgcctccatcgccgcccgcctcggcctctcccccaccgccgccgacgaggcgctcgccatggccaagtccgccacgggcggcaacctcgccacccagggctccgccttcctcccggccctcgcctccgcctgcgccttcctcgtcgcgaggtcccaccgcctcccgctctccctggccgaggccgccgagaccgccttctgctcggtggcctcgctcgccgacctcgtctcccgcatcgcctcccacctctcgctccccccgttgatgatgatgaatccaagtaccttcaggttgctccccaattggcttctgatgatttggattccaataattccgggcaggaggggaaggaattggagaattttaagatctcggaggagtgcctatcaagtgcttaccaaaatgtcttgaagaggcttgctcaactacaaagacttgggcaagttggtaaaggtgctaacaggaagaggcagcggataggagggctggagctggagccatgtatagattcgctggatgatggttggaccaaggacatggtgttggaggatgtagtgaatattgacgtcggctttgatgttcctccgccatcgtttgctgctggaatgaagttgcagaagaaaaggagagcacggattgaagctgctaagtgccgaattgatgcgattagaaaaggtcctgttgagagcgagaataaattgcaggctgctctgagaaatgaagatgcctgctcaccgcaaaaaccggccaggaagaagcgaggcaaaaagaggatagctggaagtgatcgtgccatgaatggagagcttccaatagagatgccggatggtccaggtggtgagaagaagagacggaaaggagctccctctgatggtattgactgggaggactgtatcattgagctcctgttattacacggcgcaaatgaggaagagatcgaacaaggacaatacagaagattgttagatctacatgtcttctgtgcagtgagtgccagtggacacaaatga</cdnaseq>

Protein Sequence

<aaseq>IPHHPISFSFSFLPPQASPPALAPAAAAAAARDGVDVLVVRRGR GGGGPGHRCARLHLLRPHPRLRLVGVRPPVDLHRQRRVRPPRLLLRLPPVAVAVPGPE ALERRRHHRLHRRPPRPLPHRRRRGARHGQVRHGRQPRHPGLRLPPGPRLRLRLPRRE VPPPPALPGRGRRDRLLLGGLARRPRLPHRLPPLAPPVDDDESKYLQVAPQLASDDLD SNNSGQEGKELENFKISEECLSSAYQNVLKRLAQLQRLGQVGKGANRKRQRIGGLELE PCIDSLDDGWTKDMVLEDVVNIDVGFDVPPPSFAAGMKLQKKRRARIEAAKCRIDAIR KGPVESENKLQAALRNEDACSPQKPARKKRGKKRIAGSDRAMNGELPIEMPDGPGGEK KRRKGAPSDGIDWEDCIIELLLLHGANEEEIEQGQYRRLLDLHVFCAVSASGHK</aaseq>

Gene Sequence

<dnaseqindica>3..591#1070..1821#gaatcccccaccatccaatttcgttttcgttttcgtttcttccgccgcaagcctcgccgcccgccctcgcaccggcggccgccgccgccgcggcgcgcgatggagtcgacgtgctggtcgtgcggcgagggcgcggtggtggcggacccggacaccggtgtgctcgtctgcacctcctgcggccgcatccacgactccggctcgtcggagttcgtccaccagtcgatctgcaccgacaacggcgtgtacgacctccgcgcctcctccttcgtctaccaccagtcgcagtcgcagtaccgggaccagaagctctcgaacggcgtcgtcaccatcgcctccatcgccgcccgcctcggcctctcccccaccgccgccgacgaggcgctcgccatggccaagtccgccacgggcggcaacctcgccacccagggctccgccttcctcccggccctcgcctccgcctgcgccttcctcgtcgcgaggtcccaccgcctcccgctctccctggccgaggccgccgagaccgccttctgctcggtggcctcgctcgccgacctcgtctcccgcatcgcctcccacctctcgctccccccgctcccgtccttcgactacgccgccgcgctcgagcgcgccgtgcgctcctcgccctcgctgtcctccgccgcgagcgagaggacggaggtgatcctctcccaatcccggttcctcctccgctgcgcctccaagtggtcgctcaccacggggcggttccctctccccctcatcgccgccctcgtcgcgttcgccgcggaggcgaacggggtcacctccatcaccgtggaggacattgcgcgggacatctctgcgaggctgcacaccagcctccgccggtacaaggagctcgtcgatgcgctggtgcgcgtcgcgcgggagctgctgccgtggggcgccgatgtcaatgcgaagaacttgctcctgaacgcacccgtgctgctccggctcatggagatgaggtcacagtccgacccatcagagcagtttctcgagagcttcgctccggacattgccgggattgtgcaggcgtgctcagccgttgatgatgatgaatccaagtaccttcaggttgctccccaattggcttctgatgatttggattccaataattccgggcaggaggggaaggaattggagaattttaagatctcggaggagtgcctatcaagtgcttaccaaaatgtcttgaagaggcttgctcaactacaaagacttgggcaagttggtaaaggtgctaacaggaagaggcagcggataggagggctggagctggagccatgtatagattcgctggatgatggttggaccaaggacatggtgttggaggatgtagtgaatattgacgtcggctttgatgttcctccgccatcgtttgctgctggaatgaagttgcagaagaaaaggagagcacggattgaagctgctaagtgccgaattgatgcgattagaaaaggtcctgttgagagcgagaataaattgcaggctgctctgagaaatgaagatgcctgctcaccgcaaaaaccggccaggaagaagcgaggcaaaaagaggatagctggaagtgatcgtgccatgaatggagagcttccaatagagatgccggatggtccaggtggtgagaagaagagacggaaaggagctccctctgatggtattgactgggaggactgtatcattgagctcctgttattacacggcgcaaatgaggaagagatcgaacaaggacaatacagaagattgttagatctacatgtcttctgtgcagtgagtgccagtggacacaaatgaaaacatggtgatgtaagtccataggtctttaggataattaagacagatttattgctgaacataggttctcactactataaaccacaacaatctgttgatagaatttttttttcttgatagagaaattttgtgctgagtaccactttggtgaagttcaattaagctgattgtggaaagaaaatattgtgatagagatgaaaatacatgtttgggttttgttttccctggtaaaacagacagtagaatgcaacctaggaatgattgggagactagaattttttgtcttaaatgactgggatgttctggttactgtacattgatgtactgcttatgagtgacttgtagttataaattttcactctactgtcatcagtttctcatagatggagtcagaaaatgaaaaatgtgcattggcgtatcgtgctttcctgatgaagtgtgtttctgattatttcgaagtggttcagatcttcaggatgcaatctttcttttttaaggtaatgggtggctactgactacatatatgtgactcaaattactattggtgatatatctatcctattcctatgggcgaaaataacatttggtttgtaatcgtgcaaaatgtggataagtatttacatgtttatttgtaatctatgttgttcagcggttcttgttgctaaaggccgcaaggacagactaccgatttaagttaccaggtcatgtgcaattttttttaagatgtactcaactg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0532500, RefSeq:Os08g0532500