Os08g0532900

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Revision as of 13:09, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0532900| Description = contains InterPro domain(s): IPR000348, IPR009038, IPR010978| Version = NM_001068879.1 GI:115477496 GeneID:4346143| ...")
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Gene Name

Os08g0532900

Description

contains InterPro domain(s): IPR000348, IPR009038, IPR010978

Version

NM_001068879.1 GI:115477496 GeneID:4346143

Length

3154 bp

Definition

Oryza sativa Japonica Group Os08g0532900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26647004..26650157

Sequence Coding Region

26647167..26647300,26648210..26648317,26648401..26648587,26649354..26649563

Expression

GEO Profiles:Os08g0532900

Genome Context

<gbrowseImage1> name=NC_008401:26647004..26650157 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:26647004..26650157 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtcctgagttggagaacggtgtgcctcttggttctctgcaccgtggcgttgctgcgcccggctgcggctatccgctttgtgattgacagggaagagtgtttctcgcataacgtggagtatgagggggatactgttcatgtatcgttcgtggtgatcaaggctgacaccccatggcattatagcgaggacggagtggatcttgtggttaaggatcctaatggtgctcaagtccgtgattctcgtgacaagactagtgataagtttgagttcatagttcagaagagaggcgtacatcgcttctgcttcaccaataaatccccataccatgaaactgtagattttgatgtgcatgttggccatttttcgtactttgatcagcatgcgaaagatgaacattttgctcctttgtttgaacaaatagcaaaattagatgaagcgctttacaacattcagttcgagcagcactggctagaggcccaaactgaccgacaagctatattgaacgaaaacatgagcaggagggctgtccacaaggctctattggagtcagcagcgctgattgcagctagcgtcattcaagtctatctattgcgccgcctctttgagcgcaagttggggacatccagggtctaa</cdnaseq>

Protein Sequence

<aaseq>MEVLSWRTVCLLVLCTVALLRPAAAIRFVIDREECFSHNVEYEG DTVHVSFVVIKADTPWHYSEDGVDLVVKDPNGAQVRDSRDKTSDKFEFIVQKRGVHRF CFTNKSPYHETVDFDVHVGHFSYFDQHAKDEHFAPLFEQIAKLDEALYNIQFEQHWLE AQTDRQAILNENMSRRAVHKALLESAALIAASVIQVYLLRRLFERKLGTSRV</aaseq>

Gene Sequence

<dnaseqindica>2858..2991#1841..1948#1571..1757#595..804#gtcgtcgtcgtcgtcgtctcctcgatcgggttaccacggctgcgggctacggcgactagcttccttctctcgccgaagcgagacctcgcctcccccgaggtattcctctctcctcctcctccgcctcctccgcggtgctaagccggcgtagacaggagatccatccggatttggatgggatgggatcggtttggtttcctttttttttttcaccccctcggcggcgttgaaatcgtagcttgatttgacacctgtttctacgattaatcggacaaatttccgatgattcgtttggttacttatggaatagtagttaattgcacttgatttccactagattcggggttcagctgaacccccatgaggccatgacccgctgtagatccccttatggttgatgtttgcgcaataggaaaaaaatagaggatccaattttggatttccttgatgcccaaaaccccggggcacgtcctcactgtggcgtatgattgtgtgttagattgatacggaagagatctagtgaatgatactttggaatttgtctctgcaggaacctgtgtgcaataatttgttgttacctctggcatccataagatggaggtcctgagttggagaacggtgtgcctcttggttctctgcaccgtggcgttgctgcgcccggctgcggctatccgctttgtgattgacagggaagagtgtttctcgcataacgtggagtatgagggggatactgttcatgtatcgttcgtggtgatcaaggctgacaccccatggcattatagcgaggacggagtggatcttgtggtaagtgctttaactcattttgcatctctgtgtatacccttcatgaataggtattggacttgttgatctgtcctgttcaatgcgacagttagttcaaacttgaaagcatgtttgttttgaacctgtaaaataaaatcttgataggatcataggactagtaaaaagttctcctaacaaactagattagagcacattgcctccttaaacgtgcatcttaaatcttgaactgttatcttgacaacttttcatatgcaaaacaggttattaggctgtctgaactttctttaaattaaacttcattattactgttgagctccattttttttttcaaataccactgctgtagtgctgtacaatacaactgttagtaaaatatttggctgctgataggttgacagctttaacttgttttgttgattgcactgagacttcctttcaggaactttagtttcagtttctaaagtttgccttctttttctatgatcatggttttattggaatagatggacatggtctgaatacaccagataactggctcctgtttgggtttgataggctcaggttaatcagtttgtatgcttttagtcttcctactggagtgcatatacaataaacctctgtttgtcaaacgatgcatttgcatcagacgttctagcactcagttggcctgtgaaataaagcatgttagcaatctatttttgttgcacatcgtacttatgaactaatgatgttatgtataacatgcctccattctgacgaatcacaggttaaggatcctaatggtgctcaagtccgtgattctcgtgacaagactagtgataagtttgagttcatagttcagaagagaggcgtacatcgcttctgcttcaccaataaatccccataccatgaaactgtagattttgatgtgcatgttggccatttttcgtactttgatcagcatgcgaaagatggtaaggatttctgaagtttctatactttggctaaactataagttactgccatctccaacttatcttttctgtaatggatgcagaacattttgctcctttgtttgaacaaatagcaaaattagatgaagcgctttacaacattcagttcgagcagcactggctagaggcccaaactgaccgacaagctatatgtaagttttctctgttaccatgccatgtataatactatttaaaatgttttactattgttcctgttgtttttactatcataacttgattctcatcattacctatgccgtttattctggttatttagctaaaaccactatcagttaccacctgtaccttgtcgctagctctataagttattatgtagatatttatatgttcctctgttgacctaaaaaagatgcaatgtttgttgtcccttcaccgagtgacaataacatttattggcctccatacttcatgaagtctgagaaccagaaccagcaatcattttttcttggagtgctttacctttggccgttacttatccttctacaggaggcatctacaatgttgtgagctcagtattgctaaccaacaagccatgcctttttgctatctcttcttggccttttccagctgcttatatctgtcaagttagatatcatctaatattgttcctattgtttaactttattctcatccatagatatgccatacattctgttttgtttagctaaaaccactagctattaccaactatagcttgtcactagctctataagttgtaacgtagatgtctatatgttcatttaatgacctataaaaggatgcaatgtttcttgccccttcactgagtgacataatacccgttattgcaaccatacttcgttaagaagtctgagaaccagcaatcatattttttttcttcgagtgcttgcctttggccgttacttgctatatcatttttgataggaagtatctacaatgtgtcagctcagattgctacccaagaaaccatgccttttttaactattttttctttgccttccagctgcttatatctgtcaagttagatatcatctaacctcgtctttcctggtatcatgcagtgaacgaaaacatgagcaggagggctgtccacaaggctctattggagtcagcagcgctgattgcagctagcgtcattcaagtctatctattgcgccgcctctttgagcgcaagttggggacatccagggtctaaatactccaaaagtagcagctcctcctaatttacactctcgtcatcccaactaaagctgtaattccgaactgtattggttgctagatctgctgtttacatgctgtgggttgctgtcacatagacctttaattattatgattccattagatgttttccttgaaac</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0532900, RefSeq:Os08g0532900