Os08g0533600

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Revision as of 13:09, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0533600| Description = Similar to ACR4| Version = NM_001068881.1 GI:115477500 GeneID:4346145| Length = 4355 bp| Definition = Oryza sativa ...")
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Gene Name

Os08g0533600

Description

Similar to ACR4

Version

NM_001068881.1 GI:115477500 GeneID:4346145

Length

4355 bp

Definition

Oryza sativa Japonica Group Os08g0533600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26689170..26693524

Sequence Coding Region

26689551..26689633,26691174..26691219,26691355..26691469,26691892..26691959,26692061..26692687
,26692774..26692878,26692962..26693309

Expression

GEO Profiles:Os08g0533600

Genome Context

<gbrowseImage1> name=NC_008401:26689170..26693524 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:26689170..26693524 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaggagtggtggggagttggtggtggtggaggaagacgatgagtacgccaagctggtcaggaggatgaacccacccagtgttgtgatagacaatgactcgtgcgacagtgcaactgtcatccgggttgatagggtcaagaagcatggcattttactggaggctgttcaagtacttgtggacctcaacctcgtcatcaccaaggcttacatttcttcagacggcaactggttcatggacgtgttcaatgtgaccgatcaggacggcaacaaggtgcagaacaaggaggtcactgactgcattaagaaatgcttggagtcggaggattacctcgtgctgccggcgagctcgccggccggcggcgctgcgccgtcggaggagaccacctgcatcgagctcaccggcaccgaccggccggggctcctctccgaggtgtgcgccgtgctggcttcgctgaggtgcaacatcgtgaacgccgaggtgtggacgcacgaccgccgcgccgccgccgtcatccagatcaccgacgaggccaccggcctccccgtccgcgacggcgggcggctgtcccagctgcaggagctcctcggcaacgtcatgcagggagacggcgacggcggcggtgacagcaggaagggcagcacggccgtgtcgctgggcgccgcgaacgccgagcggcgcctgcacaggctcatgctcgacgacggcgacgccggccgatgcggcgaggagcggggcggcgtggcggcggcgaaggcgaaggcgaaggtggtggtgatggactgcacggagcggcggtacacggtggtgatcctccggtgcagggaccggccgcggctgctgttcgacacgctgtgcgcgctcaccgacctgcactacgtcgtcttccacggcaccgtcgacgccgagggcggcagcgccaaggaggcctaccaggagtactatgtccggcacgtcgacggccacccggtgcgctgcgacgccgagcgcctccgcctcgtccgctgcctcgaggccgccgtcgagcgccgcgcctccgacgggctggagctggaggtgaagacggaggacagggcggggctcctgtcggagatcacgcgtgtgttccgggagaacagcctgtcgatcatccgggcggtgatcaccaccaaggacggcgaggccgacgataccttctacgtctccgacgcctacggcaaccccgtcgacggcaaggccatggaggcgctcggcgagcagctcggccacgccgtgctgcgcgtcaagagcaacggccgcgccgccatcaaccgcgccgaggacagcggcggcggcggcgcggcggccatcattggcaacctgctcaagggctcgttccaggggttcaggctcatcagatcctactcctga</cdnaseq>

Protein Sequence

<aaseq>MARSGGELVVVEEDDEYAKLVRRMNPPSVVIDNDSCDSATVIRV DRVKKHGILLEAVQVLVDLNLVITKAYISSDGNWFMDVFNVTDQDGNKVQNKEVTDCI KKCLESEDYLVLPASSPAGGAAPSEETTCIELTGTDRPGLLSEVCAVLASLRCNIVNA EVWTHDRRAAAVIQITDEATGLPVRDGGRLSQLQELLGNVMQGDGDGGGDSRKGSTAV SLGAANAERRLHRLMLDDGDAGRCGEERGGVAAAKAKAKVVVMDCTERRYTVVILRCR DRPRLLFDTLCALTDLHYVVFHGTVDAEGGSAKEAYQEYYVRHVDGHPVRCDAERLRL VRCLEAAVERRASDGLELEVKTEDRAGLLSEITRVFRENSLSIIRAVITTKDGEADDT FYVSDAYGNPVDGKAMEALGEQLGHAVLRVKSNGRAAINRAEDSGGGGAAAIIGNLLK GSFQGFRLIRSYS</aaseq>

Gene Sequence

<dnaseqindica>382..464#2005..2050#2186..2300#2723..2790#2892..3518#3605..3709#3793..4140#aagcgtcctctggagaaaggaaaatccatatccaattgagaggaagcagagggggagagaggaaggaggcaggaggctgccataactccgcccgcaacctccgctctctgtctcgcggtgacctcgtacgtacccccgcgctagctgttaatggaaacgccgcgccctctcctcctcccttcccatcatcctcccgcggcctcgccctcctcttcttcttcttcctcctccttcccctacagatagcgaagcgagatggattgttgtagataggatacgcatactgtggctcttcccccctagcttcttccatctcctcgatcgtgttcagtttgattttggttttcgcttgtcactgtgtgggtggtggtgttgttggccatggcgaggagtggtggggagttggtggtggtggaggaagacgatgagtacgccaagctggtcaggaggatgaacccacccaggtacgtatgctgcacctgcacgcactagtatcatcgattcatcatcgtgcagacacccccaaattcaatactccatatcgatttggtcctttcttttcttcttttcttttcatgtctctagtagatgattaatttgcgcttcatatgtttggatttgccgcgtagaaacgtttgtctttttgtgctgttttatttgttttttactccctccgtcctataatataagggattttgagtttttgtttgcaacgttttaccacttgtcttattcaaatttttaaaattattatttattttatttatgacttactttattatctgcagtactttaagcataacttttcattttttatatttgcaaaaaaaaatttaaataagacaagtggtcaaacgtaaaaacttaaaatctatattgtgggacggacggagggagtactagcggagcagcatgatgagagattgttggctttgcttttctttttcttttttttttgggttttgaaaacaaatattggtgtattatccttcaccagtgttgatggtaatgttgtgtagttaatggctgcgccattttcgccaggattttcgcgcttaaacatctcttgcaatgttcatggaatccattgctatgaatcggaagcaaatcctgtggattaaaataacatcaaactcctgtatgctctgcctgagtgcctgttacctactccgtagtgtattctccatttcctttctcatcatcaaaccatttcatcacttccaaagttataggacaagtttttgaaagagaattttcaaagctgaagttgtcagtaataacacaaatatcttctgcaatttactaaaaaaaatctctgaaaaaataaaataaaatctcattctgttttgatgagcttggccatgttgatctttattctcctctgccttttgctacctcagtccatgttctccaaagctgagactgtccttgttggattcccctctcctttttggcagaggaaaggtggcttatctggaatctgtgattcttatgctgcaaccctagtaaagaggctttacaatccaactgtccctctaaccaacttacaaatggactgttccccatttaataaatggattccaaattagcttgtatcctagtattgtagtatatgagttgttgctaattcattgccaccatatatgaatattctgtgtgcgtgtctctattataacatgagcttaattatgtggatatttcacctaaaccgagcctatcaaaatgttttagcatctcattgatatattccatatgagtgggacattcagtccaccattctgcaaatagaaaagtagtgcctctctgaattatgcactcaactcaaaagatcaactgccgagcgaaatatttatcggagaaaaggtgaaagacttcaacaaagtttataactttttaaaaacttcatgaaaaattatctagttgagtggaatttgattatgtcaaggcatcttttgaagaccataagaggctcatagtataactggtgactgaattttcttgcagtgttgtgatagacaatgactcgtgcgacagtgcaactgtcatccgggtgagatagtgcttccctttcggactggaccatgctaattaaatatctaactaacctctctactctttgtactactactagcttagcatagttattagtaatttgacaaagcttggacttttctgtcttgcccaggttgatagggtcaagaagcatggcattttactggaggctgttcaagtacttgtggacctcaacctcgtcatcaccaaggcttacatttcttcagacggcaactggttcatggacggtataacaactgattagccctcttaatctcttggtttgataacatcttttccttggaaaaacatgtactacctccgatttcattttaattaatattttagataatgatatggtctataaattatatctttgatcttatttttctattataatatatacaataaataaatatatgtttatttttattacagtgctttgaaagataaatctatgtatgttgttctagtttctttaaactaaatatttttagttattaatggttaaaattataaaagttttaccttaatattgtctaaaacgttaattattatagaatccaaaacgttaattattatagaatcggagctagtagggagcagtaattcagtaaagtttggttgacttctcttcttccctttctcacttggctcatgtcatgttcagtgttcaatgtgaccgatcaggacggcaacaaggtgcagaacaaggaggtcactgactgcattaagaaagtataattactagttattgcgtgcttaattactactgataatgatagctcttgcttgctaaaggtgataattactgaccttggtaatgtgttacgctacagtgcttggagtcggaggattacctcgtgctgccggcgagctcgccggccggcggcgctgcgccgtcggaggagaccacctgcatcgagctcaccggcaccgaccggccggggctcctctccgaggtgtgcgccgtgctggcttcgctgaggtgcaacatcgtgaacgccgaggtgtggacgcacgaccgccgcgccgccgccgtcatccagatcaccgacgaggccaccggcctccccgtccgcgacggcgggcggctgtcccagctgcaggagctcctcggcaacgtcatgcagggagacggcgacggcggcggtgacagcaggaagggcagcacggccgtgtcgctgggcgccgcgaacgccgagcggcgcctgcacaggctcatgctcgacgacggcgacgccggccgatgcggcgaggagcggggcggcgtggcggcggcgaaggcgaaggcgaaggtggtggtgatggactgcacggagcggcggtacacggtggtgatcctccggtgcagggaccggccgcggctgctgttcgacacgctgtgcgcgctcaccgacctgcactacgtcgtcttccacggcaccgtcgacgccgagggcggcagcgccaaggaggcctaccaggtaatgccatgccattgcctgaaccaatcacctaacgagctcacctcaccaccacctcatggccgtcggctgtggttgcattgcaggagtactatgtccggcacgtcgacggccacccggtgcgctgcgacgccgagcgcctccgcctcgtccgctgcctcgaggccgccgtcgagcgccgcgcctccgacgtacgtgcccgccatcagcattcacggcatcgtcattgccattgtcactgatcgtaggcaaggtgttcgatcaaatgttgtaggggctggagctggaggtgaagacggaggacagggcggggctcctgtcggagatcacgcgtgtgttccgggagaacagcctgtcgatcatccgggcggtgatcaccaccaaggacggcgaggccgacgataccttctacgtctccgacgcctacggcaaccccgtcgacggcaaggccatggaggcgctcggcgagcagctcggccacgccgtgctgcgcgtcaagagcaacggccgcgccgccatcaaccgcgccgaggacagcggcggcggcggcgcggcggccatcattggcaacctgctcaagggctcgttccaggggttcaggctcatcagatcctactcctgaaaaaaaaaattgctcattttctcaccaagaagatcagaaacacgaccttgttcatacataagaatctgacgactttagcttaggaaataaatggagaatggggtgatgtaaatagtcttgtggatatctgaaaacgccattgcttcttcagcatcatacacttaggttaaggttaacttgcattgtacatataatttgtaaagtggttctcatct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0533600, RefSeq:Os08g0533600