Os08g0535100

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Revision as of 13:10, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0535100| Description = Conserved hypothetical protein| Version = NM_001068888.1 GI:115477514 GeneID:4346152| Length = 3117 bp| Definition ...")
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Gene Name

Os08g0535100

Description

Conserved hypothetical protein

Version

NM_001068888.1 GI:115477514 GeneID:4346152

Length

3117 bp

Definition

Oryza sativa Japonica Group Os08g0535100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26801281..26804397

Sequence Coding Region

26801445..26801839,26802302..26802548,26802654..26803166

Expression

GEO Profiles:Os08g0535100

Genome Context

<gbrowseImage1> name=NC_008401:26801281..26804397 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:26801281..26804397 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatctgcaccaacagtctcgtgcgcattgagtgccgctccctcaacggccttcttgctttcctccacaacctcttccctgcattatctgaacacgatgccatgatgtaccttttccactccaatgctaaccttgaacaagtcacttttagagcaatgtgcgatcatgatatatcctgctctcatgaggatgcttacaaggcagcagcagacgcggcatggcatcctcatcctgatgctcaagctgaattcgctgtgtcaacccatccaatgctgttgcccattgacaagccatcgctagcggttagccgcacactcacttccaatgaggtggagctcatttcaagatatttttcacagaaatcataccctgccaaatctgtgccatcagttcctgaattggttcccagagctgacgagttggtcaaacgcagccagcaaaatttcatggctaatcaatatttcatctgcagaaaggtgaaagctgcattgaagagatatgcaaaagaaaagggaaccgagtatgaacttcatgtcatctgcggtacaaattttgatgtacctgagaatggcagatatggttactttcggaatcgcaaaggatttccatatgctcatgtgaattttctggcaagaccaaagggttcacagcgtgataacactgctcctagtcttttcttcctggagtgcagcaatggtgaagaagatattggtacactattttcatgctgcgctgaactagagtcgcctacagattctggtaggtgctttcattgtgagtgcaaaggaactaagattgtgcatccagctattggaacataccgagggcgtgaaacagacttcgaggaaatgtcttgtgggaaacaggaaattgacagtaaaggacttattatctctgagaagatggctattgagtttgtgggtttatgtgaggatgacagtatctattttgatccttctaaggactatgacttcgctcttggcttgaacaacttagttagggaggatgatgaagctcttgaagagcttcacagagacattgccgagtgcgagagaatgaaagtctgtgacatgtcctgtgagccagatctgttggcggaaatcacagaggatgttttgcaagattgtcaagggcatcttgttccccagtgctaa</cdnaseq>

Protein Sequence

<aaseq>MICTNSLVRIECRSLNGLLAFLHNLFPALSEHDAMMYLFHSNAN LEQVTFRAMCDHDISCSHEDAYKAAADAAWHPHPDAQAEFAVSTHPMLLPIDKPSLAV SRTLTSNEVELISRYFSQKSYPAKSVPSVPELVPRADELVKRSQQNFMANQYFICRKV KAALKRYAKEKGTEYELHVICGTNFDVPENGRYGYFRNRKGFPYAHVNFLARPKGSQR DNTAPSLFFLECSNGEEDIGTLFSCCAELESPTDSGRCFHCECKGTKIVHPAIGTYRG RETDFEEMSCGKQEIDSKGLIISEKMAIEFVGLCEDDSIYFDPSKDYDFALGLNNLVR EDDEALEELHRDIAECERMKVCDMSCEPDLLAEITEDVLQDCQGHLVPQC</aaseq>

Gene Sequence

<dnaseqindica>2559..2953#1850..2096#1232..1744#agggggagagagagggagggaccgcgcggcggcgccgccccggtggaatccctgccctgatgtcggcgacagcgaagggcggcagcgatagctccgccggaagctccggatccaccccctcgtcgccggcgacaggcaggggcggcagcgatagctccgatgccaaccagccctcgccggtgaaggagcggggtgttgtgctgtcggagctgctcgggcacatccatgggtactacaaggctgcgctcggccggctcccggtggaggagacgccggcgctcatcccgcccctccttgacgccggcgtctgcttcggcctcatggatcccatctccaacatcatcgtcaacaccgtctccgaacccctcctgcccgactgcacggcgtcggaggaggaagaggaggatgggaagtcgaggaagaggaagagggggagagacgaggcaattttgtccgagatcgccgcggatgccagctgcatccgctgctttcctccgaggatggggcggtgcgagacctcgccggagcggaggaggaacgtccccgtcgcgcagcgctcgctcgagggcctcgtcaccttcctcatctgctacttccgccacctccccgtctcggaggccttgcactacctcctgctcaccaaggccgacctgctcgccgccgtccacctcatcgagtacactcggggaattggaggcaggctgttcccgatctcctccccaaccacagaggttgccctccgctgcgctgccatctccgcctcgcacccagacccgccagcatttgcagccagatcactctcgctagcttcgcgtcttggagatcagcctcctcgcagattctcaccgatggatgctacctgtctcttgatgccatccaccgcctccacgaatttctccaggaacctctcaaggagccacccgacttcccgaaacctgtccggcaggcggctcttcgcttgaatcactacatcaaaggaatcagcagcttgaacaagttcccccatgaattcacagatactctgagaactcttctcctggagaaaatccatgtgttgtacctcaaagcgatcgcgcggcttcccagggatgatttgcgcagacgctatcaccatagcctcctcaaggcaggccattgctttggtcctgctaatgaccgtgtctccaacatcatcctcaacaccatctggtacgacaccacattccctccacatgaggagcttaagctggacatgatctgcaccaacagtctcgtgcgcattgagtgccgctccctcaacggccttcttgctttcctccacaacctcttccctgcattatctgaacacgatgccatgatgtaccttttccactccaatgctaaccttgaacaagtcacttttagagcaatgtgcgatcatgatatatcctgctctcatgaggatgcttacaaggcagcagcagacgcggcatggcatcctcatcctgatgctcaagctgaattcgctgtgtcaacccatccaatgctgttgcccattgacaagccatcgctagcggttagccgcacactcacttccaatgaggtggagctcatttcaagatatttttcacagaaatcataccctgccaaatctgtgccatcagttcctgaattggttcccagagctgacgagttggtcaaacgcagccagcaaaatttcatggctaatcaatatttcatctgcagaaaggtgaaagctgcattgaagagatatgcaaaagaaaaggtgggtagctcatgtactcgtcttccaattcttttgtttttattatagcaaatattaatactaagtctcgtaaatatctttactgagctgtctgtcttgttttagggaaccgagtatgaacttcatgtcatctgcggtacaaattttgatgtacctgagaatggcagatatggttactttcggaatcgcaaaggatttccatatgctcatgtgaattttctggcaagaccaaagggttcacagcgtgataacactgctcctagtcttttcttcctggagtgcagcaatggtgaagaagatattggtacactattttcatgctgcgctgaactagagtcgcctacagattctggtatgattttgcacttgcactacagttaaatatgagtcgtatttcctcgagttgtaagataccattgacattgttactttgatgtgccacgatctgcattgtccacatacttggacattagcttcactttgttaatttgagtatttcccctggttcccattctttttagctcacctagaacccacaaataaaaatgggaaggaaccttccattcctgatgaaccctcctagttgttggtttgcagctccagcactaggtactactaatccttggacagcttctgtgtagccaacattattcatgcatctgaagttactagctactactaatccttggacagcttctgtgtagccaaaattattcatgcatctgaagtttaatttgtgtaatgattaaaaagttaattttgatatttttctttctggcttgctgctgagcgttctttattctttcgagaacaggtaggtgctttcattgtgagtgcaaaggaactaagattgtgcatccagctattggaacataccgagggcgtgaaacagacttcgaggaaatgtcttgtgggaaacaggaaattgacagtaaaggacttattatctctgagaagatggctattgagtttgtgggtttatgtgaggatgacagtatctattttgatccttctaaggactatgacttcgctcttggcttgaacaacttagttagggaggatgatgaagctcttgaagagcttcacagagacattgccgagtgcgagagaatgaaagtctgtgacatgtcctgtgagccagatctgttggcggaaatcacagaggatgttttgcaagattgtcaagggcatcttgttccccagtgctaaattgcaatcttatttggtaggctatgttaatcagttatatgatggtgaaatttatttgtctatgctgttatgttatatattcatgtgcacacttaaaagaccagatccattttaatgtgcaatgctaatcgctttgcagctagtctgcaaacttatgtaatgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0535100, RefSeq:Os08g0535100