BGIOSGA002718

From RiceWiki
Revision as of 18:19, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA002718

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002718, complete gene.

LocusTag

OsI_00276

Ensembl Transcript ID

BGIOSGA002718-TA

Ensembl Protein ID

BGIOSGA002718-PA

Length

2640

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2228855..2231494

Sequence Coding Region

2228855..2229066,2229716..2229878,2230010..2231494

Genome Context

<gbrowseImage1> name=IndicaChromosome01:2228855..2231494 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:2228855..2231494 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCTCGCCACCTTCCCGTGGCTCGACTTGATGGCGTGGAGAATGGATGAGTACCTGTCATGGATCCGCCGGAGGCTACTCCGCGTCGCCACGTCACTGAACGGGTTGCTCCGCACGGCGGCGAGCAGCGCCGCCGCCGTCATCGCCGCGGCACCACCGGTAGCGGCGACGCTGTCAGAGTTGGTGGCGAGGAAGCTGTCCATGGACAGAAGGTTGCTAACAATCTGGTATCAGAGCTACTCGGTTCGTGGGATTTCTCATCATGGAGGTCTTAGGAAGGCAGAGGTGCAAGGTGGAGGAAGAATTGGGCAGGGGGGTGTTCAAGAATCTAGCACACACAACCTGTTCGACAGAATGCCAAGCCAACATAAGACAAGAGGGAAGTTCAATCAAATACTACAGAAGTTGGAGGAGGTAGAAGCTCGTAGGAGCAAGGCTGCCGAGAAGACAATTGCAGCCATCAAGGCAACCACCGCTGTCCTCAAGGCTAAATCACCTACAGCACCCATGGCACCACCTACTCCAGCGCCTACCAAGTGTTTGACTGAATGCCCCAACAACAACCTCACTTGGGCGACGGTGAGTTCAAGTCACATTACTGAGGATACTGCTCCAACAGCTGCCTGGGAGCTAGGAAACAACAAGCACAAGGGCCACGCCTCATGCATCGTCACCAAGGACTCACCCGAGGTCACGCCCACCATGTGTTCGACGAAATGCTCCGGTCCTACCGTCGAGCCTGATCTCACTGTGGCTGCAGTGGTTACGTCCGCCACCACTGCCGCGGCCTCTATGGAGTTGGCAGCTGCTGGGAACGCAATCGGTGCCACTTACATCAACAATCTTGACCACCCCAAGGTGACGCATGCTAAGTGTTCGATGTCTGGCTCCGGCGTCAAACGGGGCACTGAACAAGTTGTTCTTGCATTCCCACTCATGGCTAGCCCTGTGGAGTTCACGACATCATTGGTGGAACCATCTCCACCCACCGGGCTGAAGCTTGGTGCTGCCATCTGCGTGGGAGATCAGGTGCCTATGAAGTGTTCTATGAAATGTACTGAGAGTGACAACAAGCCACTGATGGAACACCCCAAGAGAAACCCATGGCCACCTGCTTGGTTAGGATGGAAGAAGTGGTATGTGTCCTGGACTGCAGTCAATTATTCTGAGATGAGATTTTATTTCATTCCACCGTGGCCACCGCCACTTAAAGTAGGTTGGCTTGCATTGGTATTTTCTAAATTTGGAGCAGCTCATACTGACATGATGGATATAATGTTGCATTGGACTGATATGAAACCATGGCCTCCACCAAATCAAAATTTGAGAAGTATCATGGTGCATCTATTTGCTTGGAAGCATTGGAAAGTTAGTGTAGAAGTGAGTCTCTTTGCTTGGAACACTAAGCAATACATGAATAGTGTGCTACTTATTACAGTTGGCACCAAATGGTTGATTCACTCTGCAGTCAAGGACTGTTTTCTCCAAGGCAAGCCATTCAAACTTGTGGACCCATTGGAACTCATGCAAGTAATTTTGGTGCTATTAGTGCGGGATCCAGATGTTGAGATGTTTCAGATTGGCAGCTACTCTCTACAACCAGAAAATTATCAATTAACTAACTACTTGGTGGCAAGACTATTGAAGCAAGGTAATCTGAAAAAGGTACTCGATGGTGTGGATCATAGCAAAAACATTAAGAAGAGTGATGTTGATGTTGGCGAGGACAATCCTGGTAATATTAGTACTGCAGCAAAAATGTTCATTGATGTCTTGGTATCAAGGAAGATTCAGAGATGCTATGTCCATCAGCCCAGTACATTGATAATTGGTCTACTAAGCTGCTGGATGAGATAA</cdnaseq>

Protein Sequence

<aaseq>MALATFPWLDLMAWRMDEYLSWIRRRLLRVATSLNGLLRTAASSAAAVIAAAPPVAATLSELVARKLSMDRRLLTIWYQSYSVRGISHHGGLRKAEVQGGGRIGQGGVQESSTHNLFDRMPSQHKTRGKFNQILQKLEEVEARRSKAAEKTIAAIKATTAVLKAKSPTAPMAPPTPAPTKCLTECPNNNLTWATVSSSHITEDTAPTAAWELGNNKHKGHASCIVTKDSPEVTPTMCSTKCSGPTVEPDLTVAAVVTSATTAAASMELAAAGNAIGATYINNLDHPKVTHAKCSMSGSGVKRGTEQVVLAFPLMASPVEFTTSLVEPSPPTGLKLGAAICVGDQVPMKCSMKCTESDNKPLMEHPKRNPWPPAWLGWKKWYVSWTAVNYSEMRFYFIPPWPPPLKVGWLALVFSKFGAAHTDMMDIMLHWTDMKPWPPPNQNLRSIMVHLFAWKHWKVSVEVSLFAWNTKQYMNSVLLITVGTKWLIHSAVKDCFLQGKPFKLVDPLELMQVILVLLVRDPDVEMFQIGSYSLQPENYQLTNYLVARLLKQGNLKKVLDGVDHSKNIKKSDVDVGEDNPGNISTAAKMFIDVLVSRKIQRCYVHQPSTLIIGLLSCWMR</aaseq>

Gene Sequence

<dnaseqindica>1..212#862..1024#1156..2640#ATGGCCCTCGCCACCTTCCCGTGGCTCGACTTGATGGCGTGGAGAATGGATGAGTACCTGTCATGGATCCGCCGGAGGCTACTCCGCGTCGCCACGTCACTGAACGGGTTGCTCCGCACGGCGGCGAGCAGCGCCGCCGCCGTCATCGCCGCGGCACCACCGGTAGCGGCGACGCTGTCAGAGTTGGTGGCGAGGAAGCTGTCCATGGACAGGTAGTTGCTCTGCGCGTTCTTGATGTTCGTCAGCAGCTACTTGCAGATCTCCGACGCCTCGTCGCTGGCATTGAAGTAGCCCGCCATCGCCAGCTCGATCTCTGACGACGTCCTTCGGTGCATCATTCGCTGCAATTCCGTGGGGACGACGTCTTTGGTGCAGCGTGCTGATGTACTCCTCAATGCTCATGGATTCCATGGCTGTGTTCCAATATAAACCAGAATTTCTCAGCATTTGATGGCAAAATGAACTGACACACAAGAACATACAAACAGATGACGAAAAGCTCAATGTTTGTTAGGAATTGGGCCGGCTGCACTACGACCCAACACAGTGAGTAGCCCAATCCTTGGCCCAAGCAAGCCCAACAGAGAGCTAGAAAGGAAGGGATGCTACACTCTCAGGAAAAGGAACAGAACAGAGATCAAACAGGCATCGGCGGCTTCGGCGGCGGCGGCGACTTGGTTCAGGCTGAACCTTGTCGATCTTCCTCTCTTCCTCTACTACCTCTCTTGCTACTATCTCTACTGCAGCTACTAGGGCAATCCAGTCTCTCTATTAGCTTGTATCCCTATTCTTATTCTACCTTGTTCTAGTCAAACACTTCCAAGTTGTATTGAGAACTACCGTTGTTTGATTCTAGTGAAGAAGGTTGCTAACAATCTGGTATCAGAGCTACTCGGTTCGTGGGATTTCTCATCATGGAGGTCTTAGGAAGGCAGAGGTGCAAGGTGGAGGAAGAATTGGGCAGGGGGGTGTTCAAGAATCTAGCACACACAACCTGTTCGACAGAATGCCAAGCCAACATAAGGTGTTCAAGGATGATGAAAGGATAGCAGAGCCCGTTCCCATCAAGTCCACCATGAACAAGGAGGGAATATCCATGGACGAAGCTTTAGATCGGATTCTTGAGAGGTTTGAGTTGATGGAGGCCAACCGTAGACAAGAGGGAAGTTCAATCAAATACTACAGAAGTTGGAGGAGGTAGAAGCTCGTAGGAGCAAGGCTGCCGAGAAGACAATTGCAGCCATCAAGGCAACCACCGCTGTCCTCAAGGCTAAATCACCTACAGCACCCATGGCACCACCTACTCCAGCGCCTACCAAGTGTTTGACTGAATGCCCCAACAACAACCTCACTTGGGCGACGGTGAGTTCAAGTCACATTACTGAGGATACTGCTCCAACAGCTGCCTGGGAGCTAGGAAACAACAAGCACAAGGGCCACGCCTCATGCATCGTCACCAAGGACTCACCCGAGGTCACGCCCACCATGTGTTCGACGAAATGCTCCGGTCCTACCGTCGAGCCTGATCTCACTGTGGCTGCAGTGGTTACGTCCGCCACCACTGCCGCGGCCTCTATGGAGTTGGCAGCTGCTGGGAACGCAATCGGTGCCACTTACATCAACAATCTTGACCACCCCAAGGTGACGCATGCTAAGTGTTCGATGTCTGGCTCCGGCGTCAAACGGGGCACTGAACAAGTTGTTCTTGCATTCCCACTCATGGCTAGCCCTGTGGAGTTCACGACATCATTGGTGGAACCATCTCCACCCACCGGGCTGAAGCTTGGTGCTGCCATCTGCGTGGGAGATCAGGTGCCTATGAAGTGTTCTATGAAATGTACTGAGAGTGACAACAAGCCACTGATGGAACACCCCAAGAGAAACCCATGGCCACCTGCTTGGTTAGGATGGAAGAAGTGGTATGTGTCCTGGACTGCAGTCAATTATTCTGAGATGAGATTTTATTTCATTCCACCGTGGCCACCGCCACTTAAAGTAGGTTGGCTTGCATTGGTATTTTCTAAATTTGGAGCAGCTCATACTGACATGATGGATATAATGTTGCATTGGACTGATATGAAACCATGGCCTCCACCAAATCAAAATTTGAGAAGTATCATGGTGCATCTATTTGCTTGGAAGCATTGGAAAGTTAGTGTAGAAGTGAGTCTCTTTGCTTGGAACACTAAGCAATACATGAATAGTGTGCTACTTATTACAGTTGGCACCAAATGGTTGATTCACTCTGCAGTCAAGGACTGTTTTCTCCAAGGCAAGCCATTCAAACTTGTGGACCCATTGGAACTCATGCAAGTAATTTTGGTGCTATTAGTGCGGGATCCAGATGTTGAGATGTTTCAGATTGGCAGCTACTCTCTACAACCAGAAAATTATCAATTAACTAACTACTTGGTGGCAAGACTATTGAAGCAAGGTAATCTGAAAAAGGTACTCGATGGTGTGGATCATAGCAAAAACATTAAGAAGAGTGATGTTGATGTTGGCGAGGACAATCCTGGTAATATTAGTACTGCAGCAAAAATGTTCATTGATGTCTTGGTATCAAGGAAGATTCAGAGATGCTATGTCCATCAGCCCAGTACATTGATAATTGGTCTACTAAGCTGCTGGATGAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002718