Os09g0442600

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Revision as of 07:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0442600| Description = Similar to RSH2| Version = NM_001069826.1 GI:115479394 GeneID:4347182| Length = 2972 bp| Definition = Oryza sativa ...")
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Gene Name

Os09g0442600

Description

Similar to RSH2

Version

NM_001069826.1 GI:115479394 GeneID:4347182

Length

2972 bp

Definition

Oryza sativa Japonica Group Os09g0442600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17109055..17112026

Sequence Coding Region

17109784..17109811,17109839..17110020,17110477..17110937,17111040..17111198,17111276..17111627
,17111722..17112015

Expression

GEO Profiles:Os09g0442600

Genome Context

<gbrowseImage1> name=NC_008402:17109055..17112026 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17109055..17112026 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>attgcttctgcatcagtctcttatcttggggcgagtggcgatccatacttgcaacattgtgtagagacagccgtgcttctggccaatattggggcgaattcgacggtcgtctccgccgggcttctgcacgacaccattgacgattcattcattgattatgatcacatctttcacatgttcggagccggcgtggccgatctcgttgagggggtctcaaagttgagccacttgagcaaacttgctcgtgataacaacacagcaagcaggattgttgaagcagatcgattgcacacaatgcttcttgcaatggctgatgcacgggcagttctaataaaattagctgaccgtgtgcataacatgaaaactttggaagctttacctcttggtaaacaacaaagatttgctaaggagaccatggagatctttgttcctttggctaatcgattagggattgccagctggaaagaccagttggaaaatctttgcttcaagcatctgaatccagaagagcacaaggatctatcatctaaactaaccaaatcctttgacgaagtgctaatcacatctgctgtggacaaactagatagaggtctgagggatgcaggcctctcatatcacaatctttctgggaggcacaaaagcctatacagtattcacaacaagatgctaaagaagaatttgacaatggatgagatccatgatatccatggcctgcgtctcgtgtttgagaaggaggaagattgctatcgagcacttgatgttgttcatgaactatggccccaagttcctggaagatttaaggactacatatctcgtccaaaattaaatgggtatcgatcattgcacactgttgtcatgagcgagaatgtccacccatttgaagtccagatccgtacaaaagagatgcacctgcaagctgagtatggattcgcagcacactggaggtacaaggaaggcacctgtaggcactcctttgtactccagatggtggaatgggctaggtgggtgcttacatggcaatgtgaagcaatgaacaaagaacgacctgcatctctaggcgacagtgatgcaattaggccaccctgtccatttcccatgcattcagaagactgcccttactcatatactcggcaatgcgaccatgatggaccgatatttgtcatcctactggaacatgacaagatgtctgtgcaagaattccaagcaaactcaactgtaatgaacctcatggatcgagttgggaccaacactccaagatggagtccctaccgcatccccatgaaggaagatctgcgaccgaaggttaaccacgagcccataagcgatctgaaccggaagctcagcatgggggatgtggtggagctgacaccggcccttcctcacgagtcgctccccaattaccgggaggagattcagcgcatgtacgaccgtggcggattcgccctcgccacccggggtggcagctcgaggcggtga</cdnaseq>

Protein Sequence

<aaseq>IASASVSYLGASGDPYLQHCVETAVLLANIGANSTVVSAGLLHD TIDDSFIDYDHIFHMFGAGVADLVEGVSKLSHLSKLARDNNTASRIVEADRLHTMLLA MADARAVLIKLADRVHNMKTLEALPLGKQQRFAKETMEIFVPLANRLGIASWKDQLEN LCFKHLNPEEHKDLSSKLTKSFDEVLITSAVDKLDRGLRDAGLSYHNLSGRHKSLYSI HNKMLKKNLTMDEIHDIHGLRLVFEKEEDCYRALDVVHELWPQVPGRFKDYISRPKLN GYRSLHTVVMSENVHPFEVQIRTKEMHLQAEYGFAAHWRYKEGTCRHSFVLQMVEWAR WVLTWQCEAMNKERPASLGDSDAIRPPCPFPMHSEDCPYSYTRQCDHDGPIFVILLEH DKMSVQEFQANSTVMNLMDRVGTNTPRWSPYRIPMKEDLRPKVNHEPISDLNRKLSMG DVVELTPALPHESLPNYREEIQRMYDRGGFALATRGGSSRR</aaseq>

Gene Sequence

<dnaseqindica>730..757#785..966#1423..1883#1986..2144#2222..2573#2668..2961#ccatgtcgttgccggcgatttccctgtacaccagcccaccaccgggcgccgtctactcgtcggagttcgatccgagctcccgcggctcgtcgccgccctgctccaccgcgccgccgtccacctctcaccgcccgcccgccgccgcgggcgggctgtcctgcctcttctcctccccggccgcggcggcctcgccgcctcgtgccccgccgcacgacgagctcggtgcgctgtggcaagatagatccgacgagcccgccttcgccggcggcggcggcggctactcgtcctcgccgctcaagtggcgtgacctccaccaccaccatcaccacagccccgtgtcggtgttccagggcccgtcgtcctctccggcggcctcccgcagcccgccggcgtcgtggctcgccggccgcgaccgcgaccgcgagcgcctcttcgccggcttcgtgcgcaacgcgctgggctcctgcgttgactacgccccggcactcagcccgcggtcggaggtcggcggcggcgagctcgcgttcgagctcgacgagaacctcgcggaggcgagccccgcctgcgagccgtgcgcccgggagctcctcgccggcgcccaggctcgccaccgcatcttccacgaggagctcgtcgtgaagaccttcttcgaggccgagaaggctcaccgtggccaggtcaaaaccgcgagctacacaatctttagctattggttcttggaacacttgaattgcttctgcatcagtctcttatcttgttcagtttgtgatttgtgattagacccgggcgagtggcgatccatacttgcaacattgtgtagagacagccgtgcttctggccaatattggggcgaattcgacggtcgtctccgccgggcttctgcacgacaccattgacgattcattcattgattatgatcacatctttcacatgttcggagccggcgtggccgatctcgttgagggggtacgtgttccagtttccttggattttgataattgttcccagtggatcggttaatgagttttataatatgaacattgaacttattttggattatcacgctgctgacaggaccaacttgaattatttgatctgaattaccatggtttatccctttatatacttaaagtcaattatcatgtgtctgcattttttctaatgtaagacaactatattttacatccctcactaataaaggttcctccatttggggtcaatgtacgacttctatgatatgatttaagtagcttaggtactaagtctagtgcattaaaaggtcactttctctgtagcattatttctcatatgatgaatttgtgacaattggcaatatatttagtgaaatacgtcatagcattgtgtacagagaaaatagattgtattgttgcaaaactaatggttgatatctaatatgttcaggtctcaaagttgagccacttgagcaaacttgctcgtgataacaacacagcaagcaggattgttgaagcagatcgattgcacacaatgcttcttgcaatggctgatgcacgggcagttctaataaaattagctgaccgtgtgcataacatgaaaactttggaagctttacctcttggtaaacaacaaagatttgctaaggagaccatggagatctttgttcctttggctaatcgattagggattgccagctggaaagaccagttggaaaatctttgcttcaagcatctgaatccagaagagcacaaggatctatcatctaaactaaccaaatcctttgacgaagtgctaatcacatctgctgtggacaaactagatagaggtctgagggatgcaggcctctcatatcacaatctttctgggaggcacaaaagcctatacagtattcacaacaagatgctaaagtatgttacaaggctttctgtttgcattatttacggttttaaaacttgacgatgaaccacatttttctttctttctgctaactggtcttcgcacattatcaggaagaatttgacaatggatgagatccatgatatccatggcctgcgtctcgtgtttgagaaggaggaagattgctatcgagcacttgatgttgttcatgaactatggccccaagttcctggaagatttaaggactacatatctcgtccaaaattaaatgggtacgctgagttgaacattgatatgaccattcttcattcactttctgctatactttgcactgatttgctttctacaggtatcgatcattgcacactgttgtcatgagcgagaatgtccacccatttgaagtccagatccgtacaaaagagatgcacctgcaagctgagtatggattcgcagcacactggaggtacaaggaaggcacctgtaggcactcctttgtactccagatggtggaatgggctaggtgggtgcttacatggcaatgtgaagcaatgaacaaagaacgacctgcatctctaggcgacagtgatgcaattaggccaccctgtccatttcccatgcattcagaagactgcccttactcatatactcggcaatgcgaccatgatggaccgatatttgtcatcctactggaacatgacaaggtgagcgcagtctccagttaaacccattcctagaaaattgcaaccgtatcgcctttgattatagttctcactaagtttgtccctgtgattccagatgtctgtgcaagaattccaagcaaactcaactgtaatgaacctcatggatcgagttgggaccaacactccaagatggagtccctaccgcatccccatgaaggaagatctgcgaccgaaggttaaccacgagcccataagcgatctgaaccggaagctcagcatgggggatgtggtggagctgacaccggcccttcctcacgagtcgctccccaattaccgggaggagattcagcgcatgtacgaccgtggcggattcgccctcgccacccggggtggcagctcgaggcggtgacagtacttcga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0442600, RefSeq:Os09g0442600