BGIOSGA002941

From RiceWiki
Revision as of 18:20, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA002941

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002941, complete gene.

LocusTag

P0498B01.25

Ensembl Transcript ID

BGIOSGA002941-TA

Ensembl Protein ID

BGIOSGA002941-PA

Length

2506

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5560727..5563232

Sequence Coding Region

5560727..5560812,5560966..5560996,5561125..5561646,5562777..5563232

Genome Context

<gbrowseImage1> name=IndicaChromosome01:5560727..5563232 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:5560727..5563232 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATAGCAGCAGCTGGATCCATGGCTACACAAACGCCAACGCCACCGGCGCCAACAGCGGCTTCATGTGCGGCTACGCTGCCAGCCCAGTAGAGTTTCCGCAGCAGCAACAGCTGATCAGCATGCAGATGGGCATGGATGACGAGTCGGCGGTGTACGACGGCGCCTCCATGGTGGGCGACCTCCTCATGGCTTCCTCGTCGGCGCACCACGCCGGTGCCGGCAGCTTCCAGTACTCCTCGTCGACGACGTCCTCCTCCGCCTCCTTCCGCTCCGCCTCCGTCTCGTGCATCCCGGAGAGCTCGGCGGCGGCGGCGCCAGAGTTGCCGGCGGCGACCGGCGGCGCGTTCAGTCGCTACGCGCGGCACCTCCGCCCGAGGAGGCCACCCAAGCCGGGAGCGTGCGGGCAGAGGATGTTCAAGACGGCCATGTCGGTGCTCGCCAACATGCACGTGGCGGCGACGTACCGCCGCCAGTACTACTACCAGCAAGCGGCGGCGGCGGCGGCGGCGGCCGAGGCGGCGGCGGCGCCGCCGTCCGACAACCAGCTGCAGCACACGATGTCGGAGCGGAAGCGGCGGGAGAAGCTCAACGACAGCTTCGTCGCCCTCAAGGCCGTCCTCCCTACCGGCTCCAAGAAAGACAAGGCGTCGATACTGATCAGGGCAAGAGAGCACATAAAGTCTCTCGAGTCAAAGCTGTCGGAGCTGGAGGAGAAGAACCGGGAGCTGGAGGCGAGGCTAGCCAGCCGCCCCGCCGCCAAGAACGACAAAGGCGAGACGGCGGCGGCGGAAGCCGGCGACGAGACGAAGCGAGAGGACCTAGTAGAGATCGAGGTGACGACGACGAGCGGCGGCAGCGGAGTGGCGGATGCGGCGGCGACAGGAGGAGATCAAGAGACTTGTTGCACGCTCAACGTGGACTTGCGCGGCGGCGGCGGCGGAGGCATGAGCACGACGGACGTTGTGCTCCGGACGCTGCAGTGCCTGAGAGAGCAGATCGGCGACGGCGCCAGCCTCGTGGCGATGAGCACCAGCGCCGGCTCCGGCGGCCGCCCTCCTAGTGCAAACCTAACATTACAGCTCAAGGTATAA</cdnaseq>

Protein Sequence

<aaseq>MDSSSWIHGYTNANATGANSGFMCGYAASPVEFPQQQQLISMQMGMDDESAVYDGASMVGDLLMASSSAHHAGAGSFQYSSSTTSSSASFRSASVSCIPESSAAAAPELPAATGGAFSRYARHLRPRRPPKPGACGQRMFKTAMSVLANMHVAATYRRQYYYQQAAAAAAAAEAAAAPPSDNQLQHTMSERKRREKLNDSFVALKAVLPTGSKKDKASILIRAREHIKSLESKLSELEEKNRELEARLASRPAAKNDKGETAAAEAGDETKREDLVEIEVTTTSGGSGVADAAATGGDQETCCTLNVDLRGGGGGGMSTTDVVLRTLQCLREQIGDGASLVAMSTSAGSGGRPPSANLTLQLKV</aaseq>

Gene Sequence

<dnaseqindica>1..86#240..270#399..920#2051..2506#ATGGATAGCAGCAGCTGGATCCATGGCTACACAAACGCCAACGCCACCGGCGCCAACAGCGGCTTCATGTGCGGCTACGCTGCCAGGTATATATGTGTTGAATTAAAACATCTTGATGAGATGATCACCGTGCATGACACGATCGATCAACGACAATATCATCTCTGTAAATCGTCTGTTCTTGAGTGGTTTTGGCTGATCAGTTAGTTACCTACTTAAGTTCGTGCTTGCGGCTGCAGCCCAGTAGAGTTTCCGCAGCAGCAACAGCTGGTCAGCTCGCCGATTCAGCAACACCTCAACCAGGCAAGCTTAATTTGCTCTGATCGATCAACAACAATGCATAAAATCAATCAAAATGATAGGATTAATCTAATTTGGTAGGTATATATGGTTTGCAGATCAGCATGCAGATGGGCATGGATGACGAGTCGGCGGTGTACGACGGCGCCTCCATGGTGGGCGACCTCCTCATGGCTTCCTCGTCGGCGCACCACGCCGGTGCCGGCAGCTTCCAGTACTCCTCGTCGACGACGTCCTCCTCCGCCTCCTTCCGCTCCGCCTCCGTCTCGTGCATCCCGGAGAGCTCGGCGGCGGCGGCGCCAGAGTTGCCGGCGGCGACCGGCGGCGCGTTCAGTCGCTACGCGCGGCACCTCCGCCCGAGGAGGCCACCCAAGCCGGGAGCGTGCGGGCAGAGGATGTTCAAGACGGCCATGTCGGTGCTCGCCAACATGCACGTGGCGGCGACGTACCGCCGCCAGTACTACTACCAGCAAGCGGCGGCGGCGGCGGCGGCGGCCGAGGCGGCGGCGGCGCCGCCGTCCGACAACCAGCTGCAGCACACGATGTCGGAGCGGAAGCGGCGGGAGAAGCTCAACGACAGCTTCGTCGCCCTCAAGGCCGTCCTCCCTACCGGCTCCAAGGTAAAATTAATACGTACTCCAGTACATTTGTACGTATTACACGTGCATATATATATATGTGCAAAGCTTCTTTATGAACATTTTCTTCACCACCTTGACTAATACTCTCTCCGGGTTAATAATATTTAGACAGACTAAAAATCATTCGACAGATTTTTCGTAGAAAATTAGTCGGATTTTCAAGCCACCCCACGTGCGGTTCAAATGAAAACATATCAACGTACGTCAGTCACCGGACGTTAATCACTTCAATGATGCTAAAAGAAAAGGAAAAACAAGCAACTTACACCTATTTACATCAATTTACATATGTAATTTTAAAACTTACAGTGTAAGTACACTAAAATTACATATGTAACTTTGGGTACTTGCAATGTAAAACTTCTTTTATAAAAAATACAACGGTATATATAGTCCCAAAAATATCAAATCACACCTCAAACAATTAAGTTAACTACAATGCAACAAAACAACGATGAGTAAAAAATTCCGTACATGTAAAACAAAAACTACACCCGCATGTACTTAAAAATTACATTGTAACTGTAGTGCACTTACATTTTAATCGTGGTATAACAATGGTGTGAGTGGGTGTAGTGTAACTGCATTGAAAGTTTTAAAATGTTAAGTATAGACATAAAGCTGTTGTCCGCTGCTTGCTCAGTTGGTGGAGTGCATGTTGTGGCATCCCGACGTCATGGGTTTGATTCCCTTTTCTAGCGACTTTTTTTTTTCACTCAATGGCACATGCACGTATCTCAAAGTAAATCATGCGGTCAACAAATCGACTGATTTTTAATAGAAAATCTGTCGACAGATATGTAGCAATTCCATAATATGGGTTATTGTTTTGTAAAAGGCACGATCTTAAATAAACAACTTTAACCATTATTTTTCATTATAATATATATAAAAGTGTTAACAAATATATAACCTTATTAAAGTACTTTTTAAGACTACTCTATATACATATATTTACTATAGTTACCATATTTAAAAAATAAATATTTTAAAAATAATTCATAATTAAATACTCTAAAGTTTGATCTCACGCTTATCCAAAACGAAAAATTATCTGACCAAAAAAAACCGTACTATTTGCTTAAAATATTTCTCTTTTTTAATGGCAGAAAGACAAGGCGTCGATACTGATCAGGGCAAGAGAGCACATAAAGTCTCTCGAGTCAAAGCTGTCGGAGCTGGAGGAGAAGAACCGGGAGCTGGAGGCGAGGCTAGCCAGCCGCCCCGCCGCCAAGAACGACAAAGGCGAGACGGCGGCGGCGGAAGCCGGCGACGAGACGAAGCGAGAGGACCTAGTAGAGATCGAGGTGACGACGACGAGCGGCGGCAGCGGAGTGGCGGATGCGGCGGCGACAGGAGGAGATCAAGAGACTTGTTGCACGCTCAACGTGGACTTGCGCGGCGGCGGCGGCGGAGGCATGAGCACGACGGACGTTGTGCTCCGGACGCTGCAGTGCCTGAGAGAGCAGATCGGCGACGGCGCCAGCCTCGTGGCGATGAGCACCAGCGCCGGCTCCGGCGGCCGCCCTCCTAGTGCAAACCTAACATTACAGCTCAAGGTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002941